LOCUS       XM_047432240           11885 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens chondroitin sulfate synthase 1 (CHSY1),
            transcript variant X3, mRNA.
ACCESSION   XM_047432240
VERSION     XM_047432240.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000015.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11885
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
     gene            1..11885
                     /gene="CHSY1"
                     /gene_synonym="CHSY; ChSy-1; CSS1; TPBS"
                     /note="chondroitin sulfate synthase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 18 ESTs, 1045 long SRA reads, 1 Protein, and
                     94% coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:22856"
                     /db_xref="HGNC:HGNC:17198"
                     /db_xref="MIM:608183"
ORIGIN      
        1 ctcttctgct cactcgtccc caccttgttc tataggacgt ttggtggttc ctcctgccag
       61 gatgccttaa cgttgatatt cacggaaggc tgagggtcgg gggagtaata ggcaactcct
      121 tctttaacca ccagcctcat tattcattat tttctttatg tagtggattt ttgccagaca
      181 tgcattacaa tctcagatga ttctactcta tacccatttg tggggaatca ctgttctcta
      241 agaggaatta aaggagattt cacattctct ctctggcttg ccccgccacc cccgaccacc
      301 tccccccgca ccgcccccac ctatagacac actctgggtt gccctgggag ggcagtgggc
      361 agtgggatat tggatattgt gtttcagaag gtgtacaggc tcccacagac cctggctcag
      421 gcagggaagg gggacaggat ttacccaggg tggctgactt cgcacacatg gcgagggaga
      481 acctcctgcc tcatccacag aactgtggcc tggcaacatg agacctggca gagggaggag
      541 gggtggctgg aatgtgagga gacctaaggg gtatgcagag cagttggggt gggtcgaatt
      601 attcccagca agcaacatga ccagggttcc atattgaaag accaccccga caggttcaga
      661 gcaaggtgag gctggggcag aggagaccta agagatttct gcaacagcca ggtaagaaat
      721 gaagagaatc atagctgaga ggcttgcttg cgggctgcag aagagtgggt acatcggaga
      781 gactcgggag ctgcatctgg aagagtctgg tccctgaccc atctgggggt gcaggggctg
      841 gcaggtgttc ttagtcagtg catctttcat ggtacttaag aacagttctt gaacaattct
      901 cctaaccttg tttgtactgt tagtttgccc tgaattgtaa ccccagaaaa gacttttgtg
      961 acttttctgg tccaaaccag gcaggagaca aactgggacc aaattagtca ggagacttgc
     1021 tcgaggacac agcctgtgag aagcaggcca ggctccagcc cgtgtcttct tcgcgttgtg
     1081 tttacccgtc atgtgaaatg cagtaggact gcaaacctga ataattttgt cgatagatgg
     1141 catttttgcg taaaggcgtc tcttattttt tacgtggata ctctttaaaa tgaaaatcaa
     1201 aaaagttatt ctggaagtaa actggctcat gaaatgacaa catatggtga cagcatttcg
     1261 tcttattcaa cctagaatgt catcttagtt cccggatgat aagggatatt tggaatgagg
     1321 tatttatttt atgttgtaga atattggata actgccacag taccgggcat atagtgagta
