LOCUS       NM_178561               2608 bp    mRNA    linear   PRI 01-JUN-2024
DEFINITION  Homo sapiens CTAGE family member 6 (CTAGE6), mRNA.
ACCESSION   NM_178561 XM_498461 XM_499498 XM_936776
VERSION     NM_178561.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AC106862.3 and BC043153.2.
            This sequence is a reference standard in the RefSeqGene project.
            
            On May 22, 2019 this sequence version replaced NM_178561.4.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC043153.2 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000470691.2/ ENSP00000474388.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-227               AC106862.3         56666-56892         c
            228-1272            BC043153.2         227-1271
            1273-1273           AC106862.3         55620-55620         c
            1274-2608           BC043153.2         1273-2607
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7q35"
     gene            1..2608
                     /gene="CTAGE6"
                     /gene_synonym="CTAGE6P"
                     /note="CTAGE family member 6"
                     /db_xref="GeneID:340307"
                     /db_xref="HGNC:HGNC:28644"
     exon            1..2608
                     /gene="CTAGE6"
                     /gene_synonym="CTAGE6P"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..2372
                     /gene="CTAGE6"
                     /gene_synonym="CTAGE6P"
                     /note="protein cTAGE-6; putative protein cTAGE-6; CTAGE
                     family, member 6, pseudogene; cutaneous T-cell
                     lymphoma-associated antigen 6"
                     /codon_start=1
                     /product="cTAGE family member 6"
                     /protein_id="NP_848656.2"
                     /db_xref="CCDS:CCDS64790.1"
                     /db_xref="GeneID:340307"
                     /db_xref="HGNC:HGNC:28644"
                     /translation="MEEPGATPQPYLGLVLEELRRVVAALPESMRPDENPYGFPSELV
                     VCAAVIGFFVVLLFLWRSFRSVRSRLYVGREQKLGATLSGLIEEKCKLLEKFSLIQKE
                     YEGYEVESSLEDASFEKAAAEEARSLEATCEKLNRSNSELEDEILCLEKDLKEEKSKH
                     SQQDELMADISKSIQSLEDESKSLKSQIAEAKIICKTFKMSEERRAIAIKDALNENSQ
                     LQTSHKQLFQQEAEVWKGEVSELNKQKITFEDSKVHAEQVLNDKENHIKTLTGHLPMM
                     KDQAAVLEEDTTDDDNLELEVNSQWENGANLDDPLKGALKKLIHAAKLNVSLKSLEGE
                     RNHIIIQLSEVDKTKEELTEHIKNLQTQQESLQSENIYFESENQKLQQKLKIMTEFYQ
                     EDEMKLYRKLTVEENYRIEEEEKLSKVEEKLSRATEQLETYRKLAKDLEEELERTVHF
                     YQKQVISYEKRGHDNWLAARTAERNLSDLRKENAHNKQKLTETELKFELLEKDPNALD
                     VSNTAFGREHAPNGPAPLGQRSSETRAFLSPQTLLEDPLGLSPVLPEGGGRGPRGPGN
                     PLDHQITNERGEPSCDRLTDPHRAPSDTGSLSSPVEQDCKMMFPPPGQSYPDSALPPQ
                     REDRFYSNSERLSGSAEPRSFKMTSLDKMDGSMPSEMESSRNDAKDDLGNLNVPDSSL
                     PAENEATGPGFIPPPLAPVRGPLFPVDTRGPFMRRGPPFPPPPPGTMFGASRGYFPPR
                     DFPGPPHAPFAMRNIYPPRGLPPYFHPRPGFYPNPAF"
     regulatory      2586..2591
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CTAGE6"
                     /gene_synonym="CTAGE6P"
                     /note="hexamer: AATAAA"
     polyA_site      2608
                     /gene="CTAGE6"
                     /gene_synonym="CTAGE6P"
