LOCUS       NM_173571               1294 bp    mRNA    linear   PRI 03-FEB-2024
DEFINITION  Homo sapiens cancer/testis antigen family 47 member A11 (CT47A11),
            mRNA.
ACCESSION   NM_173571
VERSION     NM_173571.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Chen,Y.T., Iseli,C., Venditti,C.A., Old,L.J., Simpson,A.J. and
            Jongeneel,C.V.
  TITLE     Identification of a new cancer/testis gene family, CT47, among
            expressed multicopy genes on the human X chromosome
  JOURNAL   Genes Chromosomes Cancer 45 (4), 392-400 (2006)
   PUBMED   16382448
  REMARK    GeneRIF: CT47 expression was found in approximately 15% of lung
            cancer and esophageal cancer specimens, but not in colorectal
            cancer or breast cancer. The putative CT47 protein consists of 288
            amino acid, with a C-terminus rich in alanine and glutamic acid.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC029540.1, DB471077.1 and AI024600.1.
            This sequence is a reference standard in the RefSeqGene project.
            
            On Jan 13, 2007 this sequence version replaced NM_173571.1.
            
            Summary: This locus represents a member of the cancer/testis gene
            family 47. This family, also known as CT47, is comprised of 13
            nearly identical loci clustered at Xq24. [provided by RefSeq, Sep
            2010].
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000457020.3/ ENSP00000410400.2
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-736               BC029540.1         5-740
            737-743             DB471077.1         363-369
            744-1284            BC029540.1         748-1288
            1285-1294           AI024600.1         24-33               c
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xq24"
     gene            1..1294
                     /gene="CT47A11"
                     /gene_synonym="CT47.11"
                     /note="cancer/testis antigen family 47 member A11"
                     /db_xref="GeneID:255313"
                     /db_xref="HGNC:HGNC:27397"
                     /db_xref="MIM:300592"
     exon            1..997
                     /gene="CT47A11"
                     /gene_synonym="CT47.11"
                     /inference="alignment:Splign:2.1.0"
     CDS             256..1122
                     /gene="CT47A11"
                     /gene_synonym="CT47.11"
                     /note="cancer/testis CT47 family, member 11"
                     /codon_start=1
                     /product="cancer/testis antigen 47A"
                     /protein_id="NP_775842.2"
                     /db_xref="CCDS:CCDS35381.1"
                     /db_xref="GeneID:255313"
                     /db_xref="HGNC:HGNC:27397"
                     /db_xref="MIM:300592"
                     /translation="MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD
                     VVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEA
                     ANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARN
                     LWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEE
                     KLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEK
                     DAENKVKNSKGT"
     exon            998..1153
                     /gene="CT47A11"
                     /gene_synonym="CT47.11"
                     /inference="alignment:Splign:2.1.0"
     exon            1154..1294
                     /gene="CT47A11"
                     /gene_synonym="CT47.11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accagaatct ttcccaactt gtctaagtcc tctcaggcca gccttggtgg gaggtttcta
       61 ggattcgctc cctgcccttc ccatcttagg gtgtcgtctg agacagactc ttattccctc
      121 aataaagaga gagactctta ttccctcagc ggccagctcc tcgcctcccc tcggccgtag
      181 ccacctcagt ggtcaccgtc ttcaccgtgg tcgcctcagc ccgctcgcca ccccagttga
      241 ggcgctgctg gtgtcatgtc tgccacaggg gaccgacacc cgacccaagg ggaccaggag
      301 gccccggtaa gccaggaggg agcacaggcc gaggcggccg gagctggtaa ccaggagggc
      361 ggcgactccg gccccgacag cagcgacgtg gtgcctgcgg ccgaggtggt cggagtcgca
      421 gggcccgtgg aaggcctcgg ggaggaggag ggtgagcagg cggcaggcct ggccgcagtc
      481 ccccggggcg ggagcgccga ggaggactca gatatcgggc ccgcgacgga ggaagaggag
      541 gaggaagagg ggaacgaggc ggccaacttc gacttggcgg tggtcgcccg tcgctacccg
      601 gcgtcgggca ttcacttcgt gctcctggac atggtccact cccttctcca ccgcctctct
      661 cacaacgacc acatcctcat agagaaccgt caactcagcc gcctgatggt ggggccacac
      721 gctgctgcgc gcaacctctg gggcaacctc cccccgctgc tgctgcccca gaggctgggt
      781 gcaggggccg cagcccgggc gggcgagggc ctgggcctga tccaggaggc cgcatcggtc
      841 ccagagcctg cagtgccagc tgacctggcc gagatggcca gggagcccgc ggaggaggcc
      901 gcagaggaga agctctcaga ggaggccaca gaggaaccag acgcagagga accggccaca
      961 gaagaaccga ccgcacagga ggccacggcc ccagaggaag tcactaaatc tcagcccgaa
     1021 aagtgggatg aagaggccca agatgctgca ggcgaggaag agaaagaaca agaaaaagag
     1081 aaggatgcgg aaaacaaggt gaagaactcc aaagggacct agacgcagca gaggtgaagc
     1141 caagaaaatc cagatgcctg tgggaattgt aacacatatc attccaaagt tcgttacatc
     1201 aaaagtgata tccagtgaca tctaactttc atggatgtat gtgacagtgt tcaagttaaa
     1261 aaataaaagt ttgttttaaa tgaataaact gaaa
//