     1381 ttcacaaaac attggttgcg tgaaacgaat tgtgtgagtc actttttctt gtatcttatt
     1441 cagaacgatg cttcagaggg cttttgtgac tcacttgtct ccagttgctg atgcagctgt
     1501 aatgctgtta gacacaggga tcaaatgaac atacgctgct gttcgtggtt ttgggggttc
     1561 tattttgggg agtgctatgt ctgtttttag tttcttgaaa ctgcctttta tgcacaaaac
     1621 cgaagtagac tgaatctata actgcagagc cacacagaat ctggtgcgtc gtgtttcctg
     1681 tccagcattg ccacttccag gtttttcatc taacttgaat aaaacatgtt tattttttac
     1741 agaatttcca caaaatttta tttttgaagt tgcttttcag aaaatctgtt tttaactggt
     1801 aaaatacatg tcacatctaa atacacagtt cagtcattta agtatgtaag ttgcgcaacc
     1861 agtctccaga actgtttcat ctgaaatgat gtgttttttg tttgttcgtt tgtttgtttt
     1921 tgagacggag tctcaccctg ccgcccaggc tggagtgcag tagcacaatc tcggctcact
     1981 gcaacttccg cctcctgggt tcaagcgatt ctcctgcctc agtctcctga gtagctggaa
     2041 ctacaggcgc gtgctaccac gcccggctaa ttttttgtat ttttagtaga gacggagttt
     2101 caccatgtta gccaggatgg tctccatctc ctgacctcat gatccaccca cctcggcctc
     2161 ccaaagtgca gggattacag gcatgagcca ctgcgcccgg ccgcagtgat gttttttgaa
     2221 ggagttctgt tagaattgaa aaggtaggaa gctggaggcg cagtgtccac aaatgtaaca
     2281 gagtgtcttg gtgtcaggaa aacacagcag ggcacaggtc aggcatgtgg tttgggcagc
     2341 agcagtggga gcagggagca gctcagtggt agatgggaag gcaaactgct taggaggatg
     2401 ccacacttag gaatgagttt ctttaggcga agtctgcacg tgcctggttt acctccagta
     2461 agtggggctc cagcataaag gtgaaggctc tggatcacag ccagcagact ctttgtgctg
     2521 tgtaaagggt tggcgggtaa atgttttagg gtttttgcag gccgtgggat ctcgctccca
     2581 gctgctcagc ttagccactg taatgcaaaa acagctgtag acagtaacaa aagtgagtgt
     2641 aactgtgtcc cagtagaagt tttaatgggg gattttggcc agtgggccgt agtgtgccga
     2701 cccctgccct gagttacaga tgtaagtgtt tctgttttgg gcctggtact acgactgctg
     2761 tttcctctca agttatccag tttttgaaag tacgctttct ccgcagtgag atgggagcag
     2821 tacctgtaaa acctgtgcct ggcatgcgat gacatgagat aatctgtaaa atgccactcg
     2881 gaaagtagaa gttactgatg tgttttttgt gagcggtgac tctgaaaact ggcttttaaa
     2941 tcatagttcg ttcatgggtt cccgtgttta atgtagtagc caacttaaga cttacgagag
     3001 ggccaaacca ccgtcacaga cacccgagag gacgcagcag agacagatgt taatttctct
     3061 gtccagtaac gggatggctt ttccaggatt tcgggggact gtgttccttg tcattgaggg
     3121 gtccagggtc ttccattttg ctttactgcc gtctcctgtg gcattgtcct tcaccggtca
     3181 gtagcgtggc tgctgtgctt aggtgacaga cagctgcagg agaggaaaga gcctggagac
     3241 acagagctca gagccaggtc ttaagcacaa gccaaaaggg gagcgggtct ctcactcaca
     3301 ctctgcttgg gggggtcttg gttcacacct aactggacag aaggcccgat agccggagtc
     3361 agaccacagt ctgtcaccac aggggaaggg ggacagatac attggcgatg aggtcgcagt
     3421 ctgtgcgacg tgacggaaac aaatccttac atcccaaagt gagtccccag caggctttcc
