LOCUS       XM_005260576            6705 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens chromodomain helicase DNA binding protein 6
            (CHD6), transcript variant X15, mRNA.
ACCESSION   XM_005260576
VERSION     XM_005260576.5
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000020.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005260576.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6705
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
     gene            1..6705
                     /gene="CHD6"
                     /gene_synonym="CHD-6; CHD5; RIGB"
                     /note="chromodomain helicase DNA binding protein 6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 23 ESTs, 1274 long SRA reads, 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 109 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:84181"
                     /db_xref="HGNC:HGNC:19057"
                     /db_xref="MIM:616114"
     CDS             101..4195
                     /gene="CHD6"
                     /gene_synonym="CHD-6; CHD5; RIGB"
                     /codon_start=1
                     /product="chromodomain-helicase-DNA-binding protein 6
                     isoform X11"
                     /protein_id="XP_005260633.1"
                     /db_xref="GeneID:84181"
                     /db_xref="HGNC:HGNC:19057"
                     /db_xref="MIM:616114"
                     /translation="MASRNKRRVPVMEVMAFLAKRRMTAGQDGSDPDKSPWPVSSALT
                     ARLRRLVTVYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDLINKEAQKRWTRR
                     EQADFYRTVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEQYFYSFVAMCRNVCR
                     LPTWKDGGPPDTTIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLQLCRPSL
                     YLPVWWECGKHDRDLLIGTAKHGLNRTDCYIMNDPQLSFLDAYRNYAQHKRSGTQAPG
                     NLCCLYQTNSKLYESLTYSQMSRTSESLENEPENLVRVESRDDHLSLPDVTCENFISK
                     VQDVISINHDESLLPESLESMMYGKKVLSQEPSSFQESPSTNTESRKDVITISISKDG
                     NCQSGGPEAEIASGPTFMGSLEAGGVAQANIKNGKHLLMSISKEGELCCSEAGQRPEN
                     IGQLEAKCLASPSLNPGNESGFVDMCSLSVCDSKRNLSSDQQLIDLLENKSLESKLIL
                     SQNHSDEEEEEEENEEENLAMAVGMGERPEVLHLTEPTTNISREKNQGFQDETKKGSL
                     EVANQTPGLQRAFPAPAACQCHCKHMERWMHGLENDEFEIEKPKAYIPDLFKSKTNTI
                     AMEGEPTAIPSQPFKVKHELLKEPWKESAEGQNVFPTYPLEGSELKSEDMDFENKDDY
                     DRDGNCHSQDYPGKYSEEESKSSTSGITGDIGDELQEARAPTIAQLLQEKTLYSFSEW
                     PKDRVIINRLDNICHVVLKGKWPSSQQYEPSGTLPTPVLTSSAGSRTSLSEPEAAEHS
                     FSNGAALAAQIHKESFLAPVFTKDEQKHRRPYEFEVERDAKARGLEQFSATHGHTPII
                     LNGWHGESAMDLSCSSEGSPGATSPFPVSASTPKIGAISSLQGALGMDLSGILQAGLI
                     HPVTGQIVNGSLRRDDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAT
                     LSTTHPEGPGPATSAPEPATAASSQAEKSIPSKSLLDWLRQQADYSLEVPGFGANFSD
                     KPKQRRPRCKEPGKLDVSSLSGEERVPAIPKEPGLRGFLPENKFNHTLAEPILRDTGP
