LOCUS       XM_011542863            8176 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens cell adhesion associated, oncogene
            regulated (CDON), transcript variant X1, mRNA.
ACCESSION   XM_011542863
VERSION     XM_011542863.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000011.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011542863.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8176
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
     gene            1..8176
                     /gene="CDON"
                     /gene_synonym="CDO; CDON1; HPE11; Ihog; ORCAM"
                     /note="cell adhesion associated, oncogene regulated;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 11 ESTs, 254 long SRA reads, 2
                     Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments, including 12 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:50937"
                     /db_xref="HGNC:HGNC:17104"
                     /db_xref="MIM:608707"
     CDS             192..4055
                     /gene="CDON"
                     /gene_synonym="CDO; CDON1; HPE11; Ihog; ORCAM"
                     /codon_start=1
                     /product="cell adhesion molecule-related/down-regulated by
                     oncogenes isoform X1"
                     /protein_id="XP_011541165.1"
                     /db_xref="GeneID:50937"
                     /db_xref="HGNC:HGNC:17104"
                     /db_xref="MIM:608707"
                     /translation="MHPDLGPLCTLLYVTLTILCSSVSSDLAPYFTSEPLSAVQKLGG
                     PVVLHCSAQPVTTRISWLHNGKTLDGNLEHVKIHQGTLTILSLNSSLLGYYQCLANNS
                     IGAIVSGPATVSVAVLGDFGSSTKHVITAEEKSAGFIGCRVPESNPKAEVRYKIRGKW
                     LEHSTENYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHQLKVEPIGRKLLVSRPSSD
                     DVHILHPTHSQALAVLSRSPVTLECVVSGVPAPQVYWLKDGQDIAPGSNWRRLYSHLA
                     TDSVDPADSGNYSCMAGNKSGDVKYVTYMVNVLEHASISKGLQDQIVSLGATVHFTCD
                     VHGNPAPNCTWFHNAQPIHPSARHLTAGNGLKISGVTVEDVGMYQCVADNGIGFMHST
                     GRLEIENDGGFKPVIITAPVSAKVADGDFVTLSCNASGLPVPVIRWYDSHGLITSHPS
                     QVLRSKSRKSQLSRPEGLNLEPVYFVLSQAGASSLHIQAVTQEHAGKYICEAANEHGT
                     TQAEASLMVVPFETNTKAETVTLPDAAQNDDRSKRDGSETGLLSSFPVKVHPSAVESA
                     PEKNASGISVPDAPIILSPPQTHTPDTYNLVWRAGKDGGLPINAYFVKYRKLDDGVGM
                     LGSWHTVRVPGSENELHLAELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKEKTASSK
                     NTQASSPPVGIPKYPVVSEAANNNFGVVLTDSSRHSGVPEAPDRPTISTASETSVYVT
                     WIPRANGGSPITAFKVEYKRMRTSNWLVAAEDIPPSKLSVEVRSLEPGSTYKFRVIAI
                     NHYGESFRSSASRPYQVVGFPNRFSSRPITGPHIAYTEAVSDTQIMLKWTYIPSSNNN
