LOCUS       XM_011513254            4186 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens chordin (CHRD), transcript variant X5,
            mRNA.
ACCESSION   XM_011513254
VERSION     XM_011513254.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011513254.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4186
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..4186
                     /gene="CHRD"
                     /note="chordin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 31 ESTs, 101
                     long SRA reads, 3 Proteins, and 82% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     23 samples with support for all annotated introns"
                     /db_xref="GeneID:8646"
                     /db_xref="HGNC:HGNC:1949"
                     /db_xref="MIM:603475"
     CDS             266..2869
                     /gene="CHRD"
                     /codon_start=1
                     /product="chordin isoform X5"
                     /protein_id="XP_011511556.1"
                     /db_xref="GeneID:8646"
                     /db_xref="HGNC:HGNC:1949"
                     /db_xref="MIM:603475"
                     /translation="MPSLPAPPAPLLLLGLLLLGSRPARGAGPEPPVLPIRSEKEPLP
                     VRGAAGCTFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWGRRTRGPGRVSCKNI
                     KPECPTPACGQPRQLPGHCCQTCPQERSSSERQPSGLSFEYPRDPEHRSYSDRGEPGA
                     EERARGDGHTDFVALLTGPRSQAVARARVSLLRSSLRFSISYRRLDRPTRIRFSDSNG
                     SVLFEHPAAPTQDGLVCGVWRAVPRLSLRLLRAEQLHVALVTLTHPSGEVWGPLIRHR
                     ALAAETFSAILTLEGPPQQGVGGITLLTLSDTEDSLHFLLLFRGLLEPRSGGLTQVPL
                     RLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALEWAGRPGLR
                     ISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEV
                     VAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTK
                     DFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLH
                     YEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
                     GMASLMITTKGSPRGELRGQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRD
                     LPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGTGEVHCEKV
                     QCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPMQADGPRGCRFAGQWFPESQSWH
                     PSVPPFGEMSCITCRCGAGVPHCERDDCSLPLSCGSGKESRCCSRCTAHRRPAPETRT
                     DPELEKEAEGS"
ORIGIN      
        1 gcagtagagc cgcgtacggc ccgggtcagc gcccgcccgc ccgcgctcct cccggccgct
       61 cctcccgccc cgcccggccc ggcgccgact ctgcggccgc ccgacgagcc cctcgcggca
      121 ctgccccggc cccggccccg gccccggccc cctcccgccg caccgccccc ggcccggccc
      181 tccgccctcc gcactcccgc ctccctccct ccgcccgctc ccgcgccctc ctccctccct
      241 cctccccagc tgtcccgttc gcgtcatgcc gagcctcccg gccccgccgg ccccgctgct
      301 gctcctcggg ctgctgctgc tcggctcccg gccggcccgc ggcgccggcc cagagccccc
      361 cgtgctgccc atccgttctg agaaggagcc gctgcccgtt cggggagcgg caggctgcac
      421 cttcggcggg aaggtctatg ccttggacga gacgtggcac ccggacctag gggagccatt
      481 cggggtgatg cgctgcgtgc tgtgcgcctg cgaggcgcct cagtggggtc gccgtaccag
      541 gggccctggc agggtcagct gcaagaacat caaaccagag tgcccaaccc cggcctgtgg
      601 gcagccgcgc cagctgccgg gacactgctg ccagacctgc ccccaggagc gcagcagttc
      661 ggagcggcag ccgagcggcc tgtccttcga gtatccgcgg gacccggagc atcgcagtta
      721 tagcgaccgc ggggagccag gcgctgagga gcgggcccgt ggtgacggcc acacggactt
      781 cgtggcgctg ctgacagggc cgaggtcgca ggcggtggca cgagcccgag tctcgctgct
      841 gcgctctagc ctccgcttct ctatctccta caggcggctg gaccgcccta ccaggatccg
      901 cttctcagac tccaatggca gtgtcctgtt tgagcaccct gcagccccca cccaagatgg
      961 cctggtctgt ggggtgtggc gggcagtgcc tcggttgtct ctgcggctcc ttagggcaga
     1021 acagctgcat gtggcacttg tgacactcac tcacccttca ggggaggtct gggggcctct
     1081 catccggcac cgggccctgg ctgcagagac cttcagtgcc atcctgactc tagaaggccc