                     RRRGRRPRSELLKAPSIVADSPSGMGPLFMNGLIAGMDLVGLQNMRNMPGIPLTGLVG
                     FPAGFATMPTGEEVKSTLSMLPMMLPGMAAVPQMFGVGGLLSPPMATTCTSTAPASLS
                     STTKSGTAVTEKTAEDKPSSHDVKTDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFL
                     IPGVSPGLIYPSMFLSPGMGMALPAMQQARHSEIVGLESQKRKKKKTKGDNPNSHPEP
                     APSCEREPSGDENCAEPSAPLPAEREHGAQAGEGALKDSNNDTN"
ORIGIN      
        1 gagaagtccc tttctgcaga acagggtgtt acagatggga cctcagacat tcctgaaaga
       61 ggcaacacag ataaagaaga caatgctgag gacaaagtag atggcctcca gaaacaaacg
      121 gagagttcca gtgatggagg tgatggcgtt tttagcgaaa agaaggatga cagccgggca
      181 ggatggctcc gacccagaca aatcgccctg gccagtttcc tccgccctca cagctcgtct
      241 cagacgtctg gtcactgttt accagcgctg caaccgcaag gaactgtgcc ggcctgaaat
      301 tctgggacca ggtaaccaag gatattgggt tcaggaagag atgttcagga gaacctcaga
      361 aatggacctc atcaacaagg aagcccaaaa gaggtggact aggagagaac aagcagactt
      421 ctatagaaca gtgtcttcct ttggtgttgt ttacgatcaa gaaaagaaaa cctttgactg
      481 gacacagttc cgcatcattt cccgtttgga caagaagtcg gatgagagcc tggaacagta
      541 tttttatagt tttgtggcca tgtgccggaa tgtctgtcgt ctacccacat ggaaagatgg
      601 cggtccccca gataccacca tctacgttga acccatcact gaggaacgtg ctgcaagaac
      661 tctgtaccgc attgaactgt tacggaaagt ccgagagcaa gtgctcaagt gccctcagct
      721 gcatgaacgc ctccagctgt gcaggcccag cctctacctc ccagtctggt gggagtgtgg
      781 gaagcatgat cgagacctgc tcatcggcac tgccaaacat gggctgaacc gcactgactg
      841 ttacatcatg aacgaccccc agctgtcctt cctggatgcc tatagaaact atgcccagca
      901 taaaagatct ggcacccagg caccaggaaa tctctgttgc ctttaccaga ccaactccaa
      961 gttatatgaa tctcttacat attctcaaat gagtaggact tcagagtccc ttgaaaatga
     1021 acctgaaaat ctagtgagag tagaaagcag agatgatcat ctcagcctgc ctgatgtgac
     1081 atgtgaaaac tttatttcta aagttcagga tgtcatttcc atcaaccatg atgaaagtct
     1141 gctgcctgag tccttagaga gcatgatgta tggtaagaag gtgctcagcc aagaaccaag
     1201 ctcttttcag gagagcccaa gtaccaatac tgaatctaga aaagatgtta ttaccatctc
     1261 aataagcaaa gatgggaact gccagtctgg tggccctgag gcagaaatag cttctggccc
     1321 tacttttatg ggtagcttag aagcaggagg agtagctcaa gcaaacatca aaaatggaaa
     1381 acatttgttg atgtctattt caaaggaagg ggagctctgc tgcagtgagg caggacagag
     1441 acctgaaaac attggccagc tggaagccaa gtgtttagct tccccttcct tgaatccagg
     1501 aaatgaaagt gggtttgtag atatgtgcag tcttagtgtc tgtgactcca aaagaaacct
     1561 gtcatcagat cagcaattaa ttgatttatt ggaaaacaaa agcttagaaa gtaaattgat
     1621 tttgagtcag aaccacagtg atgaggagga agaagaggag gaaaacgagg aggaaaactt
     1681 agccatggca gtaggcatgg gggaaaggcc agaggtattg catctcacgg agcccactac
     1741 taacatctca agggaaaaga accaaggctt ccaagatgaa accaagaaag gaagcttaga
     1801 ggtggcaaac cagactcctg ggctacagag ggctttcccc gctccagcag cctgtcagtg
     1861 ccactgcaaa cacatggaga ggtggatgca tggcctcgag aatgatgaat ttgaaatcga
     1921 gaaacccaag gcttatatcc cagatctgtt caaaagtaaa accaatacta tcgccatgga