                     TPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKMQCFNEGGESE
                     FSNVMICETKVKRVPGASEYPVKDLSTPPNSLGSGGNVGPATSPARSSDMLYLIVGCV
                     LGVMVLILMVFIAMCLWKNRQQNTIQKYDPPGYLYQGSDMNGQMVDYTTLSGASQING
                     NVHGGFLTNGGLSSGYSHLHHKVPNAVNGIVNGSLNGGLYSGHSNSLTRTHVDFEHPH
                     HLVNGGGMYTAVPQIDPLECVNCRNCRNNNRCFTKTNSTFSSSPPPVVPVVAPYPQDG
                     LEMKPLSHVKVPVCLTSAVPDCGQLPEESVKDNVEPVPTQRTCCQDIVNDVSSDGSED
                     PAEFSRGQEGMINLRIPDHLQLAKSCVWEGDSCAHSETEINIVSWNALILPPVPEGCA
                     EKTMWSPPGIPLDSPTEVLQQPRET"
ORIGIN      
        1 agtccggact ttattacaag caggactaca gtgatgtgtt ttcagcactg aagtgaactc
       61 cagtgtaagt acagaaagtg gcttctctgc tttccctccg aagcacaagc atatacacgt
      121 tgcagacttg tgaaccaagg actgggtttt gctctggaag cctgtcctga ttgcttctgt
      181 aatctggcgc tatgcatccg gatcttggac ccttatgtac actgctgtat gttactctta
      241 caattctgtg ctcttctgtg agttcagact tggcacctta ttttacttct gagccgctct
      301 ctgctgtcca gaaacttggt ggacctgtag tactgcattg ttctgctcaa cctgtgacca
      361 ctcgtatctc atggctgcat aacggaaaaa cattggatgg aaacctggaa catgttaaga
      421 ttcatcaggg gactctgaca attctttctc tcaactcctc tcttttgggt tactaccagt
      481 gccttgccaa caatagcatc ggtgccattg tgagtggccc tgcgacagta tctgtggcag
      541 ttcttggtga ttttggttca tccacaaagc atgttattac agcagaagaa aaaagtgctg
      601 gtttcattgg ctgcagggta ccggagagta accccaaagc tgaggtgcgc tataaaatcc
      661 ggggaaaatg gctggaacat tccacagaga attacttaat ccttccatca ggaaatcttc
      721 agattttgaa tgtatcctta gaggacaagg gatcatacaa atgtgcagct tataatcctg
      781 tcacacatca attaaaagtt gaacctattg gccgaaagct ccttgtgagt cgtccttctt
      841 cagatgatgt tcacattctt caccccaccc attcacaggc attagctgtt ctttctcgta
      901 gccctgtaac cttggagtgt gtggtgagtg gggtcccggc tcctcaagtg tattggctaa
      961 aggacgggca ggacattgca ccaggaagca actggagaag gttgtattct catcttgcca
     1021 ctgatagcgt tgacccggcg gactccggaa actattcctg catggcggga aacaagtctg
     1081 gagatgtaaa atatgtgact tacatggtta atgtacttga acatgcttcc atttctaaag
     1141 gactacagga tcagatagtg tctctgggtg ccacagtaca ctttacctgc gacgttcatg
     1201 ggaacccagc ccccaactgt acctggtttc acaatgcaca gcctattcat ccttctgcac
     1261 gacatctaac tgcaggaaac ggactgaaaa tcagtggggt tactgtggaa gatgttggga
     1321 tgtatcagtg tgtagcagat aatgggattg gatttatgca ctctactgga agacttgaaa
     1381 ttgaaaatga cggtggattc aagccagtta taattacggc accagtaagt gcaaaggttg
     1441 cagacggaga ctttgttact ctgtcctgca atgccagtgg gctgccggtt ccggtcattc
     1501 gttggtatga cagccatgga ttgataacca gccatccatc tcaagtcctg agatcgaaat
     1561 cccgaaaatc acagttatca agacctgagg gcttgaacct ggagcctgtg tacttcgtcc
     1621 tgtcccaagc tggtgcaagc tctctccata ttcaggctgt gactcaggaa catgcgggga
