LOCUS       XM_017015380            2275 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens contactin associated protein family member
            3C (CNTNAP3C), transcript variant X1, mRNA.
ACCESSION   XM_017015380
VERSION     XM_017015380.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017015380.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..2275
                     /gene="CNTNAP3C"
                     /note="contactin associated protein family member 3C;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 ESTs, 108 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 78 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100289279"
                     /db_xref="HGNC:HGNC:53878"
     CDS             528..2072
                     /gene="CNTNAP3C"
                     /codon_start=1
                     /product="contactin-associated protein-like 3 isoform X1"
                     /protein_id="XP_016870869.1"
                     /db_xref="GeneID:100289279"
                     /db_xref="HGNC:HGNC:53878"
                     /translation="MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSF
                     SSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGS
                     SDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPL
                     AWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSN
                     GILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVL
                     IELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLE
                     NLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKV
                     SVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLND
                     GQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVLIDSGDTYYFGGKRRQLNDTGSGTTFY
                     LYCFAF"
     polyA_site      2275
                     /gene="CNTNAP3C"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtgaacagcg cagtgataaa gcctggcgtt ctccacctgc aggcggaggc tgacggcgcg
       61 gtctttggcg cgagtccgtg caccgcggcc gccccgcccc ggtgggagag agggacggag
      121 gaagctgcag gtataacggg aggagagcgc caggcggagc tggggcgtcc ctcccgctcg
      181 cttcttgact cgcgttgctg ccggccgcct cccgcgccta gtgtccggga cgcgcctgaa
      241 cctgccgcct ccgtgcctgg ggtggcgccg cgcggccccg agcgctccag aaagctgcgg
      301 cgcgagtccg cggggccgac ctcggagacg cagctggggc cgggcgcggc ttggcgggag
      361 ggtctgcagc gccgagggag gctgctagtg cgtgaggaag agagctagag actggacacg
      421 ggagacagag cagcgtcaga gccgcgcagg ggacgggagt gagagcagga gcgacgcaga
      481 gcggccgtcg ccgtgcccgg gtctcagggc gcctggctga agtgagcatg gcttcagtgg
      541 cctgggccgt cctcaaggtg ctgctgcttc tccccactca gacttggagc cccgtgggag
      601 caggaaatcc acctgactgt gatgccccac tggcctctgc cttgcctagg tcatccttca
      661 gcagctcctc agagctgtcc agcagccacg gcccggggtt ttcaaggctt aatcgaagag
      721 atggagctgg tggctggact ccacttgtgt caaataaata ccaatggctg caaattgacc
      781 ttggagagag aatggaggtc actgctgtcg ccacccaagg aggatatggg agctctgact
      841 gggtgaccag ctacctcctg atgttcagtg atggtgggag aaactggaag cagtatcgcc
      901 gagaagaaag catctggggt tttccaggaa acacaaacgc agacagtgtg gtgcactaca
      961 gactccagcc tccctttgaa gccaggttcc tgcgctttct ccctttagcc tggaacccta
     1021 ggggcaggat tgggatgcgg atcgaagtgt acggatgtgc atataaatct gaggtggttt
     1081 attttgatgg acaaagtgct ctgctgtata gacttgataa aaaaccttta aaaccaataa
     1141 gagacgttat ttctttgaaa tttaaagcca tgcagagcaa tggaattcta cttcacagag
     1201 aaggacaaca tggaaatcac attactctgg aattaattaa aggaaagctt gtcttttttc
     1261 ttaattcagg caatgctaag ctgccttcca ctattgctcc tgtgaccctc accctgggca
     1321 gcctgctgga cgaccagcac tggcattccg tcctcatcga gctcctcgac acgcaggtca
     1381 acttcaccgt ggacaaacac actcatcatt tccaagcaaa gggagattcc agttacttgg
     1441 atcttaattt tgagatcagc tttgggggaa ttccgacacc cggaagatcg cgggcattca
     1501 gacgtaaaag ctttcatggg tgtttagaaa atctttatta taatggagtg gatgttaccg
     1561 aattagccaa gaaacacaaa ccacagatcc tcatgatggg aaatgtgtcc ttctcatgtc
     1621 cacagccaca gactgtccct gtgacttttc tgagctccag gagttatctg gctctgccag
     1681 gcaactctgg ggaggacaaa gtgtctgtca cttttcaatt tcgaacgtgg aacagagcag
     1741 gacatttgct tttcggcgaa cttcgacgtg gttcagggag tttcgtcctc tttcttaagg
     1801 atggcaagct caaactgagt ctcttccagc cgggacagtc accaaggaat gtcacagcag
     1861 gtgctggatt aaacgatggg cagtggcact ctgtgtcctt ctctgccaag tggagccata
     1921 tgaatgtggt ggtggacgat gacacagctg ttcagcccct ggtggctgtg ctcattgatt
     1981 caggtgacac ctattatttt ggaggtaaga gaaggcaact gaatgacact ggcagtggaa
     2041 ccacttttta tctttattgc tttgcatttt gagtctctag tcaaatttaa accaagttga
     2101 tactaagaaa taatttatct ctagccatga aattaatacc ttttgagttt ataaaaaaca
     2161 tgaaacattt aatcagtttt tcttcccaat acaaaaataa gtatctgcag aaagtttact
     2221 tgctgtttaa ataacttcat attttcattt aacattaaaa gaaaaatata tttga
//
