LOCUS       NM_015680               2019 bp    mRNA    linear   PRI 06-JUN-2024
DEFINITION  Homo sapiens cyclin Pas1/PHO80 domain containing 1 (CNPPD1),
            transcript variant 1, mRNA.
ACCESSION   NM_015680
VERSION     NM_015680.6
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Lamesch,P., Li,N., Milstein,S., Fan,C., Hao,T., Szabo,G., Hu,Z.,
            Venkatesan,K., Bethel,G., Martin,P., Rogers,J., Lawlor,S.,
            McLaren,S., Dricot,A., Borick,H., Cusick,M.E., Vandenhaute,J.,
            Dunham,I., Hill,D.E. and Vidal,M.
  TITLE     hORFeome v3.1: a resource of human open reading frames representing
            over 10,000 human genes
  JOURNAL   Genomics 89 (3), 307-315 (2007)
   PUBMED   17207965
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC068946.4.
            
            On Nov 23, 2018 this sequence version replaced NM_015680.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC012821.2, AY007160.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000360507.10/ ENSP00000353698.5
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-166               AC068946.4         71118-71283         c
            167-275             AC068946.4         70581-70689         c
            276-357             AC068946.4         69949-70030         c
            358-478             AC068946.4         69346-69466         c
            479-607             AC068946.4         69136-69264         c
            608-669             AC068946.4         68504-68565         c
            670-787             AC068946.4         67708-67825         c
            788-2019            AC068946.4         66255-67486         c
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2q35"
     gene            1..2019
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /note="cyclin Pas1/PHO80 domain containing 1"
                     /db_xref="GeneID:27013"
                     /db_xref="HGNC:HGNC:25220"
     exon            1..166
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..1330
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /note="cyclin Pas1/PHO80 domain-containing protein 1"
                     /codon_start=1
                     /product="protein CNPPD1"
                     /protein_id="NP_056495.4"
                     /db_xref="CCDS:CCDS2433.1"
                     /db_xref="GeneID:27013"
                     /db_xref="HGNC:HGNC:25220"
                     /translation="MDLTGLLLDEEGTFSLAGFQDFTFLPGHQKLSARIRRRLYYGWD
                     WEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVY
                     IERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLN
                     ALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDLCVLLEQPTWQ
                     LALGSLCQRLVKLSCLLAVAYVSSVALAVASVAVIHQSLGLSCIPTPGPPDLGLTSRC
                     LLEPCIPSVPQCLPSLANVSSCLEGSMGLRSLWGSLLASLTPPPLPPPDPPAPPTLLH
                     NCHLCQKLQRDSPTCHACLHPNRTVPTALSSPWYHTYGLAPPWPWSPVLLSLPQPQQC
                     SLFSVMELARLKSFVFPG"
     exon            167..275
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     exon            276..357
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     exon            358..478
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     exon            479..607
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     exon            608..669
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     exon            670..787
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     exon            788..2019
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2000..2005
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /note="hexamer: AATAAA"
     polyA_site      2019
                     /gene="CNPPD1"
                     /gene_synonym="C2orf24; CGI-57"
                     /note="major polyA site"
ORIGIN      
        1 aggctggcag gtggacaggc gggcaaggac agctccgcga gccccctaca actcgtttcc
       61 ttccgttcac cttcgcaggg cggcgactgg cggcgcgatg gacctgaccg ggctcctgct
      121 ggacgaagaa ggcaccttct ccctcgccgg cttccaggac ttcacgttcc tcccaggaca
      181 ccagaagctg agtgcccgga tccgaaggag gctctactat ggctgggact gggaagccga
      241 ctgtagcctg gaggagctct ccagcccggt ggcagacatt gctgtcgaac tgctccagaa
      301 ggcagccccc agccctattc gccgactcca gaagaaatat gtagctcatg tgtcccggga
      361 ggcatgcatc tccccatgtg ctatgatgct ggctctggtg tacattgaac ggctccggca
      421 ccgaaaccca gactacttgc agcatgtgtc atcctctgac ttgttcctga tctccatgat
      481 ggtggccagt aagtacctct atgatgaagg ggaggaggag gaggtcttca acgacgaatg
      541 gggagctgct gggggtgtgg ccgtgcccac tctcaatgcc ttggagaggg gcttcctgag
      601 tgccatggat tggcatctct acactgaccc tcgggagatc tttgaggtgc tgagctggtt
      661 ggagagctgt gtggctgagc agcagggacg gtggcgaggc tggtacacct acacagacct
      721 gtgtgtgctg ctggagcagc cgacctggca gttggccctg ggctccctct gccagcggct
      781 ggtaaagctg tcttgcctgt tagctgtggc atatgtgagc agtgtggccc tggctgtggc
      841 atcggtggcc gtaatacatc agtctttggg gctgtcctgc atccctacac ctgggccgcc
      901 tgaccttgga ctgacctccc gttgcctcct ggagccctgc ataccttctg tgccacaatg
      961 cctgccgtct ctcgctaatg tctccagctg cctggaaggc agcatggggc tgcggtcact
     1021 ctggggcagt cttctggcct cactgactcc tccaccattg cctcccccag acccccctgc
     1081 ccctcccact cttcttcata actgccacct ttgccagaag ctccagagag actccccaac
     1141 ctgccatgcc tgcctccacc ccaaccgtac agtccccact gcgctgtcca gcccctggta
     1201 ccatacctat ggcctggctc ccccctggcc ttggagcccg gtgctccttt cacttcctca
     1261 gcctcagcaa tgttcccttt tcagtgtcat ggagctggct cgcctcaagt ctttcgtttt
     1321 cccaggctag gtagggctgt gaggaatgca ttaagagggt ttgggagttt ctgagaacct
     1381 ggaggagcaa agcttgattc agatcctgtc tgcctcgctg ggtccttggc aggtcccctg
     1441 tcctcctggg tgggagctta tggggtggtg gggcagaagg actgaaggta attcactcct
     1501 agatcgcagt ggctggctgc ttggccagga cagtgatgcc gccagggaga gcttccgctt
     1561 ggtgaccagg gacatgtccc agatggacat agaagcccct ctctgcctcc ctgggatttt
     1621 ttagactttt acttttgatt tccctaggat ggaagagtat aggtgggaga taagggaagt
     1681 ggggtgagag gagaaaggaa atgttggcat gggcctgtgt gatgtccctg aggcagaaga
     1741 gccggggact gatgggttca ggtgggagct gctgggtgag gcagggaacc cttttcactc
     1801 ccattcctta gctttagtct aatggagcca aggactgctg ggaccttcaa ccctgatctt
     1861 ttgtcttcca gtcttctctt agtgtcctgc tcctaggttt ccctctcttc tggttcttct
     1921 cccaggtatt ctcttcccag gcctctctgg ccactgcttt gtatcagggt ttttcacgct
     1981 tttgtagaac tgaggtttca ataaacagtt tcagttgca
//