     1681 aatacatctg cgaagctgca aatgaacatg gtaccacaca ggcagaagca tctctcatgg
     1741 ttgttccttt tgaaacaaat acaaaagcag agacagtcac acttcctgat gctgctcaga
     1801 atgatgacag aagtaagaga gatggttcag aaactgggtt actgagctca tttccggtga
     1861 aggtccatcc cagtgcagtg gaatcagcac cagagaaaaa cgccagcggc atctctgttc
     1921 ctgatgcccc catcatactg agccccccac agacccacac accagacacg tacaacctgg
     1981 tgtggagggc aggcaaggat ggtgggctgc ccatcaatgc ttactttgtg aagtatcgaa
     2041 agctggatga tggggttggc atgctgggaa gctggcacac ggttcgagtc ccaggaagtg
     2101 aaaatgagct ccatttagct gagctggagc catctagtct ttatgaagtc ttgatggtag
     2161 caagaagcgc agcaggtgaa ggccaacctg ccatgcttac cttccgaacc agcaaagaaa
     2221 aaacagcgtc atcaaaaaac acccaggcat cctctccacc cgtgggcatc cctaagtatc
     2281 ccgttgtttc agaggctgca aacaacaatt ttggagtggt acttacagat tcctctaggc
     2341 acagtggagt tccagaggca ccagatcggc ctaccatctc cactgcatca gagacatcag
     2401 tctatgtcac ttggattcct cgggcaaacg ggggttctcc aatcactgcc ttcaaagtcg
     2461 aatataaacg gatgaggacc agcaattggc tggtggcagc tgaagacatc cctccttcca
     2521 aactttcagt ggaagttcgt agtttagaac caggttcaac atacaaattt agggtcattg
     2581 ccatcaacca ttatggtgag agttttcgga gttcagcatc tcgtccttat caagtggttg
     2641 ggttccccaa tcgcttttcc agccgtccaa taactggacc tcacattgca tacacagagg
     2701 ctgtcagcga tactcagatc atgctaaagt ggacgtacat tccatcaagt aacaataaca
     2761 ctcccattca aggattttat atctattacc gaccaacaga tagtgacaat gacagtgatt
     2821 acaagaggga tgttgtagaa ggttcaaagc agtggcacat gattggccac ctgcagccag
     2881 aaacctccta tgacattaaa atgcaatgct tcaatgaagg aggagaaagt gaatttagca
     2941 atgtgatgat ctgcgagact aaagtgaaac gtgttcctgg agcttctgaa tatcctgtca
     3001 aagacttgag tacccctcca aattctttgg gaagtggagg aaatgtgggg cctgcaacca
     3061 gccctgccag aagcagtgac atgttatatc tgatcgttgg ctgtgtgctg ggcgtcatgg
     3121 tcctcattct gatggttttc attgcaatgt gcctgtggaa gaatcgccag cagaatacca
     3181 tacaaaaata tgacccacca ggatatctct accaaggatc agatatgaac gggcagatgg
     3241 tggactacac cactctctca ggagcaagtc agataaatgg aaatgttcac ggaggcttcc
     3301 taaccaatgg cggtctcagc agtggctatt cccaccttca ccataaggtc cccaatgcag
     3361 tcaatggaat tgtgaatggg agcctaaatg gagggcttta ctccgggcac agcaactctc
     3421 taaccaggac acacgtggat tttgaacatc ctcatcatct agtgaatggt ggtggaatgt
     3481 acacggccgt gcctcagatt gaccctctgg agtgtgttaa ctgccgaaat tgtcgaaaca
     3541 acaataggtg tttcaccaaa accaacagca ctttcagcag cagccctcct cctgtggtcc
     3601 ctgtggtagc accttatcct caggatggtt tggaaatgaa gcccctcagt cacgtgaagg
     3661 tgcctgtatg cctgacttcc gcagtccctg attgtggcca gttgccggag gagagcgtca
     3721 aggacaatgt ggaaccagtc cctactcagc gtacctgctg tcaggacatt gtaaatgacg
     3781 tcagctctga tggctcagaa gatccagcag agttcagcag aggtcaggaa ggcatgatca
