LOCUS       NM_182577               1589 bp    mRNA    linear   PRI 02-APR-2024
DEFINITION  Homo sapiens CIMAP1 family member D (CIMAP1D), transcript variant
            1, mRNA.
ACCESSION   NM_182577
VERSION     NM_182577.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Leung,M.R., Zeng,J., Wang,X., Roelofs,M.C., Huang,W., Zenezini
            Chiozzi,R., Hevler,J.F., Heck,A.J.R., Dutcher,S.K., Brown,A.,
            Zhang,R. and Zeev-Ben-Mordehai,T.
  TITLE     Structural specializations of the sperm tail
  JOURNAL   Cell 186 (13), 2880-2896 (2023)
   PUBMED   37327785
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Haenig,C., Atias,N., Taylor,A.K., Mazza,A., Schaefer,M.H., Russ,J.,
            Riechers,S.P., Jain,S., Coughlin,M., Fontaine,J.F., Freibaum,B.D.,
            Brusendorf,L., Zenkner,M., Porras,P., Stroedicke,M., Schnoegl,S.,
            Arnsburg,K., Boeddrich,A., Pigazzini,L., Heutink,P., Taylor,J.P.,
            Kirstein,J., Andrade-Navarro,M.A., Sharan,R. and Wanker,E.E.
  TITLE     Interactome Mapping Provides a Network of Neurodegenerative Disease
            Proteins and Uncovers Widespread Protein Aggregation in Affected
            Brains
  JOURNAL   Cell Rep 32 (7), 108050 (2020)
   PUBMED   32814053
REFERENCE   3  (bases 1 to 1589)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   4  (bases 1 to 1589)
  AUTHORS   Fong,K.W., Leung,J.W., Li,Y., Wang,W., Feng,L., Ma,W., Liu,D.,
            Songyang,Z. and Chen,J.
  TITLE     MTR120/KIAA1383, a novel microtubule-associated protein, promotes
            microtubule stability and ensures cytokinesis
  JOURNAL   J Cell Sci 126 (Pt 3), 825-837 (2013)
   PUBMED   23264731
REFERENCE   5  (bases 1 to 1589)
  AUTHORS   Salyakina,D., Ma,D.Q., Jaworski,J.M., Konidari,I., Whitehead,P.L.,
            Henson,R., Martinez,D., Robinson,J.L., Sacharow,S., Wright,H.H.,
            Abramson,R.K., Gilbert,J.R., Cuccaro,M.L. and Pericak-Vance,M.A.
  TITLE     Variants in several genomic regions associated with asperger
            disorder
  JOURNAL   Autism Res 3 (6), 303-310 (2010)
   PUBMED   21182207
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC005775.1 and AC006124.2.
            
            On Jul 21, 2020 this sequence version replaced NM_182577.2.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK097378.1, BC104469.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1966682,
                                           SAMEA1968968 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000315489.5/ ENSP00000318029.2
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-363               AC005775.1         10500-10862         c
            364-471             AC005775.1         8273-8380           c
            472-585             AC005775.1         3528-3641           c
            586-1589            AC006124.2         28569-29572         c
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p13.3"
     gene            1..1589
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /note="CIMAP1 family member D"
                     /db_xref="GeneID:284451"
                     /db_xref="HGNC:HGNC:26841"
     exon            1..363
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /inference="alignment:Splign:2.1.0"
     CDS             237..1106
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /note="isoform a is encoded by transcript variant 1; outer
                     dense fiber protein 3-like protein 2; outer dense fiber of
                     sperm tails 3 like 2; protein CIMAP1D"
                     /codon_start=1
                     /product="protein CIMAP1D isoform a"
                     /protein_id="NP_872383.1"
                     /db_xref="CCDS:CCDS12027.1"
                     /db_xref="GeneID:284451"
                     /db_xref="HGNC:HGNC:26841"
                     /translation="MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGS
                     GPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRS
                     CTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPA
                     PNAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQR
                     LPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTP
                     SRPAGHRLPGRCC"
     exon            364..471
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /inference="alignment:Splign:2.1.0"
     exon            472..585
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /inference="alignment:Splign:2.1.0"
     exon            586..1589
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1568..1573
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /note="hexamer: AATAAA"
     polyA_site      1589
                     /gene="CIMAP1D"
                     /gene_synonym="C19orf19; ODF3L2"
                     /note="major polyA site"
ORIGIN      
        1 actcgatccc ggccccactt ccaggccagt gtccggccga ccagcctgcc ttgggccagg
       61 gccccacgac tccctgctgc gggacaagag gccgtctgtg cggctgtggt cgtgggaggg
      121 tgtggtgagg ccgtgaaggt ggggacggtg cctgggcctg tggccgccag agctgctgcg
      181 gctcagaagg tagcaccagg ccccgtgggt gctgtggggg ccatcgcctg cccaccatgg
      241 ggaccctcag ctgcgactcc accccacggc tggccacagc cccccttggc cggcgagtga
      301 cggagggcca gattccggag accggcctga ggaagtcctg tgggacggcc accctggaga
      361 acggctcggg gccaggcttg tatgtcctgc cgtccaccgt gggcttcatc aaccacgact
      421 gcaccagggt ggccagtccc gcctactcgc tcgtccggag gcccagtgag gcaccacctc
      481 aggacaccag cccgggcccc atctacttct tggaccccaa agtcacacgc tttggccgca
      541 gctgcacccc tgcctactcc atgcagggcc gggccaagtc tcggggtccg gaggtgacgc
      601 caggccctgg ggcctacagc ccagagaagg tgccccctgt gcgccatcgg acaccgccgg
      661 ctttcaccct gggctgccgc ctccccctga agcccctgga cacctcagcc cctgccccta
      721 atgcctacac catgccccct ctgtggggct cacagatctt caccaagccc agcagcccca
      781 gctacacggt ggtgggccgc accccccccg cccgcccccc gcaggatcct gctgagatac
      841 caggcccggg ccagtacgac agcccggacg caaacaccta ccgccagcgc ctgcctgcct
      901 tcaccatgct ggggcggccc cgggccccgc gacccctgga ggagaccccc ggccctggcg
      961 cccactgccc agagcaggtc accgtgaaca aagccagggc tccagcgttc tctatgggca
     1021 tccgccactc gaaacgggcc agcaccatgg ccgccaccac gccctcccgg cctgcggggc
     1081 acaggctgcc cggccgctgc tgctaggcca ggcctgtttc ccacacagtg aacggggggc
     1141 tggcgggcct ctcctggggc ctggctttgg ctggaggggc tagaaggcga gaggggctgg
     1201 gaaaggagtc ttccctcccc tttcctgaac tgtccaggtc cttctaggac acctgatcct
     1261 tccagtccct gggggctgtg acccatggcc ctgtgcaggg tgcagggtga gtctccttcc
     1321 agtgccccag tttcttccag gtcacgccag gccaggccag gccaggtggg gaaagggaca
     1381 ccttccggcc ctccccagta gctggctgga gatggagctt cctgtgtccc agaactcggc
     1441 gtccagctcc actagggcct ggatccccat cacagcttgg gttagccccg gtcccagccc
     1501 aaactcaggc tggaggcagc cccgaggcct gtgcctttcc cactccacct tctacagttg
     1561 cttagccaat aaacctttcc tgggctgga
//
