LOCUS       NM_001394063            3291 bp    mRNA    linear   PRI 17-FEB-2024
DEFINITION  Homo sapiens CFAP20 domain containing (CFAP20DC), transcript
            variant 9, mRNA.
ACCESSION   NM_001394063 XM_006713013
VERSION     NM_001394063.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3291)
  AUTHORS   Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
            Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
            Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
            Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
            Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
            Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
            Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
            Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
            Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
            Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
            Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S., Watanabe,S.,
            Yosida,M., Hotuta,T., Kusano,J., Kanehori,K., Takahashi-Fujii,A.,
            Hara,H., Tanase,T.O., Nomura,Y., Togiya,S., Komai,F., Hara,R.,
            Takeuchi,K., Arita,M., Imose,N., Musashino,K., Yuuki,H., Oshima,A.,
            Sasaki,N., Aotsuka,S., Yoshikawa,Y., Matsunawa,H., Ichihara,T.,
            Shiohata,N., Sano,S., Moriya,S., Momiyama,H., Satoh,N., Takami,S.,
            Terashima,Y., Suzuki,O., Nakagawa,S., Senoh,A., Mizoguchi,H.,
            Goto,Y., Shimizu,F., Wakebe,H., Hishigaki,H., Watanabe,T.,
            Sugiyama,A., Takemoto,M., Kawakami,B., Yamazaki,M., Watanabe,K.,
            Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M.,
            Tashiro,H., Tanigami,A., Fujiwara,T., Ono,T., Yamada,K., Fujii,Y.,
            Ozaki,K., Hirao,M., Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N.,
            Inagaki,H., Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T.,
            Noguchi,S., Itoh,T., Shigeta,K., Senba,T., Matsumura,K.,
            Nakajima,Y., Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T.,
            Oyama,M., Hata,H., Watanabe,M., Komatsu,T., Mizushima-Sugano,J.,
            Satoh,T., Shirai,Y., Takahashi,Y., Nakagawa,K., Okumura,K.,
            Nagase,T., Nomura,N., Kikuchi,H., Masuho,Y., Yamashita,R.,
            Nakai,K., Yada,T., Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
  TITLE     Complete sequencing and characterization of 21,243 full-length
            human cDNAs
  JOURNAL   Nat Genet 36 (1), 40-45 (2004)
   PUBMED   14702039
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104300.2, AC104303.2 and AC119424.2.
            
            On Mar 30, 2021 this sequence version replaced XM_006713013.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR14038192.4943.1,
                                           SRR14038195.111394.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000482387.7/ ENSP00000417122.2
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-415               AC104300.2         144920-145334       c
            416-505             AC104300.2         142474-142563       c
            506-599             AC104300.2         141538-141631       c
            600-672             AC104300.2         134866-134938       c
            673-787             AC104300.2         32957-33071         c
            788-944             AC104300.2         9017-9173           c
            945-1109            AC104303.2         150469-150633       c
            1110-1246           AC104303.2         136097-136233       c
            1247-1409           AC104303.2         135252-135414       c
            1410-1529           AC104303.2         133741-133860       c
            1530-1652           AC104303.2         132490-132612       c
            1653-1987           AC104303.2         129482-129816       c
            1988-2365           AC104303.2         114956-115333       c