     3841 accttaggat tccagatcat cttcagttag ctaagagctg tgtatgggaa ggagacagct
     3901 gtgcccattc agaaacagag atcaacattg taagttggaa tgctcttatt ttgccacctg
     3961 tccccgaggg ctgtgctgag aagacaatgt ggtctccacc tggcattcct ttagacagcc
     4021 cgacagaggt ccttcagcag ccccgggaaa cctgaggaca tgcaaacaac cagtcatgtt
     4081 ccaacttcaa gccggtaact gcacacaaca ggcctgggag cgaactgtgt gaaggacctt
     4141 aattcaaatc agagaaaatc attatttatt tttttgtagt agtaatgtca tatgaatgta
     4201 tcttaaaacg tgtgcccttt tatattattt atgccttaaa tgttttcttc cccattcctt
     4261 cctccccctc ggtaggaaac aaccttgttt tgcatagtat tcagtcacct ggagggcaga
     4321 ggggtccttc catgttttct aacagctata gtgacagcaa gagctcctca tgcaaaggat
     4381 cccatctctt ggctgcttcg gctaggaggg aatgcagggg cccgttgaag gttgccacca
     4441 gctgggtttt caggtggaaa atggtctttc aatagtgtat tctcagactt ttttttgttt
     4501 gttttttgag atggagtctt gctgtcatcc aggctggagt gcaatggctc gatcttggct
     4561 cactgcaacc tccgcctccc aggttcaagc aattctcccg cctcagcctc ctgagtagct
     4621 gggactacag gcacctgcca ccacgtccag ctaattgtct tgtattttta ttagagacaa
     4681 ggtttcaggc tggttttgaa ctcctgacct caagtgatcc acccgcctcc gcctcccaaa
     4741 gtgcgaggat tacaggcgtg agccaccacg tctggcctgt attatcagac ttcctgagaa
     4801 cactttgaaa tcaactgcag ttgtgaccca tgtttataat aacagacctg gctgacggat
     4861 tttacaagag tgccttccac agaagtggta atgtgacctg ttgactttgt atctgcacgt
     4921 gggcacgagt gatgttcagt ttgctaggca ctagtcatag tgttatggac gtggtggagt
     4981 gtaaggtctt gatgaattac ggcagtatgc agaaaaggaa ccaaggccag agagacaaat
     5041 aatgcctcat gtcccactgc tttaaaatta cattaattta taaaatggcc actatgggct
     5101 ctttttgact gtttctcgga gtaggaacaa aataagacat taaatggtgg cttgaagaga
     5161 aagatacaca ttttcagaag aaagaaaggg gagggctgca gggagcctgt cttggcggga
     5221 gctctccagt ctgttggatt agcacaggga cacgcttatg gtgccatgac gccgaaacta
     5281 gtcatccccc atctccagca taggcaacgg cctgcagggg tgagtgtcag aaaagactta
     5341 ctttggaaga aaagggtttt tttttgtttg tttgtttttt gttttttttt gtttgtttgt
     5401 tttgggtttt tttcctgaaa tttcctgata cctttttcag aatgtcaccc ttgtaaatag
     5461 gcacctaaag ccaagttggt cagcagagct cctgaccacg gctgcctctg cgtgacaagg
     5521 acatttgcag ctgcctttgg aaggctcttc acattaaaaa acaataatta tgtaagtgtg
     5581 tttcatagct tgagtcaagc tttcaaggat cactgctcct ttgtgcattg tgcatccctt
     5641 tggggaaaga aacagaaaat tattctcttt ctatagagtc aagcaattcc agcagaagtg
     5701 aagaaatgtt agtttcccag aaatcgcagt ggaatagaat acaatactgt gttaaccaac
     5761 tttctgtata aatgcatcag tattccctta catatgtcta tatattttat aatagaactg
     5821 ttagtgaaaa tgtgcttgtt taagctgggt cactatgcaa gagttacttc cagtagaatg
     5881 tagtgaatgt aattccctag tcggatatta gggatgctgt agacccaagt tctacattcc
     5941 agatgtccgt gcctatagta tactggattt attcttcatg ttgcttaaat gcagttagct