     3481 tctctttggt ggactgggtt tttgtttctc aggtttcaga tataaggcgt ccaaatacca
     3541 ctcgcggaat tcttagcgta taccaaggtc agatgtttaa gaaatgctat tgcacaatgt
     3601 agtttaattg acttttaggt ttaaaagctc ctaatttgag attcaaatag gcttctaaca
     3661 agtatttcca ttcgtaagaa tcctggcttc ttaggaatcg gtcacctgta tttgtagttt
     3721 tggttttgct gtatagtaat ttaacattat atacatttat agctttacat tatataagga
     3781 atttatcatt taacattata aattgtttat aatttaacat tatataaatg ccgtaatttg
     3841 gggtgtcctt agatatttgc cctgaatttg tctctcctag aaaatcattc tggctgtaat
     3901 cgtagataca aggacttggg aatcttctca gagtataaac cagcagatca gtccagatgg
     3961 aaacgtttcc cttagggttc cttcctttaa atttgtgtta tatggctttt agttcttcct
     4021 ctgccataac aggtgagctt gggaatacat ttgtgattaa acttacattt gggcaggtat
     4081 ggaagtgtct tgtgattagt taccaaagct taacgtgacc tttaaataag gaacataatt
     4141 aatgggcttc cagtcaaata tatcaataat ttgagggaag aatcttaaat tgccaggcat
     4201 tgcctctccc cactccttcc acccgttggg gctggccttg aactcctggg ctcaagtgat
     4261 cctcctgcct cagcctcctg agtagcttgg actacaggca tgtaccaccg cacctggccg
     4321 gaaaatctca aattgcataa tgccactttc tttgggaaga aatcaagcaa aatttgtgat
     4381 tcttgagtat ctgtatagat gtatacttgt gaagtaggta aacaaagaat aaaagaatta
     4441 agactaaaca tgctttgccc ctttttgttc taggaatgta ccagtagttc actgaattgc
     4501 tggggtcaca tacagccaat gtggtatatt gaagggtttt tttaaaatta ttttttcttt
     4561 caaatacaaa tgaggtcttg ctatatttct taggctgtcc tcgagctcct gagctctagc
     4621 ggttcccttg ccttgacctc ccaaagtgct gggattatag gcatgagcca ccatgcccag
     4681 cctatatcga atgtttgaca aatacatttg aagccagggc atttacattt aaattgtggc
     4741 tttattgctg gtgttggcta atcgtcctat agttcgcata gtgtatatgg ttcctagtgt
     4801 atatagttta tagtctagtc atggatctcg gggtgtaatc ccgcttggtg gcattacagt
     4861 gctgtggctt ctctcaagtt agtttgacat gagttatacc ctaagataat aacagtggtt
     4921 atcactaggt agacagaata ggtttaatgt ttctttttac ctctctgagt tttcctggtt
     4981 tctgccagta aacatgggtt atgccgtaaa ccttcccact tctgacacct ggccttcaca
     5041 tcagcatggg acaccagaaa gtgcctgaat aagagccagc aaagaaaaat gttttcattt
     5101 cttctagtgt aatttatact tatggatctc atgagaatta cattgtttag ttagggtatg
     5161 cttattttac atatatgttt tttttttttt ttttgagact gcttctcgct ctgtcaccca
     5221 cgctggagta cagtgctgtg atcttggctc actctgtctc ccaggttcaa gtcattcttc
     5281 cgcctcagct ggaattacag gcgccctcca ctacacctgg ctaatttttg tatttttagt
     5341 agagacaggg tttcaccacg ttagccaagc tgatctcgaa ctcctgacct caagtgattc
     5401 acctgcctca gcctcccaaa gtgttgggat tacaggcatg agccactgct cctggtcttg
     5461 tatgtccatt tttaatattt atatataatt tatattaact aactggggtg tcgacactat
     5521 gtatctggaa tttgaatcta tttgatagtc tctcctgcaa ttacctcctc cctggagaca