                     /note="major polyA site"
ORIGIN      
        1 agtgttactg cggtgaccgc cagagcagcc tcgacgctat ggaggagcct ggtgctaccc
       61 ctcagcccta cctggggctg gtcctggagg agctacgcag agttgtggca gcactacctg
      121 agagtatgag accagatgag aatccttatg gttttccatc ggaactggtg gtatgtgcag
      181 ctgttattgg attttttgtt gttctccttt ttttgtggag aagttttaga tcggttagga
      241 gtcggcttta cgtgggaaga gagcaaaaac ttggtgcaac gctttctgga ctaattgaag
      301 aaaaatgtaa actacttgaa aagtttagcc ttattcaaaa agagtatgaa ggctatgaag
      361 tagagtcatc tttagaggat gccagctttg agaaggcggc agcagaagaa gcacgaagtt
      421 tggaggcaac ctgtgaaaag ctgaacaggt ccaattctga acttgaggat gaaatcctct
      481 gtctagaaaa agacttaaaa gaagagaaat ctaaacattc tcaacaagat gaattgatgg
      541 cggatatttc aaaaagtata cagtctctag aagatgagtc aaaatccctc aaatcacaaa
      601 tagctgaagc caaaatcatc tgcaagacat ttaaaatgag tgaagaacga cgggctatag
      661 caataaaaga tgctttgaat gaaaattctc aacttcagac aagccataaa cagctttttc
      721 agcaagaagc tgaagtatgg aaaggagaag tgagtgaact taataaacag aaaataacat
      781 ttgaagactc caaagtacac gcagaacaag ttctgaatga taaagaaaat cacatcaaga
      841 ccctgactgg acacttgcca atgatgaaag atcaggctgc tgtgcttgaa gaagacacaa
      901 cggatgatga taacctggaa ttagaagtga acagtcaatg ggaaaatggt gctaacttag
      961 atgatcctct gaaaggagct ttgaagaaac tgattcatgc tgctaagtta aatgtttctt
     1021 taaaaagctt agaaggagaa agaaaccaca ttattattca gttatctgaa gtggacaaaa
     1081 caaaggaaga gcttacagag catattaaaa atcttcagac tcaacaagaa tctttgcaat
     1141 cagaaaacat atattttgaa agtgagaatc agaagcttca acagaaactt aaaataatga
     1201 ctgaattcta tcaagaagat gaaatgaaac tctataggaa attaacagtg gaggaaaatt
     1261 accgaataga ggaagaagag aagctttcta aagtggaaga aaagctcagc cgtgccactg
     1321 aacagctgga gacctataga aagctagcca aagatcttga agaagaattg gagagaactg
     1381 ttcattttta tcaaaagcag gttatttcct acgagaaaag aggacatgat aattggttgg
     1441 cagctcggac tgctgaaaga aacctcagtg atttaaggaa agaaaatgct cacaacaaac
     1501 aaaaattaac tgaaacagag ttgaaatttg aacttttaga aaaagatcct aatgcacttg
     1561 atgtttcaaa tacagcattt ggcagagagc atgccccgaa tggtcccgca ccattgggtc
     1621 agcgttcatc tgaaacgaga gcttttctct ctcctcaaac tttgttggag gatccactgg
     1681 gactctcacc tgtgcttccg gagggaggag gaagaggccc aagaggccca gggaatcccc
     1741 tggaccatca gattaccaat gaaagaggag aaccaagctg tgacaggtta accgatcctc
     1801 acagggctcc ttctgacact gggtccctgt catctccggt ggaacaggac tgtaagatga
     1861 tgtttcctcc accaggacaa tcatatcctg attcagctct tcctcctcaa agggaagaca
     1921 gattttattc taattctgaa agactgtctg gatcagcaga acccagaagt tttaaaatga
     1981 cttctttgga taaaatggat gggtcaatgc cttcagaaat ggaatccagt agaaatgatg
     2041 ccaaagatga tcttggtaat ttaaatgtgc ctgattcatc tctccctgct gaaaatgaag
     2101 caactggccc tggctttatt cctccacctc ttgctccagt cagaggacca ttgtttccag
     2161 tggatacaag gggcccgttc atgagaagag gacctccttt ccccccacct cctccaggaa
     2221 ccatgtttgg agcttctcga ggttattttc caccaaggga tttcccaggt ccaccacatg
     2281 ctccatttgc aatgagaaac atctacccac cgaggggttt acctccttac tttcacccga
     2341 gacctggatt ttaccccaac cccgcattct gaaggtagaa gcgagttccc ttcaggattg
     2401 attccgcctt taatgctact gaacatccag gaccacaaaa gaaacctgac aatattgttg
     2461 ctttcttcaa aagtaatttt gactgatctc attttcagtt taagtaactg ctattactta
     2521 agtgattgca cttttgctca aattgaagtt taatggaatt ataattctca ggatagtatt
     2581 ttgtaaataa agatgtttta aataggaa
//
