LOCUS       XM_047422393            4977 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens copine 3 (CPNE3), transcript variant X4,
            mRNA.
ACCESSION   XM_047422393
VERSION     XM_047422393.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000008.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4977
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
     gene            1..4977
                     /gene="CPNE3"
                     /gene_synonym="CPN3; PRO1071"
                     /note="copine 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 mRNAs, 66 ESTs, 3150
                     long SRA reads, 8 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     35 samples with support for all annotated introns"
                     /db_xref="GeneID:8895"
                     /db_xref="HGNC:HGNC:2316"
                     /db_xref="MIM:604207"
     CDS             276..1889
                     /gene="CPNE3"
                     /gene_synonym="CPN3; PRO1071"
                     /codon_start=1
                     /product="copine-3 isoform X1"
                     /protein_id="XP_047278349.1"
                     /db_xref="GeneID:8895"
                     /db_xref="HGNC:HGNC:2316"
                     /db_xref="MIM:604207"
                     /translation="MAAQCVTKVALNVSCANLLDKDIGSKSDPLCVLFLNTSGQQWYE
                     VERTERIKNCLNPQFSKTFIIDYYFEVVQKLKFGVYDIDNKTIELSDDDFLGECECTL
                     GQIVSSKKLTRPLVMKTGRPAGKGSITISAEEIKDNRVVLFEMEARKLDNKDLFGKSD
                     PYLEFHKQTSDGNWLMVHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYD
                     NDGSHDLIGTFQTTMTKLKEASRSSPVEFECINEKKRQKKKSYKNSGVISVKQCEITV
                     ECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYISPNGVNEYLTALWSVGLVIQ
                     DYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLY
                     GPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQAIVNASRLPMS
                     IIIVGVGGADFSAMEFLDGDGGSLRSPLGEVAIRDIVQFVPFRQFQNAPKEALAQCVL
                     AEIPQQVVGYFNTYKLLPPKNPATKQQKQ"
ORIGIN      
        1 gccagtccag ccctaggttc tcctgaatcc ctgcggtccc agcgtcgctc cggacgctgc
       61 caacctgttc tccaccgtcg ctcgacttcc acctctaaga ctcccacgtg agtgcgggcg
      121 tctcccagtt cctgggccgg tgaggcagca gcccagcaac cgtaccgccc gggggaaaag
      181 gaaagtcctg gcctggagga tccgagcccg caggctccgt gcggcaggaa actcaggttg
      241 aataattcat caaattacac aactgaactc aagacatggc tgcccagtgt gtcacaaagg
      301 tggcgctgaa tgtttcctgt gccaatcttt tggataaaga tatagggtca aagtcagacc
      361 ctttatgtgt gttgtttttg aatacaagtg gtcaacagtg gtatgaggtt gagcgcacag
      421 aaaggattaa gaattgcttg aatccccaat tttccaagac atttattatt gattactact
      481 ttgaagtggt tcagaaattg aaatttgggg tttatgacat cgacaacaaa actattgagc
      541 tgagtgatga tgacttctta ggggaatgtg aatgtaccct tggacaaatt gtttccagca
      601 agaagctaac tcgaccactg gtgatgaaaa ctggcagacc tgcaggaaaa gggagcatta
      661 cgatttcagc tgaagaaata aaagataata gagtggtctt gtttgaaatg gaagccagaa
      721 aactggataa taaggatcta tttggaaagt cagacccata cctggaattc cacaagcaga
      781 catctgatgg aaactggcta atggttcatc ggacagaggt tgttaaaaac aacttgaatc
      841 ctgtttggag gcctttcaag atctctctta actcactgtg ttacggagat atggacaaaa
      901 ccattaaggt ggagtgttat gattatgaca atgatgggtc acatgatctc attggaacat
      961 ttcagaccac catgacaaaa ctgaaagaag cctccagaag ctcacctgtt gaatttgaat
     1021 gcataaatga gaaaaaaagg caaaagaaaa aaagctacaa gaattcaggt gttatcagtg
     1081 tgaaacagtg tgagattaca gtagaatgca cattccttga ctatataatg ggaggatgtc
     1141 agctgaattt tactgtggga gtggacttca ctggctccaa tggtgaccca aggtctccag
     1201 actcccttca ttacatcagc cccaatggcg ttaatgagta tttgactgct ctctggtctg
     1261 tgggactggt cattcaagat tatgatgctg ataagatgtt tccagctttt ggttttggcg
     1321 ctcagatacc tcctcagtgg caggtatcac atgaatttcc aatgaacttc aacccatcca
     1381 atccctactg caatggaatc caaggcattg tagaggcgta tcggtcttgt cttcctcaga
     1441 taaaactcta tggaccaact aatttttctc caatcataaa tcacgtggcc aggtttgctg
     1501 ctgcagccac gcaacagcag acagcttctc aatattttgt gcttttgatt attactgatg
     1561 gtgtgatcac agaccttgat gaaaccagac aagctatagt taatgcctcc aggctgccta
     1621 tgtccatcat aattgttgga gttggaggtg ctgacttcag cgccatggag tttctggatg
