LOCUS       NM_175881               1132 bp    mRNA    linear   PRI 02-APR-2024
DEFINITION  Homo sapiens ciliary microtubule associated protein 1C (CIMAP1C),
            mRNA.
ACCESSION   NM_175881
VERSION     NM_175881.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Leung,M.R., Zeng,J., Wang,X., Roelofs,M.C., Huang,W., Zenezini
            Chiozzi,R., Hevler,J.F., Heck,A.J.R., Dutcher,S.K., Brown,A.,
            Zhang,R. and Zeev-Ben-Mordehai,T.
  TITLE     Structural specializations of the sperm tail
  JOURNAL   Cell 186 (13), 2880-2896 (2023)
   PUBMED   37327785
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC039862.1 and AI393597.1.
            
            On Nov 22, 2018 this sequence version replaced NM_175881.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC039862.1, SRR5189667.93012.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2142586
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000332145.3/ ENSP00000329584.2
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1130              BC039862.1         64-1193
            1131-1132           AI393597.1         6-7                 c
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q24.2"
     gene            1..1132
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /note="ciliary microtubule associated protein 1C"
                     /db_xref="GeneID:161753"
                     /db_xref="HGNC:HGNC:28735"
     exon            1..277
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /inference="alignment:Splign:2.1.0"
     CDS             160..984
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /note="outer dense fiber protein 3-like protein 1; outer
                     dense fiber of sperm tails 3 like 1"
                     /codon_start=1
                     /product="protein CIMAP1C"
                     /protein_id="NP_787077.1"
                     /db_xref="CCDS:CCDS10285.1"
                     /db_xref="GeneID:161753"
                     /db_xref="HGNC:HGNC:28735"
                     /translation="MKLPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPA
                     KYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGMSSC
                     PQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNPAPNQ
                     YQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPT
                     YSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDIRD"
     exon            278..388
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /inference="alignment:Splign:2.1.0"
     exon            389..502
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /inference="alignment:Splign:2.1.0"
     exon            503..1132
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1132
                     /gene="CIMAP1C"
                     /gene_synonym="ODF3L1"
                     /note="major polyA site"
ORIGIN      
        1 agacagcctt agctgctcaa gctggagaac tgtcttcctt cccagcttcc tccgtgtctg
       61 gggtggggga tgggggggtc tcaggcaggg atactctagc cccttgactg ctgtttagac
      121 cctgctgtag ctgctgctgc tccctgccca gccccagcca tgaaactgcc caaggggacc
      181 aggagctctg tgtactttgc acagcaccca gaaaaggagc cattgccctc aaggcaggag
      241 gtcaagcaga cccctgtcat catggccaag atcaaaggtc cggggcccgc caagtacctc
      301 cggccatcct gcacgggcta catagatcat gacatctcca tgttcaaggc accagcttat
      361 accctgcata gccggcactc agagaagcgg atggtgtgcc acagcagccc tgggccttgc
      421 tatctcttgg atcccaaaat aactcggttt ggaatgtcca gctgcccgca ggtccccatg
      481 gaggagcgca tctccaacct gcgcctgaac cccaccctcg catcctgcca gtactacttt
      541 gagaagatcc acccaccggg ggaacgcagg gctccccagt acacgtttgg ctaccggcgc
      601 ccatacagag tgatggacct caacccggct cccaaccagt accagatgcc actcttgctg
      661 gggcccaaca cccctgtcag ccgagctgct ccctgctaca gtctggcctc cagggacaag
      721 aactggttct acaaggagga tgtggcagga ggccctggac ctaccacgta cgcccgacct
      781 gagccatcca tctatcagaa ccgcagccct acttacagca tggccaagcg cttcgcctac
      841 cctctggacc tcacgccacg gcctggcccc ggctcccacg aggtccagca ggtcactgtg
      901 cacaagcccc acatccctgc tttcaccatg ggcatcaagc actcactcca cctgtgccca
      961 ctggtcatcg acattcgtga ctgaggcccc tcttggggca ctcactgccc ctcatcccca
     1021 gaaattattt ttctacacca aattgagcaa tttgaccaag atttctagta gcagagccgg
     1081 tacctgctga gtgtccggca cacagaagac attagagata cattttcatg ta
//
