LOCUS       XM_047428132            1852 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens cleavage and polyadenylation specific
            factor 6 (CPSF6), transcript variant X2, mRNA.
ACCESSION   XM_047428132
VERSION     XM_047428132.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..1852
                     /gene="CPSF6"
                     /gene_synonym="CFIM; CFIM68; CFIM72; HPBRII-4; HPBRII-7"
                     /note="cleavage and polyadenylation specific factor 6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 ESTs, 314 long SRA reads, 4 Proteins,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 149 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:11052"
                     /db_xref="HGNC:HGNC:13871"
                     /db_xref="MIM:604979"
     CDS             79..1848
                     /gene="CPSF6"
                     /gene_synonym="CFIM; CFIM68; CFIM72; HPBRII-4; HPBRII-7"
                     /codon_start=1
                     /product="cleavage and polyadenylation specificity factor
                     subunit 6 isoform X1"
                     /protein_id="XP_047284088.1"
                     /db_xref="GeneID:11052"
                     /db_xref="HGNC:HGNC:13871"
                     /db_xref="MIM:604979"
                     /translation="MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNG
                     DAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVH
                     SLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCN
                     KQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFP
                     GPAGPGGPPPPFPGNLIKHLVKGTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRP
                     PLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP
                     PPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAP
                     HVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAE
                     FEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVLIS
                     SLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRER
                     ERHRDRDRDRDRERDREREYRHR"
     polyA_site      1852
                     /gene="CPSF6"
                     /gene_synonym="CFIM; CFIM68; CFIM72; HPBRII-4; HPBRII-7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctagatccg ctgctgctgc cgcggcgggc agacctgcag gaggcggcgg cggcggcggc
       61 ggccgaggct gaaggaagat ggcggacggc gtggaccaca tagacattta cgcggatgtc
      121 ggcgaagagt tcaaccagga agctgaatat ggtgggcatg atcagataga tttgtatgac
      181 gatgtcatat ctccatctgc aaataatgga gatgccccag aagaccgaga ttacatggat
      241 actctcccac caactgttgg tgatgatgtg ggtaaaggag cagcaccaaa tgttgtctat
      301 acatatactg gaaagagaat tgcattatat attggaaatc taacatggtg gacaacagat
      361 gaagacttaa ctgaagcagt tcattctttg ggagtaaatg atattttgga gataaaattt
      421 tttgaaaatc gggcaaatgg ccagtcaaag gggtttgccc ttgttggtgt tggatctgaa
      481 gcatcttcaa aaaagttaat ggatctgtta cctaaaagag aacttcatgg tcagaatcct
      541 gttgtaactc catgcaataa acagttcctg agtcaatttg aaatgcagtc caggaaaact
      601 acacaatcag gacaaatgtc tggggaaggt aaagctggtc ctccaggagg cagttcccgt
      661 gcagcatttc cacaaggtgg tagaggacgg ggccgttttc caggggctgt tcctggtggg
      721 gacagatttc ctgggccagc aggaccagga gggccacccc caccttttcc aggaaatttg
      781 atcaagcatc ttgttaaagg aactcggcct ttgttcctgg aaactaggat tccatggcat
      841 atggggcaca gcatagagga aatacccatt tttggcctaa aagctggaca gactccacca
      901 cgtccaccct taggtcctcc aggcccacct ggtccaccag gtcctccacc tcctggtcag
      961 gttctgcctc ctcctctagc tgggcctcct aatcgaggag atcgccctcc accaccagtt
     1021 ctttttcctg gacaaccttt tgggcagcct ccattgggtc cacttcctcc tggccctcca
     1081 cctccagttc caggctacgg cccccctcct ggcccaccac ctccacaaca gggaccacct
     1141 ccacctccag gcccctttcc acctcgtcca cccggtccac ttgggccacc ccttacacta
     1201 gctcctcctc cgcatcttcc tggaccacct ccaggtgccc caccgccagc tccgcatgtg
     1261 aacccagctt tctttcctcc accaactaac agtggcatgc ctacatcaga tagccgaggt
     1321 ccaccaccaa cagatccata tgggcgacct ccaccatatg ataggggtga ctatggcccc
     1381 cctggaaggg aaatggatac tgcaagaacg ccattgagtg aagctgaatt tgaagaaatc
     1441 atgaatagaa atagggcaat ctcaagcagt gctatttcga gagctgtgtc tgatgccagt
     1501 gctggtgatt atgggagtgc tattgagaca ctggtaactg caatttcttt aattaaacaa
     1561 tccaaagtat ctgctgatga tcgttgcaaa gttcttatta gttctttgca agattgcctt
     1621 catggaattg agtccaagtc ttatggttct ggatcaagaa gacgtgaacg atcaagagag
     1681 agggaccata gtagatcacg agaaaagagt cgacgtcata aatcccgtag tagagaccgt
     1741 catgacgatt attacagaga gagaagcaga gaacgagaga ggcaccggga tcgtgaccga
     1801 gaccgtgacc gagagcgtga ccgagagcgc gaatatcgtc atcgttagaa gg
//