            2366-2569           AC104303.2         97610-97813         c
            2570-2631           AC104303.2         72319-72380         c
            2632-2726           AC119424.2         207316-207410       c
            2727-3291           AC119424.2         195555-196119       c
FEATURES             Location/Qualifiers
     source          1..3291
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /map="3p14.2"
     gene            1..3291
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /note="CFAP20 domain containing"
                     /db_xref="GeneID:200844"
                     /db_xref="HGNC:HGNC:24763"
     exon            1..415
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     CDS             395..2839
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /note="isoform 7 is encoded by transcript variant 9;
                     uncharacterized protein C3orf67; protein CFAP20DC"
                     /codon_start=1
                     /product="protein CFAP20DC isoform 7"
                     /protein_id="NP_001380992.1"
                     /db_xref="CCDS:CCDS93302.1"
                     /db_xref="GeneID:200844"
                     /db_xref="HGNC:HGNC:24763"
                     /translation="MFKNEYQGGAFVEIFSAQGKNPGAKWKILGSPSVIWKEFDKEVK
                     SFVFVLEGSSQTNKIQLPKENKQSLGLIQRFLVLQIYVPLGQDFSTELLITDLGNIKR
                     RLYLSTVHKELSSTPLHAKIPLFMIKRKIWCNLCIDLVAFTSEIFKGAVFQSLDGIVV
                     SANCKLRKIFTLKSKPQDTADKDAVYGVPFSTDEPTDIIPRSCQLMTDVPHVTQLLNM
                     TKLRQTEIKFGGHPLRSAESDQFINRGTSITRNSKNQDVCHIAFGSKVLGPPPLSGRR
                     NNMKISSETVRSVGSKNNRSCQPSTVEKCVNGTEMSALLIPESEEQGNKENIHQIKQT
                     VPIHAANLHIMHPHPPQEPSADKNNNRRRLRLKSTSRERTETPSGSSSGNNRIEDKAS
                     TILTTVSQQGAELLNSGTLGPQSPDQSDEWIFPENADHISYLASSRQSLLLGDDSCNP
                     SHLWLEASKESEHDQQAEESQSVPKDIFTFSSRPRSAPHGKTQTMSPEELSFILDLKE
                     DNSVTSRDTQSEDDFYGGDSSEEGNHSIQGSRGPTTGPSELTQLTLESLLGKAAKRTS
                     KEYLRSAYTEAGATESQDSSMEQIDRNNFEMSLLPTTCLSPTGRRCGSCQKTPEPVIK
                     AKDLSAQQVPASLNKTSLKEISGERLSSIPEASEYDWRNYQPSQMSESELQMLASLRW
                     QQNEELEDAGTSHGLSASQVDNCNVSISTSSDDTTTWNSCLPPPVNQGRHYQKEMNPP
                     SPSNPRDWLNMLSPPIVPPSQQPAEQRPDSCESLSVQGEEDLSVEEDEEVLTLLYDPC
                     LNCYFDPQTGKYYELV"
     exon            416..505
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            506..599
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            600..672
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            673..787
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            788..944
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            945..1109
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            1110..1246
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1409
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            1410..1529
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            1530..1652
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            1653..1987
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            1988..2365
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            2366..2569
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            2570..2631
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            2632..2726
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     exon            2727..3291
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3268..3273
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /note="hexamer: AATAAA"
     polyA_site      3291
                     /gene="CFAP20DC"
                     /gene_synonym="C3orf67"
                     /note="major polyA site"
ORIGIN      
        1 gattctgggg tggggcggca gcgggagcgc gcccgctttt cctaggccag cgggcggttg
       61 tctgtggctc cgcgactggg cgccccgtca cgtaggttac acacacaatc actccccagg