     6001 ctggaggggg atagctgcat cccttacttc tgtgactagc aaaggacaaa gtcccagcgc
     6061 acagaatatg aaaacatacc ctgtgttagc caatcaagtt acagcaatgc tgtcacaaag
     6121 ggagttttag aaaactgggg agtcattgtc cgtagacagc cattttgatt taggaaacag
     6181 gtgtattagc atgagcctta ggtcatgaac tgcttttaaa gattgagttt gaatatggga
     6241 tctgtccacg aggaagagaa aatggcttta cctttaggac aatctcattg tggactgctt
     6301 tatttatatt attagtaacg ctgttttaag tgttattctt tttattgtat tttatttata
     6361 aaaaatgcct ttatatattg aaatatataa atatatatat ataaacacac acacacacac
     6421 acacacacac atatatatat atatatataa ttgcctttat atttaggcgg tatgagttct
     6481 ccctaagcgt gagttggctc tgccctgcac aggcacccaa acagtcctac ctaatgtcac
     6541 ttcaccagga aatgagagga catggtacag tgtgggagac agcactaaca cgtgctgaat
     6601 aactactgtg taccaggcac tgtgctcggt gcttgttact gttaactcat ttaaccccca
     6661 caactcatct acaaagttgg cattaaaatc cccaagtcac tcagtgagcc atgggacctg
     6721 aatccgaacc tagtttatct ggagccataa tctgggctcc tcccattttt ccatactgct
     6781 ttccaaaagc attgtggttc actctttgga tggaaccagt cccgttccgt atgctgtgat
     6841 ctatccctgc cgtggaattc ctccgaggct ccaactccgc agccagagaa gctgctctct
     6901 ggcctccgcg ggcagagctc tgcttatgac ttcgtcttcc agaggtccac atttctcccc
     6961 ttgacgcccc ctgtctacca cctccacctg gaaatttgat ctttactgtg ctcagtgatc
     7021 acgaaattgg tcaagcctat tcatgttcct tctcatctag aattctgtgt gattgtttta
     7081 gcataaactg ccccgctccc actgtatcat ttcacgatct ccttttaatg tttttctttc
     7141 agttttgcac tgacagtctg gtgacaggtg ctgccagggt gcaagttaca ttgcaatgtt
     7201 ctaaaccttt tgaagtgttc ttagcaaaag cctttctttc tgggtgtttt tgtcgaatga
     7261 gtctatgaag actcaatgca tccatcttgg gctgatcatg ccacagatct cattccagct
     7321 atagtactgc caagaagtga agtttatcat tgaattttac ctgtgttgct ctcttttaaa
     7381 gtaatgactt tgagatgcat gctttgtatc atattgaaaa gtatgtttta ttttccttaa
     7441 agttgtaata ttgtgtgtga aactgtacat attttaaatg atgtagcttt ggcaggtttt
     7501 atttggttga tatgatttta tattaaaaga gaaggctgct ttcatatagc atagcccctg
     7561 aaggtgggaa tactccctgt ttgtacaacg ctgcttatag tttgtgattg gggtgggcga
     7621 atgtcttcct ctgaaattct ttggaacccc ccacccctgt cctcccctga aactcccctg
     7681 tgcacacccc tctgttctga ctgcagagat caaggccctg aaggagcagg atcttgggca
     7741 agtgttttag gggacgctga gaacatacct gaccctgggg gcgatgtgga ggcaggccca
     7801 cctcctcggg gcaactttgc gtttccttgg agggaaggga ggtgggtagg agaggagctt
     7861 gggaggatga ggaggagcgg tcccgcctca cacattgtct atttttacca ttaaccgagc
     7921 gccacatgtt tatgaacttc aggatagaaa tttagcctcc ttgtgaaaac gttttgtttt
     7981 actgccctaa gaaaatacac atctctaggc ttgtctgacc agaaagccag caaagtcttt
     8041 tgcatcgggt gtggcccttt tgtattttat ttcccatatt taaataagcc ttccttaaac
     8101 cctagcccca gtcctgagag ctttgagggt agccgaaacc ccttatctaa taaagtctaa
     8161 ctctgtgaga accaca
//
