LOCUS       NM_001145718            1261 bp    mRNA    linear   PRI 16-FEB-2024
DEFINITION  Homo sapiens cancer/testis antigen family 47 member B1 (CT47B1),
            mRNA.
ACCESSION   NM_001145718 XR_041727
VERSION     NM_001145718.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Chen,Y.T., Iseli,C., Venditti,C.A., Old,L.J., Simpson,A.J. and
            Jongeneel,C.V.
  TITLE     Identification of a new cancer/testis gene family, CT47, among
            expressed multicopy genes on the human X chromosome
  JOURNAL   Genes Chromosomes Cancer 45 (4), 392-400 (2006)
   PUBMED   16382448
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC008162.3.
            
            On Jan 14, 2021 this sequence version replaced NM_001145718.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000371311.5/ ENSP00000360360.3
            RefSeq Select criteria    :: based on manual assertion, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-971               AC008162.3         116356-117326       c
            972-1127            AC008162.3         115325-115480       c
            1128-1261           AC008162.3         114067-114200       c
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xq24"
     gene            1..1261
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /note="cancer/testis antigen family 47 member B1"
                     /db_xref="GeneID:643311"
                     /db_xref="HGNC:HGNC:33293"
                     /db_xref="MIM:300790"
     exon            1..971
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /inference="alignment:Splign:2.1.0"
     CDS             197..1096
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /note="cancer/testis antigen family 147, member B1;
                     cancer/testis CT47 family, member 13; cancer/testis
                     antigen 47B; cancer/testis antigen 47.13"
                     /codon_start=1
                     /product="cancer/testis antigen family 47 member B1"
                     /protein_id="NP_001139190.1"
                     /db_xref="CCDS:CCDS48161.1"
                     /db_xref="GeneID:643311"
                     /db_xref="HGNC:HGNC:33293"
                     /db_xref="MIM:300790"
                     /translation="MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD
                     MVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNE
                     AANFDLAVATRRYPAAGIGFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVP
                     NLWDNPPLLLLSQRLGAGAAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREP
                     AEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAA
                     GEEEKEQEKEKDVENKVKNSKGT"
     exon            972..1127
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /inference="alignment:Splign:2.1.0"
     exon            1128..1261
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1239..1244
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /note="hexamer: AATAAA"
     polyA_site      1261
                     /gene="CT47B1"
                     /gene_synonym="CT47.13; CT47A13"
                     /note="major polyA site"
ORIGIN      
        1 aggattcgct ccctgccctt cccaccttag ggtgtcctct gagacagact cttatttcct
       61 caataaagag aaagactctt attccctcag cggccagctc ctcgcctccc ctcggccgta
      121 gccacctcag tggtcaccgt cttcaccgtg gtcgcctcag cccgctcgcc accccagttg
      181 aggcgctgct ggtgtcatgt ctgccacagg ggaccgacac ccgacccaag gggaccagga
      241 ggccccggta agccaggagg gagcacaggc cgaggcggcc ggagctggta accaggaggg
      301 cggcgactcc ggccccgaca gcagcgacat ggtgcctgcg gccgaggtgg tcggagtcgc
      361 agggcccgtg gaaggcctcg gggaggagga gggtgagcag gcggcaggcc tggccgcagt
      421 cccccagggc gggagcgccg aggaggactc agatatcggg cccgcgacgg aggaagagga
      481 ggaggaggaa gaggggaacg aggcggccaa cttcgacttg gcggtggcca cccgtcggta
      541 cccggcggcg ggcattggct tcgtgttcct gtacctggtc cactcccttc tccgccgcct
      601 ctatcacaac gaccacatcc agatagcgaa ccgtcacctc agccgcctga tggtggggcc
      661 ccacgctgct gtgcccaacc tctgggacaa ccctcccctg ctgctgctgt cccagaggct
      721 gggtgcaggg gctgcagccc cagaaggcga gggcctcggc ctgatccagg aggctgcgtc
      781 ggtccaggag gccgcgtcgg tcccagagcc tgcagtgcca gctgacctgg ccgagatggc
      841 cagggagccc gcggaggagg ccgcagatga gaaaccccca gaggaggccg cagaggagaa
      901 gctcacagag gaggccacag aggaaccggc cgcagaggaa ccgacctcag aggaggccgt
      961 ggcccccgag gaagtcacta aatctcagcc cgaaaagtgg gatgaagagg cccaagatgc
     1021 tgcaggcgag gaagagaaag aacaagaaaa agagaaggat gtggaaaaca aggtgaagaa
     1081 ctccaaaggg acctagacgc agcagaggtg aagccaagaa aatccagatg cctgtgggaa
     1141 ttgtaacaca tatcattcca aagttcgtta catcaaaagt gatatccagt gacatctaac
     1201 tttcatggat gtatgtgaca gtgtttgttc aagttaaaaa taaaagtttg ttttcaatga
     1261 a
//