     5581 gggttttttt tttttttttt tgagacggag tcttgctgtc acccaagctg gagtgcagtg
     5641 gcactatctc ggctcactgc aagctccgcc tcccaggttc acaccattct ctcgcctcag
     5701 cctcctgagt agctaggact acaggcaccc gccaccacgc ccggttaatt ttgtttttgt
     5761 atttttagta gaaacagggt ttcaccgtgt tagctagtat ggtttcgatc tcctgacctc
     5821 atgatctgcc cgtctcagcc tcccaaggtg ctgggattag aggcatgggc caccacaccc
     5881 ggccagcttt taaataaaaa atgtaataaa aagtttgtag ctttcggttg acacatgact
     5941 tataccttta ccattagcct ttaaactttc tcacatctgt gaaatttttg ttgttcttat
     6001 agcttataat tttcatgtct ctttttcttt ggttgaaatc ctgacacaaa tagtaggata
     6061 gcttggtttt atttagcagt taatgttgtt aactatttca ggaaaataag atgatccaaa
     6121 atatgattat tgctcaggtg tgatatatga gtatgtaagt actgtatagt ttgcaaagta
     6181 taattagttt tgtaatctta tatgtgaata tgttgcatta gaaggaatat ttttcaaatg
     6241 tcagagtagg attatgagtg attcctcccg tttccagaat tttataataa gtatatattg
     6301 ttttataata ataaagaagg tttaaaaata gttcatcgta agtgatgtaa atgtttctac
     6361 ttgacggcat tttaagagtc gcgtgggtta tgggcgagct tatgaaatgc ggtttgtaag
     6421 actacttttc attcatgaat ccctctattt cattgtagtc agtctgttat aagacatatg
     6481 ttgtggaatc tgttcaaaac ctggggagga agtgcatgag atcttatctt cttggcatca
     6541 gaagtgtact cttgaaagta gaattttgac tttttgagat gccactgttt atcctcccac
     6601 ccttcacagc tctccctgtc tcccttctcc caacccaacc catgcataca aaaagtcagg
     6661 gtttgtgatt taatttagaa atagaggcaa gattagaaaa tggaattgtg tggagacttg
     6721 gagatcatgt agcatgcagc agatctgttc taggaggagt aggaagctct ggttgtgagt
     6781 gattgaagac cactgcactg ttcagaagca gctgtcgcat cctcttccgt tcagcacctg
     6841 attattatgt agctttattt aatggtgcaa aataccaagt agagaacaag gaacataagg
     6901 gcaaaattaa tggctggata gctgttgtgg ctacgtaatt ctgatctaaa attagtttag
     6961 aaattacaat tgaaaatgca attgtgaaat atcattttga aatactttaa aatgctgcct
     7021 agcctactga aatgtttctc agttgaggta cccatgtaaa atgtgtgcgt acacatggac
     7081 acacaaacag gctaagaaag aagcagagga gtagagacat ttaattagtt gagacaggtt
     7141 tacctccaat gaaatttttc ttttctttca gtttgtagca cgtgggtggt ctatgtgtta
     7201 atgttaataa taaaacagaa gttacccatt cttagattac ttaactctac tgtcactagt
     7261 gatggctttc ctgccgaagg cgctccgtag ctacatgaag agggcacaga gaaaattact
     7321 tgaagctttc gagtcacttt cacttttaaa agatgctggt ggcctttgga tcccactttg
     7381 ccctggtgct tggccaaggc cagggcatct gaccgcccct gagcacatgg aggaagaagg
     7441 tggtagaggg aggtgtggaa atccacgctg atggccctac ccttgctggt gccctctgtt
     7501 gctgggactc agtgccccac ctgctcacca agcagaagtg atgtcagagt ggtctccatg
     7561 gccaagagag caggttttgt caggcaagga aggagcgtga agatgcacac tctcctggtg
     7621 tggagcatgg tgctatcccc agcgtgtctt cctcggtgcc aggagtgttg gtattgtgtg