     1141 cccacagcag ggcgtagggg gcatcaccct gctcactctc agtgacacag aggactcctt
     1201 gcattttttg ctgctcttcc gagggctgct ggaacccagg agtgggggac taacccaggt
     1261 tcccttgagg ctccagattc tacaccaggg gcagctactg cgagaacttc aggccaatgt
     1321 ctcagcccag gaaccaggct ttgctgaggt gctgcccaac ctgacagtcc aggagatgga
     1381 ctggctggtg ctgggggagc tgcagatggc cctggagtgg gcaggcaggc cagggctgcg
     1441 catcagtgga cacattgctg ccaggaagag ctgcgacgtc ctgcaaagtg tcctttgtgg
     1501 ggctgatgcc ctgatcccag tccagacggg tgctgccggc tcagccagcc tcacgctgct
     1561 aggaaatggc tccctgatct atcaggtgca agtggtaggg acaagcagtg aggtggtggc
     1621 catgacactg gagaccaagc ctcagcggag ggatcagcgc actgtcctgt gccacatggc
     1681 tggactccag ccaggaggac acacggccgt gggtatctgc cctgggctgg gtgcccgagg
     1741 ggctcatatg ctgctgcaga atgagctctt cctgaacgtg ggcaccaagg acttcccaga
     1801 cggagagctt cgggggcacg tggctgccct gccctactgt gggcatagcg cccgccatga
     1861 cacgctgccc gtgcccctag caggagccct ggtgctaccc cctgtgaaga gccaagcagc
     1921 agggcacgcc tggctttcct tggataccca ctgtcacctg cactatgaag tgctgctggc
     1981 tgggcttggt ggctcagaac aaggcactgt cactgcccac ctccttgggc ctcctggaac
     2041 gccagggcct cggcggctgc tgaagggatt ctatggctca gaggcccagg gtgtggtgaa
     2101 ggacctggag ccggaactgc tgcggcacct ggcaaaaggc atggcctccc tgatgatcac
     2161 caccaagggt agccccagag gggagctccg agggcagaga cgaacggtga tctgtgaccc
     2221 ggtggtgtgc ccaccgccca gctgcccaca cccggtgcag gctcccgacc agtgctgccc
     2281 tgtttgccct gagaaacaag atgtcagaga cttgccaggg ctgccaagga gccgggaccc
     2341 aggagagggc tgctattttg atggtgaccg gagctggcgg gcagcgggta cgcggtggca
     2401 ccccgttgtg cccccctttg gcttaattaa gtgtgctgtc tgcacctgca aggggggcac
     2461 tggagaggtg cactgtgaga aggtgcagtg tccccggctg gcctgtgccc agcctgtgcg
     2521 tgtcaacccc accgactgct gcaaacagtg tccagtgggg tcgggggccc acccccagct
     2581 gggggacccc atgcaggctg atgggccccg gggctgccgt tttgctgggc agtggttccc
     2641 agagagtcag agctggcacc cctcagtgcc cccttttgga gagatgagct gtatcacctg
     2701 cagatgtggg gcaggggtgc ctcactgtga gcgggatgac tgttcactgc cactgtcctg
     2761 tggctcgggg aaggagagtc gatgctgttc ccgctgcacg gcccaccggc ggccagcccc
     2821 agagaccaga actgatccag agctggagaa agaagccgaa ggctcttagg gagcagccag
     2881 agggccaagt gaccaagagg atggggcctg agctggggaa ggggtggcat cgaggacctt
     2941 cttgcattct cctgtgggaa gcccagtgcc tttgctcctc tgtcctgcct ctactcccac
     3001 ccccactacc tctgggaacc acagctccac aagggggaga ggcagctggg ccagaccgag
     3061 gtcacagcca ctccaagtcc tgccctgcca ccctcggcct ctgtcctgga agccccaccc
     3121 ctttcctcct gtacataatg tcactggctt gttgggattt ttaatttatc ttcactcagc
     3181 accaagggcc cccgacactc cactcctgct gcccctgagc tgagcagagt cattattgga
     3241 gagttttgta tttattaaaa catttctttt tcagtctttg ggcatgaggt tggctctttg
     3301 tggccaggaa cctgagtggg gcctggtgga gaaggggcag agagtaggag gtgagagaga
     3361 ggagctctga cacttgggga gctgaaagag acctggagag gcagaggata gcgtggcagt
     3421 tggctggcat gcctgggttc cgcagagggg ctggggatgg ttcttgagat ggtctagaga
     3481 ctcaagaatt tagggaagta gaagcaggat tttgactcaa gtttagtttc ccacatcgct
     3541 ggcctgtttg ctgacttcat gtttgaagtt gctccagaga gagaatcaaa ggtgtcacca
     3601 gcccctctct ccctccttcc cttcccttcc ctttctttcc ctcccctccc ctcccctccc
     3661 ctcccctccc ctcccctccc cttcccttca ctctcccttc cctctccctt cccttccctt
     3721 ctccttcgtt cacagcaatg gggtcttgct atgttgccca ggctggtctt gaactcctgg
     3781 cctcaagtga tcctcctgcc ttggccttcc aaagtgttgg gattacaggc atgagccacc
     3841 acacccagcc cagcctctac cttctttgtc taaagtgagg caaacacttt tctgtttttt
     3901 tcctggaaac tcgtgttctg gaccagttct ggggcaaact ggggtcagag tggattggaa
     3961 tcagctctga tccagctttt ggctgtgctt accttgagac caaatcatgt agagaataag
     4021 acaagaccct cctgccctgt taccctcttc tctctcccct ccctcattcc taccatcaag
     4081 acccaggcat tttgacaagc tctaggaaat gagggtatca gaacagaaat ctaacaaatg
     4141 tatgtagctg cagatccatc tttcatataa acaatgtgga gtcaaa
//
