LOCUS       NM_207380               5299 bp    mRNA    linear   PRI 16-FEB-2024
DEFINITION  Homo sapiens coiled-coil domain containing 9B (CCDC9B), mRNA.
ACCESSION   NM_207380
VERSION     NM_207380.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5299)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC013356.8.
            
            On Jan 28, 2021 this sequence version replaced NM_207380.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR14038194.1006350.1,
                                           SRR14038195.1163567.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1968189
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000397536.7/ ENSP00000380670.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-132               AC013356.8         26532-26663         c
            133-243             AC013356.8         25629-25739         c
            244-351             AC013356.8         25236-25343         c
            352-507             AC013356.8         24472-24627         c
            508-633             AC013356.8         24259-24384         c
            634-803             AC013356.8         23448-23617         c
            804-862             AC013356.8         23112-23170         c
            863-916             AC013356.8         22484-22537         c
            917-1007            AC013356.8         22298-22388         c
            1008-1050           AC013356.8         21508-21550         c
            1051-5299           AC013356.8         17176-21424         c
FEATURES             Location/Qualifiers
     source          1..5299
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q15.1"
     gene            1..5299
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /note="coiled-coil domain containing 9B"
                     /db_xref="GeneID:388115"
                     /db_xref="HGNC:HGNC:33488"
     exon            1..132
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1593
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /note="uncharacterized protein C15orf52"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 9B"
                     /protein_id="NP_997263.3"
                     /db_xref="CCDS:CCDS10055.3"
                     /db_xref="GeneID:388115"
                     /db_xref="HGNC:HGNC:33488"
                     /translation="MHSAGTPRAESPMSRQEKDAELDRRIVALRKKNQALLRRYQEIQ
                     EDRRQAEQGGMAVTTPALLQPDGLTVTISQVPGEKRVVSRNWARGTCGPRVTNEMLED
                     EDAEDHGGTFCLGELVELAVTMENKAEGKRIVSEKPTRARNQGIEGSPGGRVTRSPPT
                     QVAISSDSARKGSWEPWSRPVGEPPEAGWDYAQWKQEREQIDLARLARHRDAQGDWRR
                     PWDLDKAKSTLQDCSQLRGEGPARAGSRRGPRSHQKLQPPPLLPDGKGRGGQASRPSV
                     APATGSKARGKERLTGRARRWDMKEDKEELEGQEGSQSTRETPSEEEQAQKQSGMEQG
                     RLGSAPAASPALASPEGPKGESVASTASSVPCSPQEPDLAPLDLSLGGAGIPGPRESG
                     CVLGLRPGAQESPVSWPEGSKQQPLGWSNHQAELEVQTCPEPQRGAGLPEPGEDRSGK
                     SGAQQGLAPRSRPTRGGSQRSRGTAGVRRRTGRPGPAGRC"
     exon            133..243
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            244..351
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            352..507
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            508..633
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            634..803
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            804..862
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            863..916
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            917..1007