     1981 gggtgaaccc actgctattc catcacagcc gtttaaagtg aagcatgagc ttttaaaaga
     2041 accttggaaa gaaagtgcag aggggcaaaa cgttttcccc acatatcctc ttgaaggaag
     2101 tgagctcaaa tcagaagaca tggattttga gaataaagat gattatgata gagacggaaa
     2161 ctgccatagt caagattatc cagggaagta ctctgaagag gagagcaaga gctcaacatc
     2221 gggcatcaca ggagacattg gggatgagct acaggaggct cgagctccca ctattgctca
     2281 gctgctacag gagaaaactc tctattcctt ctctgagtgg ccaaaggacc gcgtgataat
     2341 taaccgccta gataatatct gccacgtggt gttaaagggg aagtggccct ctagccagca
     2401 gtatgagccc tcaggcacac tgcccacccc ggtattaacc agcagtgctg gttctcgaac
     2461 cagcctctca gagccggaag cagcagaaca cagcttcagc aacggcgcag cattggcggc
     2521 ccagatccac aaggagagct tcttagctcc agtattcaca aaggatgaac aaaagcacag
     2581 gcgtccctat gagtttgagg tggagaggga tgcaaaggct cggggcctgg agcagttctc
     2641 tgccacccac gggcacaccc ctatcatcct caatggctgg catggggagt cagctatgga
     2701 cctctcctgc tcatcagagg ggtccccagg agccacatcc cctttcccag tgagcgccag
     2761 cacccctaag attggggcta tcagttcact tcagggagcc cttggcatgg acttgtctgg
     2821 gattctgcaa gctggcctga tccatcctgt gactggacag attgtcaatg gaagcctcag
     2881 aagagatgat gcagccacga ggaggcggag agggaggcgg aaacatgttg aaggagggat
     2941 ggacctcatc tttttgaagg agcagacact tcaggcggga atcttggaag tccatgaaga
     3001 cccagggcag gccaccttga gcaccacaca ccctgagggg ccagggcctg ccacctcggc
     3061 tcctgagcca gctacggcag ccagcagcca agccgagaaa tccattccca gcaagagtct
     3121 gcttgactgg ctaaggcagc aggctgacta ctccttagaa gttcctggct ttggggcaaa
     3181 tttttcagac aaaccaaagc agaggaggcc acgctgtaaa gaacctggaa aattagatgt
     3241 cagctccctg agcggggaag agagagttcc tgccatcccc aaggagccag gactgagggg
     3301 gtttcttcca gaaaacaagt tcaatcacac tctggctgag cctattcttc gagatacggg
     3361 cccccgcagg agggggaggc ggcctcggag cgaactcctg aaggctcctt ccattgtggc
     3421 agactctccc tctggaatgg ggccactgtt catgaatgga ctgattgctg ggatggacct
     3481 ggtaggactt cagaacatga gaaatatgcc aggcatcccc ctcaccgggc tggtggggtt
     3541 tccagctggc tttgccacga tgccaacagg tgaagaggtc aaaagtaccc tgagcatgct
     3601 gcccatgatg ctgccaggca tggctgctgt gccccagatg tttggtgttg ggggactcct
     3661 cagtccaccc atggcaacca cctgcacttc cactgctccg gcgtctctat caagcacaac
     3721 gaaaagtggt acggcagtga ctgaaaagac tgcggaagac aagccgagta gccatgatgt
     3781 gaaaacagac actttagctg aggacaagcc tggtccaggt ccattttctg atcagtctga
     3841 acctgcaata actactagta gtcctgtggc ttttaaccca tttctcatcc caggagtatc
     3901 tcctggactc atttacccat ccatgttcct ctcccctggt atgggcatgg ctctgccagc
     3961 catgcagcag gccagacact cggaaatagt aggtctggag agccagaaga ggaagaagaa
     4021 gaagacaaag ggggacaacc ccaactccca cccagagcct gctcccagct gtgaaaggga
     4081 gcccagcggt gatgagaact gtgccgaacc cagtgcccct ttgcccgcag agagagaaca
     4141 tggggcacag gctggggagg gggcactcaa agactccaac aacgacacca attagaactt
     4201 ttttcattta agaaattatt gtgacttgta agtttcttat cccataaagg tttgttactt
     4261 ccctcacttc acctccataa gaacctgtgt ttccataagt aagattacgt acctgatttc
     4321 ctgtctgaga actatggtaa cagatgttaa tagttgcagg gtctcaccac ttcattagat