      121 gacggcccgg agtccgtcca ggcagctgcg ccctccccag acccgggcac cgcggaggct
      181 ggagccgcaa tggtgctgat ggagggcggg agatggagct gaccaggggc cggaggggct
      241 gagaagagcc tgcccaagtc tgggccaagc acgaagccct ttcccacccg tcgggctcct
      301 gggttcccgc cagccgattt ccagccgtca gggtcacgcc actcgctgga aaccctgaac
      361 tctgtgcccc ccaagccctg ggccccctgc gggaatgttc aaaaatgagt accagggagg
      421 tgcatttgtt gaaattttca gtgctcaagg aaaaaatcct ggagcaaaat ggaagatcct
      481 tggtagtcca tctgtgattt ggaaagagtt tgataaagaa gttaaaagtt ttgtgtttgt
      541 cctggaaggc agcagccaaa caaacaaaat tcagttacca aaggagaata agcaaagcct
      601 tggattgatc cagaggtttc ttgtacttca gatttacgta cccctgggac aagacttctc
      661 cactgaattg ctaattactg atttagggaa catcaaaaga agattatatt tatcaacggt
      721 ccataaggaa ctatcctcca cccctcttca tgcaaaaatt ccactcttca tgatcaaacg
      781 taaaatttgg tgcaatctat gcattgactt agtagcattc accagtgaaa tattcaaggg
      841 ggcagttttc cagtcattgg atggaattgt tgtctcagct aactgtaagc tacggaagat
      901 cttcacctta aaatcaaagc cacaagacac tgctgataag gatgctgtct atggtgttcc
      961 cttttcaaca gatgagccta cagatattat accacgaagc tgtcaactaa tgacagatgt
     1021 tccacatgtc acacagctgc taaacatgac taaacttcgc caaactgaaa taaaattcgg
     1081 aggccatcct ctaagatcag cagaatcaga tcagttcatt aacagaggaa caagtattac
     1141 acggaacagt aaaaatcaag atgtttgtca tatcgcattt ggatccaaag ttcttgggcc
     1201 acctccactc tctggcagaa ggaataacat gaagatatcc agcgagacag tgagatccgt
     1261 tgggtccaaa aataaccgat catgccagcc gtccactgta gagaagtgtg ttaatggtac
     1321 agaaatgtca gccttgctga tacctgagtc tgaggaacaa ggaaataaag aaaatattca
     1381 ccaaataaag cagactgtac ctattcatgc agccaatcta catattatgc atccgcatcc
     1441 ccctcaagaa ccatcagcag ataagaataa taacagaaga agattacggt taaaaagtac
     1501 cagcagagaa aggacagaga cacccagcgg tagctcttca ggaaataata ggattgaaga
     1561 taaagcatca actatcctca ccactgtgtc ccaacaagga gcagagctgt tgaactccgg
     1621 cactctagga ccccagtctc ctgatcaatc agatgagtgg atttttcctg aaaatgctga
     1681 tcacatttca tatctggcat ccagcagaca gtctctactt ctgggtgatg actcctgcaa
     1741 cccatcacac ctgtggctgg aagccagcaa agagagtgaa cacgaccagc aggcagagga
     1801 atcccagagt gttccaaagg acattttcac tttttcatca agaccacgat cagcacctca
     1861 tggaaagact cagactatgt ccccagagga gctctcattt attttggatc taaaagagga
     1921 taacagtgtg acaagcagag acacccaatc agaggatgat ttttacggcg gcgacagcag
     1981 tgaagagggt aaccacagta tccagggttc tcgaggccca acaactggtc cttcagagtt
     2041 aactcagtta acattagaga gcctgctggg gaaggctgca aagcggacaa gtaaggaata
     2101 tctaaggagc gcctacacag aagcaggagc aacagaaagc caggattcct cgatggagca
     2161 aatagataga aataactttg aaatgagttt gttgcctaca acatgccttt ctccaactgg
     2221 aagaaggtgt gggtcctgtc agaaaactcc agagcccgta atcaaagcga aggatctatc
     2281 agcccagcaa gtgccagctt cactaaacaa aacctccctg aaagaaatct caggggaaag
     2341 gctgagctcg atccccgaag catctgaata tgactggcga aactatcagc caagccagat
     2401 gagtgaatcc gagttacaga tgctagcaag cctacggtgg caacaaaatg aagaactgga
     2461 ggatgctggg acctcccatg gcctgagtgc ctcccaggtg gacaactgta atgtcagcat
     2521 aagtaccagc agtgacgaca caaccacctg gaactcctgc ctgccacccc ctgtcaacca
     2581 gggtcgccac tatcagaaag aaatgaaccc accttctcct tctaatcccc gggactggtt
     2641 aaatatgttg agcccaccaa tcgttcctcc cagtcaacag ccggctgagc agcgtccaga
     2701 ttcctgtgaa agtttgagtg ttcaaggtga agaagacctc agtgtggaag aggacgagga
     2761 agtactgact ttgttgtatg acccttgtct gaactgttac tttgaccccc aaacagggaa
     2821 atactatgag ttggtataat gcctccttcc ggggcagaga gcaggcactc ccagctggag
     2881 cagaatagca gttcagggtc gcttaaggag tcaccacaac ttatgtgttg ggtgaccaca
     2941 aaatcaacag taactgagag aaacgaattc attttgtaaa taatgttcaa cgttaagaat
     3001 acctatattc cttttgtaga tgagtatgat tttgaaactg aagaaattaa tacagaggca
     3061 agattttagg agtttgaatt ggttcttgtt tgttctcatt ctacatataa ttttgtttat
     3121 ttcagataat tttatgtaaa caaattaaga gttattcatt caaatttttt gcagtgttaa
     3181 tctgtaaatg atggcttgat gtacagaaaa tgtatttttg cttaaaagat gcctgggtac
     3241 cttttatttt atggcatttg tattaaaaat aaagtatgat ggtaagaaga a
//
