LOCUS       NM_198097               1814 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens CCZ1 homolog B, vacuolar protein trafficking and
            biogenesis associated (CCZ1B), mRNA.
ACCESSION   NM_198097 XM_942265
VERSION     NM_198097.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC079882.6.
            
            On Feb 11, 2020 this sequence version replaced NM_198097.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC108302.1, SRR18074969.1844054.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000316731.13/ ENSP00000314544.8
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-198               AC079882.6         39351-39548         c
            199-296             AC079882.6         37913-38010         c
            297-390             AC079882.6         37728-37821         c
            391-468             AC079882.6         37362-37439         c
            469-516             AC079882.6         36586-36633         c
            517-600             AC079882.6         35554-35637         c
            601-776             AC079882.6         33039-33214         c
            777-858             AC079882.6         28037-28118         c
            859-920             AC079882.6         26249-26310         c
            921-1032            AC079882.6         25225-25336         c
            1033-1066           AC079882.6         19277-19310         c
            1067-1184           AC079882.6         18211-18328         c
            1185-1343           AC079882.6         14638-14796         c
            1344-1471           AC079882.6         14221-14348         c
            1472-1814           AC079882.6         12210-12552         c
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7p22.1"
     gene            1..1814
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /note="CCZ1 homolog B, vacuolar protein trafficking and
                     biogenesis associated"
                     /db_xref="GeneID:221960"
                     /db_xref="HGNC:HGNC:21717"
     exon            1..198
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1527
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /note="H_DJ1163J12.2; CCZ1 vacuolar protein trafficking
                     and biogenesis associated homolog B; CCZ1 vacuolar protein
                     trafficking and biogenesis associated B; CCZ1 homolog,
                     vacuolar protein trafficking and biogenesis associated B"
                     /codon_start=1
                     /product="vacuolar fusion protein CCZ1 homolog B"
                     /protein_id="NP_932765.1"
                     /db_xref="CCDS:CCDS5354.1"
                     /db_xref="GeneID:221960"
                     /db_xref="HGNC:HGNC:21717"
                     /translation="MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENK
                     ILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWM
                     VMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGG
                     VKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLN
                     IVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNL
                     QHYGRFLTGPLNLNDPDAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASVHP
                     TLDFCRRLDSIVGPQLTVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTV
                     HMRKTPSVSLTSVHPDLMKILGDINSDFTRVDEDEEIIVKAMSDYWVVGKKSDRRELY
                     VILNQKNANLIEVNEEVKKLCATQFNNIFFLD"
     exon            199..296
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            297..390
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            391..468
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            469..516
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            517..600
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            601..776
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            777..858
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            859..920
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1032
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1066
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            1067..1184
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            1185..1343
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            1344..1471
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     exon            1472..1814
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1790..1795
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /note="hexamer: AATAAA"
     polyA_site      1814
                     /gene="CCZ1B"
                     /gene_synonym="C7orf28A; C7orf28B; CCZ1; H_NH0577018.2"
                     /note="major polyA site"
ORIGIN      
        1 ggaagtgcgg tgttttagcc ggtggctgct gtctctgggc gggccgtggg aggctcccga
       61 ggtgggggcc ggggcgggat ggctgcagcg gcggccgggg ccgggagcgg gccctgggcg
      121 gcccaggaga agcagttccc gccggcgctg ctgagtttct tcatctacaa cccgcgcttc
      181 gggccgcgcg aaggacagga ggaaaataag attttatttt atcatccaaa tgaggtagaa
      241 aagaatgaga agattagaaa tgtcggattg tgtgaagcta ttgtacagtt tacaaggaca
      301 tttagcccat caaaacctgc aaaatcttta catacacaga agaacagaca gttcttcaat
      361 gaaccagaag aaaatttctg gatggtcatg gttgttcgga atcctataat tgaaaaacag
      421 agtaaagatg gaaaaccagt tattgaatat caagaggagg agttgttgga caaggtttat
      481 agctcggtgc tgcggcagtg ctacagcatg tacaagcttt ttaatggtac atttctgaaa
      541 gccatggaag acggaggcgt caagcttctg aaagaaagat tagagaaatt cttccatcgg
      601 tatttgcaaa cgctacattt gcagtcatgt gacctacttg acatttttgg tggaatcagc
      661 ttcttcccgt tggataaaat gacttatttg aaaatccagt cctttattaa tagaatggag
      721 gaaagcctga atatagtcaa atacactgct tttctctata acgatcagct catctggagt
      781 ggattagaac aagatgacat gagaatttta tacaaatacc ttaccacctc ccttttccca
      841 aggcacatcg aacctgagtt agcaggaagg gattctccaa taagagcaga aatgccagga
      901 aatcttcaac actatggaag atttcttacc ggacccttga acctcaatga tccagatgca
      961 aaatgcagat tccccaaaat ttttgtaaat acagatgaca cttatgaaga gctccattta
     1021 atcgtttata aggccatgag tgcggctgtg tgctttatga tcgacgcctc tgtccaccca
     1081 acgttggatt tttgccgaag actggacagc atcgttgggc cccagctcac agtgctggcc
     1141 tctgacatct gtgaacagtt taacatcaac aagaggatgt ctgggtctga gaaagaaccc
     1201 cagtttaagt ttatctactt caaccacatg aatctcgccg agaagagcac agttcacatg
     1261 aggaaaacgc ccagcgtgtc gctcacttcc gtgcacccgg atttaatgaa gattctcggt
     1321 gacatcaaca gtgactttac cagagtggat gaagatgagg agatcattgt gaaggccatg
     1381 agtgattact gggttgttgg aaagaagtct gatcggcggg agctctatgt tattttgaat
     1441 caaaaaaatg caaacctgat tgaagtaaat gaagaggtca agaaactttg tgcaacgcag
     1501 ttcaacaaca tcttcttctt ggattgacgg atgacggctc accgagagca tatctaaaaa
     1561 acactctgca aacatttggt cacatgcaag ttagtggtca tatgacggac tgcattcagg
     1621 acaagggtaa agcaatactt gctttgaaga atcagatttc gactcggtct gctgatctga
     1681 ggtttttaga ttttaaatat ttatgtggaa ttaattaaag gtagttggct atatcgctat
     1741 catttcattc ttttgacatt atttgaatat tttactggaa aataagacta ataaattgtt
     1801 aaaagttttt aaaa
//