     4381 aagtgttgtc tacctagtct aggaggcaca gaattctcat tctgttatcc agttcattcc
     4441 agcaatcata gttaatacag tacttggtga cacgccctac ccccttctct tccaagtttc
     4501 ccactcactt gaggaggaaa aatggcaaaa gaaagctgtc tagggtttta ccattgaagg
     4561 gtggaagaac agagacaaag aggagctctt tttctgtgag ctgggttgca caggaagaat
     4621 gtcacaggga accaaaaagc acagaaaaag gaagtgctgg tgcatatttt tgagttaaaa
     4681 tatttcccta ttttatcatg attactaagt gagtagtata gacagaagta tataactaat
     4741 ggttgaaaat acatatattc atttctttat aaaaaacaaa aaccttaccg gtagtaatat
     4801 aatttccccc ttggtggttt ttcagacacc tgcagcaaga agaaatactg actgactagg
     4861 cattattttc tatacatccc tctcaccagt gaaaagattc ctcttgctgc gagaaagctt
     4921 tacccaccat gagttattgc tgtcgacggg ggtggggcaa ggacccgcgc tccgtagagc
     4981 tacacgctgc ttcacaagca cacggctagc gctctgctct cacctggttc gcttacagat
     5041 ttctctagcc attaatttgc ctctctgtgt ttaaagagca ccaggaccga atggattttc
     5101 acttcaggct ttccttcacc aagaataagg ttctttctgg agcctgcaag aagacagttg
     5161 cccaacactt tgacacttgc tagtaggtcc tttgatcaag agtgtctgag gctgtcaaat
     5221 gtgtgccacc ctttataata cagctatgaa aagttacttc tccattaatt tctccattct
     5281 gtttatatct tacagttgga cccaaattcc aaattatcag ttaatcgaaa ctacattgca
     5341 agtcaacatt attttctctt cttcctcagc ttctccatgt ttaggaactg agaaagaaac
     5401 tgcctaagca gcacttcccc atgtcctttc accttcatgt taacgtccct tctgatggtc
     5461 tcactcttca caggtagttc acactctgag acttgaagta agctcatggt tcagtactct
     5521 gggggcgcag ggctgcgcag gacccttgga aatgttgcaa gtgttactag taccagtttc
     5581 actttttgtt gtcacaattt actgtatttt ttactttttc tgttacagtt ttgctaattt
     5641 atcagaaggt ccaaaagtct gacataacta tttcattttg cattatttat ttatgatgct
     5701 tttttcattg tcttttatac atttgggatt ataaattatg taaatgttaa aatgagcatc
     5761 tcaaagaagt ctgttaaatc atgactgaaa aaaatcaatc agatgtatct tcaaaaagtg
     5821 gagtcccagt tttatgaatc agagatataa accagaaatt ctataactga tcatagaaga
     5881 agaatccagt aattgaacaa atcctattta atgacatcct tgtagcatag atggtctata
     5941 atgctgacca cagatttctt agaaatgctg ctctctctat ttaactaaca ttttgttcag
     6001 ttttgcctcc agtggaagca gaaagggttt tttcagctgt taaatcctaa aaatcaatat
     6061 aatttattta tgtaagaaaa ataactcaat caatatattt ttgaaccttt taagtactaa
     6121 ttttcttttt atcaagtaga aaaaaaaatg tatttgccct aaatccttaa aatacaaatg
     6181 ctataaaaat tcctgtatct tgaaagcctt actgcaaatg agtattatag acatccagca
     6241 gagtctggtt ttctttgttg tcgttgtgtt gttgttgttt tgtatggaaa agctgctttc
     6301 cccgggttcc acttataacc tccggtaggt cacagggttc aatgtggatc tgacttaaaa
     6361 acccaccagc atgctcaatc ccttgttatc cttatggaat ctgtatgtta actctctggg
     6421 tgttcaggct tctatttgac tgctgttgtg accctgtttg caaaatgaat atgacactct
     6481 gtggattatt tgctctgtaa ggcacaagtg cttcttatga ttattttgac gtttccaaga
     6541 gcaaaagcca aatttaaact ctcttcagca aacttgagcc ttttcatcta attccatgtc
     6601 actcacggcc ataactttcc ttgaccattc ttcaccccat gtcttacata ataaattgtg
     6661 gtcttgatcc tggatttaaa aacaaaagaa aaagtttaaa agtca
//
