LOCUS       NM_207327               1489 bp    mRNA    linear   PRI 19-SEP-2024
DEFINITION  Homo sapiens cysteine rich DPF motif domain containing 1 (CDPF1),
            mRNA.
ACCESSION   NM_207327
VERSION     NM_207327.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Huttlin,E.L., Bruckner,R.J., Navarrete-Perea,J., Cannon,J.R.,
            Baltier,K., Gebreab,F., Gygi,M.P., Thornock,A., Zarraga,G., Tam,S.,
            Szpyt,J., Gassaway,B.M., Panov,A., Parzen,H., Fu,S., Golbazi,A.,
            Maenpaa,E., Stricker,K., Guha Thakurta,S., Zhang,T., Rad,R.,
            Pan,J., Nusinow,D.P., Paulo,J.A., Schweppe,D.K., Vaites,L.P.,
            Harper,J.W. and Gygi,S.P.
  TITLE     Dual proteome-scale networks reveal cell-specific remodeling of the
            human interactome
  JOURNAL   Cell 184 (11), 3022-3040 (2021)
   PUBMED   33961781
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   3  (bases 1 to 1489)
  AUTHORS   Collins,J.E., Wright,C.L., Edwards,C.A., Davis,M.P., Grinham,J.A.,
            Cole,C.G., Goward,M.E., Aguado,B., Mallya,M., Mokrab,Y.,
            Huckle,E.J., Beare,D.M. and Dunham,I.
  TITLE     A genome annotation-driven approach to cloning the human ORFeome
  JOURNAL   Genome Biol 5 (10), R84 (2004)
   PUBMED   15461802
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC067871.1 and AW085176.1.
            
            On Nov 22, 2018 this sequence version replaced NM_207327.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR3476690.591117.1, BX648331.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000314567.8/ ENSP00000325301.3
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1478              BC067871.1         4-1481
            1479-1489           AW085176.1         11-21               c
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
                     /map="22q13.31"
     gene            1..1489
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /note="cysteine rich DPF motif domain containing 1"
                     /db_xref="GeneID:150383"
                     /db_xref="HGNC:HGNC:33710"
     exon            1..38
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..410
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /note="UPF0595 protein C22orf40"
                     /codon_start=1
                     /product="cysteine-rich DPF motif domain-containing
                     protein 1"
                     /protein_id="NP_997210.3"
                     /db_xref="CCDS:CCDS33670.1"
                     /db_xref="GeneID:150383"
                     /db_xref="HGNC:HGNC:33710"
                     /translation="MASHVECRPLGVFECELCTLTAPYSYVGQKPPNTQSMVLLEESY
                     VMKDPFTSDKDRFLVLGSCCSLCSRLVCVGPECSLFYSKRFCLPCVRENINAFPQEIR
                     QDLEKRKAPSKRTPSQPGSRT"
     exon            39..151
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /inference="alignment:Splign:2.1.0"
     exon            152..263
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /inference="alignment:Splign:2.1.0"
     exon            264..1489
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /inference="alignment:Splign:2.1.0"
     regulatory      962..967
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /note="hexamer: ATTAAA"
     polyA_site      981
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
     regulatory      1463..1468
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /note="hexamer: AATAAA"
     polyA_site      1489
                     /gene="CDPF1"
                     /gene_synonym="C22orf40; CDKN1A"
                     /note="major polyA site"
ORIGIN      
        1 aggcgccttg gacgcggagc cgtgggacga gggcggcgat ggcgtcccat gtagagtgcc
       61 gtcctctggg agtgtttgag tgtgaactct gtaccttgac agctccgtac agctatgtgg
      121 gacagaagcc ccccaacacc cagtcgatgg tcctcctgga ggaaagctat gtcatgaagg
      181 atcccttcac ctccgacaag gacagattcc tggtcctcgg ctcgtgctgc agtttgtgca
      241 gcaggctggt gtgtgtgggc ccggaatgca gtttattcta ctccaagaga ttctgcctcc
      301 cttgtgtccg ggagaacatc aatgcttttc ctcaggaaat tcggcaagac ttggagaaaa
      361 ggaaagctcc atcaaagagg acccccagcc agcccggttc tcggacgtga gtgcaactgg
      421 ggctaggtca tcgggcggca ccctgcacag agctcctggg ccagcctgcg ccagggatgc
      481 tgctgagctg ggagccgcca tgcctggcct tgtttctgga ccactgggag cagcactgca
      541 gcccagggga gctggagtcc agcttggagc agccacaggc ccagggagct gtagcaagag
      601 ggtagtccaa aggcagatgc cagacaagac acagccagga acccggccag gtccccccac
      661 atgcccctca gggcccaggc ctgagtgagt gctgctcaga tgtgactgag agggatgacc
      721 tccttcagca gggcagctcc taagaggctg cgtgcaggtg cgtgtggggg gagatgccac
      781 actgtgtcgg ggccatggtg cactgtaggt ggctgcaatg gtctctctgt aaggaaaatc
      841 actgacagca gctccttctg gacccagtct ggaaggtcta gagggggata gaatttttat
      901 ttcatatcct tatgtggtgc ttggaaaatg tttttaacct tgaccatgta ttatgtttat
      961 aattaaaaac ccaaagaacc agctcatgtt tggaaaagga atcttccact gaaacatttg
     1021 gatacccgac gttctccctg gacacttggc ccggcaatag ttggggtctc ctgggaagct
     1081 gagtgctggc ttctagcctc tccagttccc tcagactctg tcttcagctc gggcccctcc
     1141 gttctgtctc cctcgactcc aagtcaggaa taccgtgggc ttcctgccct caccccacac
     1201 ctcaagacca tcccactgct tgcctgcttg ccccctgcca tctcgcactc agccctgggt
     1261 gcctgtgaag cctggcccca ctgcctgccg ggggttcctg cagcaccccc ctactccagg
     1321 ctccccatct ccctgaagct tccagggtag cagctggtgg gacactgatc tgtgagctct
     1381 ggaatgtctg cttagaattc tgagaggcag gaactgctct gtctttgtaa ctactcaagg
     1441 ccaactgtca catgaaggaa tgaataaaga gtttttactg acttgtgca
//
