LOCUS       NM_001395862            1240 bp    mRNA    linear   PRI 08-FEB-2025
DEFINITION  Homo sapiens cytoplasmic polyadenylated homeobox like 2 (CPHXL2),
            mRNA.
ACCESSION   NM_001395862
VERSION     NM_001395862.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Madissoon,E., Jouhilahti,E.M., Vesterlund,L., Tohonen,V.,
            Krjutskov,K., Petropoulos,S., Einarsdottir,E., Linnarsson,S.,
            Lanner,F., Mansson,R., Hovatta,O., Burglin,T.R., Katayama,S. and
            Kere,J.
  TITLE     Characterization and target genes of nine human PRD-like homeobox
            domain genes expressed exclusively in early embryos
  JOURNAL   Sci Rep 6, 28995 (2016)
   PUBMED   27412763
  REMARK    Erratum:[Sci Rep. 2016 Sep 02;6:32053. doi: 10.1038/srep32053..
            PMID: 27586261]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Tohonen,V., Katayama,S., Vesterlund,L., Jouhilahti,E.M.,
            Sheikhi,M., Madissoon,E., Filippini-Cattaneo,G., Jaconi,M.,
            Johnsson,A., Burglin,T.R., Linnarsson,S., Hovatta,O. and Kere,J.
  TITLE     Novel PRD-like homeodomain transcription factors and
            retrotransposon elements in early human development
  JOURNAL   Nat Commun 6, 8207 (2015)
   PUBMED   26360614
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC025287.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: LN651086.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000640173.1/ ENSP00000491197.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                AC025287.8         40861-40883
            24-217              AC025287.8         48314-48507
            218-1240            AC025287.8         56621-57643
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16q23.1"
     gene            1..1240
                     /gene="CPHXL2"
                     /note="cytoplasmic polyadenylated homeobox like 2"
                     /db_xref="GeneID:112268164"
                     /db_xref="HGNC:HGNC:55919"
     exon            1..23
                     /gene="CPHXL2"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..1213
                     /gene="CPHXL2"
                     /codon_start=1
                     /product="cytoplasmic polyadenylated homeobox-like protein
                     2"
                     /protein_id="NP_001382791.1"
                     /db_xref="CCDS:CCDS92197.1"
                     /db_xref="GeneID:112268164"
                     /db_xref="HGNC:HGNC:55919"
                     /translation="MSSQAFPAEEDHHNEERQTKKKRKTKHRHKFSEELLQELKEIFG
                     ENGYPDFTTRKTLANKFDCPVNVINNWFQNNRARLPPEERQRIFLTWKKHDFPVQACP
                     FLSLQETQAAASNYATEQSFSCAKRALMRRPGCSLLEKQRIACQQMGYNCFSLENQET
                     PSQQVGSMCSSLEKQGIPSQQVGSQCSYLVAGTEKHPGYALEYGGDTGSEHSTAYRFL
                     SYNSAECLHPPPSSVPYFHGERTETRESQHASPFLLDYAQGAYGVKKDHCLCSFCLSL
                     LQEQQQNDWQYHPQQHQQPQNYSEGMMLQEQLPMDSGPWDLEKQWPSAQSQLQSQLPQ
                     NNGKPLCSQLQHVPPQIAANSPLLPLGQDMQVGASSNSGLKCSSFRLRGLHGPATGTQ
                     GCSFAKYC"
     exon            24..217
                     /gene="CPHXL2"
                     /inference="alignment:Splign:2.1.0"
     exon            218..1240
                     /gene="CPHXL2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtttcgac atgtcttccc aagctttccc agctgaagag gatcatcata atgaagaaag
       61 acaaacaaag aaaaaaagaa aaacaaaaca ccgacataaa ttttctgaag aattattgca
      121 ggaacttaag gaaatatttg gagagaacgg ttatcctgat ttcaccacta ggaaaacact
      181 ggccaacaaa tttgattgtc cggttaacgt gataaacaac tggttccaga acaatagagc
      241 cagacttcca ccggaagaaa gacaaagaat atttcttact tggaaaaaac acgatttccc
      301 agtccaagcc tgtccatttt taagcctcca ggaaacccag gctgcagctt ccaactatgc
      361 cacagagcag agtttttcct gtgccaagag ggctctgatg agaagacctg gttgctccct
      421 tctggagaaa cagaggattg cctgtcaaca gatgggctac aattgcttct ctttggagaa
      481 ccaagagact cccagtcaac aggtgggctc catgtgctct tctctggaga aacaagggat
      541 tcccagtcaa caggtgggtt cccagtgctc ctatctggtc gcaggtactg aaaagcatcc
      601 aggctatgct ttggagtatg gaggtgacac aggaagtgag cattctactg cctatcgttt
      661 tctcagctac aactctgcag aatgccttca tcctccccca tcttctgtgc catattttca
      721 tggagaaagg actgaaacca gggaaagcca gcatgcaagt cccttccttt tggattacgc
      781 tcaaggtgct tacggggtga agaaagacca ttgtctttgc tcattctgtc tctcactgct
      841 gcaagaacag cagcagaatg attggcagta tcacccacag cagcaccaac agcctcagaa
      901 ttactcagag gggatgatgt tgcaggaaca gctgccaatg gactcgggtc cttgggatct
      961 agagaagcag tggccctcgg ctcagtcaca gctgcagagt caactgcctc agaataatgg
     1021 aaagccgttg tgctctcaac tgcagcacgt gcctccccaa atagctgcca actcacccct
     1081 gctgcctctg gggcaagata tgcaggtagg ggcttcaagc aactcaggac tcaaatgcag
     1141 cagttttagg ttgaggggtc tacacgggcc tgccacagga acccaaggat gcagctttgc
     1201 aaagtattgc taagtatcac agaaccatag ccacaggtca
//
