LOCUS       NM_001007530             779 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens CMT1A duplicated region transcript 15 (CDRT15),
            transcript variant 1, mRNA.
ACCESSION   NM_001007530
VERSION     NM_001007530.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Yu,T., Zhang,T., Zhao,L., Li,K., Li,J. and Yu,A.
  TITLE     Bioinformatic analysis the expression and clinical significance of
            CDRT15 in cholangiocarcinoma using TCGA database
  JOURNAL   Medicine (Baltimore) 102 (31), e34602 (2023)
   PUBMED   37543771
  REMARK    GeneRIF: Bioinformatic analysis the expression and clinical
            significance of CDRT15 in cholangiocarcinoma using TCGA database.
REFERENCE   2  (bases 1 to 779)
  AUTHORS   Inoue,K., Dewar,K., Katsanis,N., Reiter,L.T., Lander,E.S.,
            Devon,K.L., Wyman,D.W., Lupski,J.R. and Birren,B.
  TITLE     The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals
            unique genome architectural features and provides insights into the
            recent evolution of new genes
  JOURNAL   Genome Res 11 (6), 1018-1033 (2001)
   PUBMED   11381029
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC071823.1, AC005224.1, BC146859.1, HY197844.1 and AA854007.1.
            
            On Dec 4, 2019 this sequence version replaced NM_001007530.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW183187.1, AA854007.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA1968968,
                                           SAMEA2148093 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000420162.7/ ENSP00000402355.3
            RefSeq Select criteria :: based on manual assertion, longest
                                      protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-76                BC071823.1         4-79
            77-77               AC005224.1         111550-111550
            78-288              BC146859.1         75-285
            289-289             AC005224.1         111762-111762
            290-638             BC146859.1         287-635
            639-674             HY197844.1         105-140             c
            675-779             AA854007.1         13-117              c
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17p12"
     gene            1..779
                     /gene="CDRT15"
                     /note="CMT1A duplicated region transcript 15"
                     /db_xref="GeneID:146822"
                     /db_xref="HGNC:HGNC:14395"
     exon            1..291
                     /gene="CDRT15"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..596
                     /gene="CDRT15"
                     /note="isoform 1 is encoded by transcript variant 1; CMT1A
                     duplicated region transcript 15 protein"
                     /codon_start=1
                     /product="CMT1A duplicated region transcript 15 protein
                     isoform 1"
                     /protein_id="NP_001007531.1"
                     /db_xref="CCDS:CCDS32569.1"
                     /db_xref="GeneID:146822"
                     /db_xref="HGNC:HGNC:14395"
                     /translation="MFSCCFPTSRGCCFRNGGSESLFRRCRRRLIPHPRRLSPVVIRR
                     IQVPQDSLGQALAGQATPEIPLGLQLHTVLVQEIQELIEAQTLAPGPCAEVRALPAPA
                     AEPEPAWEEAPPERALELEGAPAKDQTNEELPEITEVPESIKRRLGRRVPAATPAPRG
                     NLLLQAWMRVHSWASRLFAPNVLPGTGP"
     exon            292..440
                     /gene="CDRT15"
                     /inference="alignment:Splign:2.1.0"
     exon            441..779
                     /gene="CDRT15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acttggtggg agtcgctcaa gagagcaaga tgttctcgtg ttgcttcccc acttcgagag
       61 gttgctgctt caggaatgga gggagtgaga gccttttccg acgatgccga agaaggctca
      121 tccctcaccc cagacgcctg tcgcccgttg taataaggcg catccaggta ccacaggaca
      181 gcctggggca ggccctagca ggccaggcca caccagagat cccattgggg ctgcagctgc
      241 acactgtcct tgtccaggag attcaggagc tcattgaggc acagacactt gctcctggtc
      301 catgtgcaga agtaagagca ctgccagcac cagcggcgga gccagagcca gcatgggaag
      361 aggcccctcc agagagagca ctggagctgg agggagctcc agccaaggac cagaccaacg
      421 aggagctgcc tgaaatcacg gaggtgccgg agagcattaa aagaaggctg ggaagaagag
      481 ttccagcagc tacgcctgct cccagaggca acctcctcct ccaggcatgg atgcgggtcc
      541 acagctgggc atccaggctg tttgccccta atgtgctgcc cgggacaggc ccttaacagg
      601 cgggcagtgg gtgaggggac caggaggtgg ctccaaaggg taaagcaaac aaagctttta
      661 acgacagccg ttgtgcccca ggctctccat gccaccacct gccctaccat ttattaatag
      721 tgttagaatt acaagttgat gaaacgagat tacaataaag tttgatttct gaaacttca
//