     1681 gtgatggtgg aagtctccgc tccccattgg gcgaagtggc catcagagat attgtccagt
     1741 ttgtgccttt cagacagttc cagaatgctc caaaagaagc acttgctcag tgtgtcttgg
     1801 cagagattcc ccagcaggtg gtgggctact tcaatacata caaactcctt cctcccaaga
     1861 acccagccac gaaacaacag aagcagtgac cacttcaaca gaattctttt gtgttatgtg
     1921 gagcaatgcc atctctcacc ccaaatcgtg tatctgtcat tctacgtact ttttaccccc
     1981 agcatttatg atgtaaatct ctttctctat ggattatatc tgtttaaagc attctttcta
     2041 ggttattttg gggggacagt gccaagtcca tctttgccca gtcaattcag tgattgatag
     2101 caatttacat taattgcagt aaagctcttt ggattagaaa ttagtgtggg gaaagcttat
     2161 tctgttgttg tttttgttta ctttcatatg atgaaaatgc tgtgtttaag tgtttgtcaa
     2221 taggaagaat ggaaaactgt tgggatgatg tggtttgcag gttgctgtgc ctgattcaca
     2281 gtgtatgttg tataagccaa tgtccatacc tgattatgag agcttcttaa attatatgat
     2341 atcaaatttg ttcctgtaac tctgtataca gtgcttttct gcaaggtaaa aataacctgt
     2401 ctatgcatct gatttttgct acagtttaga cactgtggtt tacaaaacag catgcactca
     2461 acttgggact ttatgaaaag tactgaatga gcaggaaaag gcacatactc agttttttaa
     2521 atgtacaatc aacaagtaaa aataacctca tgtaagtaag ccatttttat ttgcctttct
     2581 agatatttta ttttattgtg gaaaactgta aacatggtca gatttggctt tttttttcat
     2641 taactgagca agactttcag gatattgtag atgcacagat ggtaggttgt cctgaattct
     2701 acattattag attactttaa ttgagatttg ttaaaacggt taggactgtt ttgtccagga
     2761 aagataagag gaccaaacat ataaggtgaa attcagaatt ccgtttcctt ctaactaatg
     2821 aaaaactgct tactaaaaaa aaattttata ctttccttgc taaggtccca tatattgatt
     2881 tgtacagatc cacttagtca ttttctcctt tttttaagaa ccattttcat ctgattttta
     2941 aactcacgat accagttatc tgttaatcaa aattgcattt tacaatttaa taatgtgata
     3001 tttcctatgt ctacagcata ccttattagg tataaaacct actgcaactt agaaaaagga
     3061 aagaaaaaag aaaacttttc caactgctgc attaagatag ggtggatttt atgtgctttt
     3121 tttttttaag agttgaattt cttttcctga cttttacctt ttacagcgta ttacttagtg
     3181 aacattacat tttcagaata gatcctaata ttttattgag ggcctatgtg ctaaaaacta
     3241 tgcatatcta tatattggcc aattatcttt aataatttac cttttgaaat tgcatgttta
     3301 tcatatatcc ttaagtggac acatacagtg ccatgttgat gtgcctctca gttttattga
     3361 aaagctgccc cacagcccat gtctcttgtt ctctgcaatg cctcaaggga gtgagctctc
     3421 aaccacagat agctgtggct tctcagaagc agctcattgc caaggccagg ctgagagggg
     3481 acctgcttgc tgtggtggtt gcctagccca gatgagcatt tacctaccac cttcccactt
     3541 ggctagctgt cctttggata tgtgctgtta actggggaag gcatctaact agtagcctgc
     3601 tactccatag tatggctcaa tagatgacac atcattttga cattatcaat aggagaaaag
     3661 aaaactaacc cttcttctga ttgtttggag ccatagttgt ctcagatgtt ctaattctct
     3721 ttgtatgctt ggaaacagca tagatatgtt gctgtggttt tcagaatttt ctcttttaat
     3781 cacaagaagc cttttaaaaa atgacttaca catattctca atgtacagta aaacagacag
     3841 aagtgagctt atctgtttga tgctgtggca gggtcccagt cactgggcat atcctccttc
     3901 tccttaacca gctccacagc agcccctgag tcacctgcac aaggtgcttg ggaactgctg
     3961 gttatgagca ttcctggttt tcttcagcca aataacaggt aatcactgtc aattggattt
     4021 ggtcttcatt attttatatt ctgattttat cagaattatt ctattttaaa attgttttaa
     4081 aatttaaaac atttaattca tgatcatgtt catcagtaga tgctattatt cataagaact
     4141 gtgattccag caaactaggg taattggtgc ctttttacag ttttgaataa aagcatttac
     4201 aatttctaaa ttatcagttt tcacagtttc agcactcaac ctcatcatac gctgatttaa
     4261 tattgtttta cattaaaata gtccttttcc ctgttgtgcc accattcatt taagtgctgt
     4321 ttgttcttaa aatgcattta aagaaaaatt acccatattg actttcacac ctcatataat
     4381 cagatctatt acaaatatat atcggagtga cggtgcccag gatagatgta atatttctta
     4441 cagatgctgg cacagaggaa ataatatacc agctaatcta gtcacctaac cttgtggtta
     4501 gaattgcaat tttaagacca gaaaaatttg aagtctgatc agagatttac aactgttcat
     4561 tatagtggtg ccttaggcaa tctttccaaa gtaaattcag ggccccattg ctacttatgc
     4621 catatttgga catacttttt ttttcttcaa ttttgtaaac ttcctggaaa gctgtcttca
     4681 ctaagtatcc cctagtctct atatatgtgg ttagtagtca tggaaatgac acataaagta
     4741 cgccagaagt ttgatggaac gtgttagaaa ctgttttgtg cttttatgga tgtcatactt
     4801 gacaatacat gtgtaagtta ctaatatatg aattgatgct aaatatatct tacatttgaa
     4861 ttccttttgg ataaagttat ttcttgatgt gacagagtag tgtgttttca tttttattct
     4921 ttacatgtga ccaaaacaat agaaaagtta aaaataaaat atagtgtttt aggtggc
//