     7681 cacattaaat agaggacttt cccactcttc tctttactct tatgcattat ctgacccaaa
     7741 tttgggtcca tggagtaaac atacttggtc agaaactgtg aatagtcatt tccagcattt
     7801 aaacctttct tgctgatgac gccattaaaa tacgcacatg tgcatgcaca cagcgtgact
     7861 gcggctggag aggaaggagc gttcgcctgc tcccgggcag ctggtcaggc tggtggccca
     7921 gccgtttatg cttgctccgt gctccagggt gtggcccctt gcccagggga agaaatgaat
     7981 gttctgaaag agcacagcgt attcttcagt ctgctccaag gttgattccc tctggaaagc
     8041 ttccctggcc ccctcactgc tgtctggtct ccctcaggtt ttccctgctg gagaggcctt
     8101 ccctgaccca aggatatgat gctgcagccc tgccctcgct gctgtctccc cagcttcgtg
     8161 gttctccaaa gctctcatcc ccgtctgaca cactccttgt ttgttgcctg cttgccggac
     8221 aggcatttct agttgtcttg tcaagaacca gcccgagaga gagctgagag ccaacctcgg
     8281 ctttgctgtg tgcagtggct gcggggtgtg agcaagttgc tgaacgcaca aactagagta
     8341 tccctgaaag taaaacgtgc acagtaacag agctacctcg tcggattaca ccagtgcata
     8401 cagggacaaa agggtgagaa aaccacttct ctgtaatgaa ctgaaacgct gcctaagtcc
     8461 gaatgggaag ttgtcgctct gtagcagtga tggtctgtag ctgaggctga accgtgtacg
     8521 tgctgaagga cagtcatgta aacagttaac aggaagaacg aggacttaat gagaatgttg
     8581 gctctccttg cagcggacaa gaaggacatt tgctaatgaa gactgtggaa gatgcagcag
     8641 cttttttatg agaattacga gcagaacaaa aaggggtaca ttagagatct ccataacagt
     8701 aaaattcacc aagctatcac attacacccc aacaaaaacc caccctacca gtacaggctc
     8761 cacagctaca tgctgagccg caagatatcc gagctccgcc atcgcacaat acagctgcac
     8821 cgcgaaattg tcctgatgag caaatacagc aacacagaaa ttcataaaga ggacctccag
     8881 ctgggaatcc ctccctcctt catgaggttt cagccccgcc agcgagagga gattctggaa
     8941 tgggagtttc tgactggaaa atacttgtat tcggcagttg acggccagcc ccctcgaaga
     9001 ggaatggact ccgcccagag ggaagccttg gacgacattg tcatgcaggt catggagatg
     9061 atcaatgcca acgccaagac cagagggcgc atcattgact tcaaagagat ccagtacggc
     9121 taccgccggg tgaaccccat gtatggggct gagtacatcc tggacctgct gcttctgtac
     9181 aaaaagcaca aagggaagaa aatgacggtc cctgtgagga ggcacgcgta tttacagcag
     9241 actttcagca aaatccagtt tgtggagcat gaggagctgg atgcacaaga gttggccaag
     9301 agaatcaatc aggaatctgg atccttgtcc tttctctcaa actccctgaa gaagctcgtc
     9361 ccctttcagc tccctgggtc gaagagtgag cacaaagaac ccaaagataa aaagataaac
     9421 atactgattc ctttgtctgg gcgtttcgac atgtttgtga gatttatggg aaactttgag
     9481 aagacgtgtc ttatccccaa tcagaacgtc aagctcgtgg ttctgctttt caattctgac
     9541 tccaaccctg acaaggccaa acaagttgaa ctgatgagag attaccgcat taagtaccct
     9601 aaagccgaca tgcagatttt gcctgtgtct ggagagtttt caagagccct ggccctggaa
     9661 gtaggatcct cccagtttaa caatgaatct ttgctcttct tctgcgacgt cgacctcgtg
     9721 tttactacag aattccttca gcgatgtcga gcaaatacag ttctgggcca acaaatatat
