LOCUS       NM_001010886             598 bp    mRNA    linear   PRI 05-APR-2024
DEFINITION  Homo sapiens colipase like 1 (CLPSL1), transcript variant 1, mRNA.
ACCESSION   NM_001010886 XM_291169
VERSION     NM_001010886.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Li,J.Y., Wang,H.Y., Liu,J., Liu,Q., Zhang,J.S., Wan,F.C., Liu,F.J.,
            Jin,S.H. and Zhang,Y.L.
  TITLE     Transcriptome analysis of a cDNA library from adult human
            epididymis
  JOURNAL   DNA Res 15 (3), 115-122 (2008)
   PUBMED   18390568
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DV643925.1, BX106742.1 and DQ823638.1.
            
            On Nov 23, 2018 this sequence version replaced NM_001010886.4.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO408426.1, DV643925.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2145743 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000373861.6/ ENSP00000362968.5
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-25                DV643925.1         554-578             c
            26-524              BX106742.1         1-499
            525-598             DQ823638.1         502-575
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6p21.31"
     gene            1..598
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /note="colipase like 1"
                     /db_xref="GeneID:340204"
                     /db_xref="HGNC:HGNC:21251"
     exon            1..191
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..458
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; colipase-like protein C6orf127; colipase-like
                     protein 1"
                     /codon_start=1
                     /product="colipase-like protein 1 isoform 1 precursor"
                     /protein_id="NP_001010886.1"
                     /db_xref="CCDS:CCDS43456.1"
                     /db_xref="GeneID:340204"
                     /db_xref="HGNC:HGNC:21251"
                     /translation="MMLPQWLLLLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQD
                     CETGCCQRAPDNCESHCAEKGSEGSLCQTQVFFGQYRACPCLRNLTCIYSKNEKWLSI
                     AYGRCQKIGRQKLAKKMFF"
     exon            192..314
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /inference="alignment:Splign:2.1.0"
     exon            315..598
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /inference="alignment:Splign:2.1.0"
     regulatory      579..584
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /note="hexamer: AATAAA"
     polyA_site      598
                     /gene="CLPSL1"
                     /gene_synonym="C6orf127; dJ510O8.6; ESP32"
                     /note="major polyA site"
ORIGIN      
        1 acatggtgtt cccacagctg ggaggacacc cacatggtcg gcgtgcagga tatttcgctg
       61 gaccctagaa aagccaccac gacctgtggg ccatgatgct accccaatgg ctgctgctgc
      121 tgttccttct cttcttcttt ctcttcctcc tcaccagggg ctcactttct ccaacaaaat
      181 acaacctttt ggagctcaag gagtcttgca tccggaacca ggactgcgag actggctgct
      241 gccaacgtgc tccagacaat tgcgagtcgc actgcgcgga gaaggggtcc gagggcagtc
      301 tgtgtcaaac gcaggtgttc tttggccaat atagagcgtg tccctgcctg cggaacctga
      361 cttgtatata ttcaaagaat gagaaatggc ttagcatcgc ctatggccgt tgtcagaaaa
      421 ttggaaggca gaagttggct aagaaaatgt tcttctagtg ctccctcctt cttgctgcct
      481 cctcctcctc cacctgctct cctccctacc cagagctctg tgttcaccct gttccccaga
      541 gcctccacca tgagtggagg gaagtgggga gtgattgaaa taaagagctt tttcaatg
//