     9781 tttccaatca tcttcagcca gtatgaccca aagattgttt atagtgggaa agttcccagt
     9841 gacaaccatt ttgcctttac tcagaaaact ggcttctgga gaaactatgg gtttggcatc
     9901 acgtgtattt ataagggaga tcttgtccga gtgggtggct ttgatgtttc catccaaggc
     9961 tgggggctgg aggatgtgga ccttttcaac aaggttgtcc aggcaggttt gaagacgttt
    10021 aggagccagg aagtaggagt agtccacgtc caccatcctg tcttttgtga tcccaatctt
    10081 gaccccaaac agtacaaaat gtgcttgggg tccaaagcat cgacctatgg gtccacccag
    10141 cagctggctg agatgtggct ggaaaaaaat gatccaagtt acagtaaaag cagcaataat
    10201 aatggctcag tgaggacagc ctaatgtcca gctttgctgg aaaagacgtt tttaattatc
    10261 taatttattt ttcaaaaatt ttttgtatga tcagtttttg aagtccgtat acaaggatat
    10321 attttacaag tggttttctt acataggact cctttaagat tgagctttct gaacaagaag
    10381 gtgatcagtg tttgcctttg aacacatctt cttgctgaac attatgtagc agacctgctt
    10441 aactttgact tgaaatgtac ctgatgaaca aaactttttt aaaaaaatgt tttcttttga
    10501 gaccctttgc tccagtccta tggcagaaaa cgtgaacatt cctgcaaagt attattgtaa
    10561 caaaacactg taactctggt aaatgttctg ttgtgattgt taacattcca cagattctac
    10621 cttttgtgtt ttgttttttt tttttacaat tgttttaaag ccatttcatg ttccagttgt
    10681 aagataagga aatgtgataa tagctgtttc atcattgtct tcaggagagc tttccagagt
    10741 tgatcatttc ctctcatggt actctgctca gcatggccac gtaggttttt tgtttgtttt
    10801 gttttgttct ttttttgaga cggagtctca ctctgttacc caggctggaa tgcagtggcg
    10861 caatcttggc tcactttaac ctccacttcc ctggttcaag caattcccct gcctttgcct
    10921 cccgagtagc tgggattaca ggcacacacc accacgccca gctagttttt ttgtattttt
    10981 agtagagacg gggtttcacc atgcaagccc agctggccac gtaggtttta aagcaagggg
    11041 cgtgaagaag gcacagtgag gtatgtggct gttctcgtgg tagttcattc ggcctaaata
    11101 gacctggcat taaatttcaa gaaggatttg gcattttctc ttcttgaccc ttctctttaa
    11161 agggtaaaat attaatgttt agaatgacaa agatgaatta ttacaataaa tctgatgtac
    11221 acagactgaa acatacacac atacacccta atcaaaacgt tggggaaaaa tgtatttggt
    11281 tttgttcctt tcatcctgtc tgtgttatgt gggtggagat ggttttcatt ctttcattac
    11341 tgttttgttt tatcctttgt atctgaaata cctttaattt atttaatatc tgttgttcag
    11401 agctctgcca tttcttgagt acctgttagt tagtattatt tatgtgtatc gggagtgtgt
    11461 ttagtctgtt ttatttgcag taaaccgatc tccaaagatt tccttttgga aacgcttttt
    11521 cccctcctta atttttatat tccttactgt tttactaaat attaagtgtt ctttgacaat
    11581 tttggtgctc atgtgttttg gggacaaaag tgaaatgaat ctgtcattat accagaaagt
    11641 taaattctca gatcaaatgt gccttaataa atttgttttc atttagattt caaacagtga
    11701 tagacttgcc attttaatac acgtcattgg agggctgcgt atttgtaaat agcctgatgc
    11761 tcatttggaa aaataaacca gtgaacaata tttttctatt gtacttttcg aaccattttg
    11821 tctcattatt cctgttttag ctgaagaatt gtattacatt tggagagtaa aaaacttaaa
    11881 cacga
//