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            1008..1050
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     exon            1051..5299
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5273..5278
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /note="hexamer: AATAAA"
     polyA_site      5299
                     /gene="CCDC9B"
                     /gene_synonym="C15orf52"
                     /note="major polyA site"
ORIGIN      
        1 gctgagcagc gaagccggca gggagaggcc ggcagaggcc cggctccggt ggctccagct
       61 ttcctcccac tctggctccc caggggctgc tctggaattc tctcggtgcc cgccgttgcc
      121 atgcactcgg ctggaactcc cagagccgag tcccccatga gcaggcagga gaaggacgca
      181 gagctggatc ggaggatagt tgccctgcgc aagaagaacc aggccttgct ccgcaggtac
      241 caggagatcc aggaggaccg tcggcaggca gagcaggggg ggatggctgt gaccacacca
      301 gcactcctcc agcctgatgg cctcaccgtt accatcagcc aggttcccgg tgaaaagcgg
      361 gtggttagca ggaactgggc aaggggtacc tgtggaccca gagtgaccaa cgagatgctt
      421 gaggatgagg atgctgagga ccacgggggt actttctgct taggggagct ggtggagctg
      481 gctgtgacca tggagaacaa agcagagggc aaacggattg taagtgaaaa gcctaccaga
      541 gcaaggaacc aaggcataga ggggtcacct ggagggcgtg tgacccgaag cccccccacg
      601 caggtggcca tcagctcaga ttctgcacgg aagggttctt gggagccctg gagccggccg
      661 gtgggggagc ccccggaggc gggctgggac tatgcccagt ggaagcagga gcgggagcag
      721 atcgacctag cccgcctcgc ccggcacaga gacgcacagg gtgactggcg ccgcccgtgg
      781 gacctggaca aggccaagtc cacgctacag gactgcagcc agctgagggg agaaggcccg
      841 gccagggcag gcagcagaag gggtcccagg agccaccaga aactacagcc cccaccattg
      901 ctccctgatg gaaaaggtcg gggcgggcaa gccagcagac cctcggtggc accagccaca
      961 ggcagcaaag cccggggcaa ggagaggctg actggcaggg cccgaaggtg ggatatgaag
     1021 gaagacaagg aggagctgga aggtcaggag ggaagccaaa gcaccagaga gactcccagt
     1081 gaggaggagc aagcccagaa gcagagcggg atggagcagg gccgactggg gagcgcccct
     1141 gcagccagcc cagccctggc atccccagag gggccgaagg gggagtcagt ggcttccaca
     1201 gccagctcag tcccctgctc tccacaggag cctgacttgg ctcctcttga cctctcccta
     1261 ggaggggctg gcatccctgg gcccagggag agcgggtgtg tgctcggtct gaggcctggg
     1321 gcccaggaga gccctgtgtc ttggccagag ggctctaagc agcagcccct ggggtggagc
     1381 aatcaccagg ctgagctgga agtacagact tgccctgagc cacagagagg agcagggctc
     1441 ccagagcccg gagaagacag gtctggcaag tctggggccc agcagggcct ggccccgaga
     1501 agccggccca cgagaggagg cagccaaagg tcgagaggca cagcaggtgt gaggcgcagg
     1561 acagggcgcc ctggcccggc aggaagatgc tgaacacagc tcctgggagc tggggagtcc
     1621 ccggggagag gaaaagggaa tcactctgtt aaaggccctc cgcgtgatgg ccatgtggtt
     1681 gccggtggct tgcgccattg tcactgagca gtgtggcaaa ctctccagca tggcgacctt
     1741 gtgagggcaa ggagtggcct ccctgcacct cacacgctca tctctgtgca catgtgtgtt
     1801 ttcacgcacg ggcacagccc ctggtgtatt cctgtactag tatctggcat ctgaggctgg
     1861 tgcaccctga cctgggccta ctgctgccca ggccacaagc cttctccact atgatgagag
     1921 aacaaggctt ggtggcaccc agcacctggc tctcctggct ccccgtcacc cccccagggc
     1981 ctggcctccc tctccagctg caggctttca cctcttgcct gggctggatt cccccagtcc
     2041 cagattccca ggatgcccaa ccaggggaat cccagtaacc atgcgccagc ctcctgcctc
     2101 tcctgagtgg tggctgaggc ctggaggagg agaggccaca cagctggcag ggtctggcct
     2161 gggcaaagaa gagtagagct cacgtcttct tggtgaaaag gaggatctct ggaaagtcct
     2221 cctctctgaa atgggttggg atggggagcg acaacctcct cttcccacag caggatggga
     2281 gagcttactc ccaggccccc acacccaggt cagacatcac gtgcaccctg aatgtaggca
     2341 agggcctggc cctgcagccc agggtcattt cctgctcttt ccacttcctc tttccccacc
     2401 gtcctgcact agcaccaggg ccaggccaag gcaagaatca gacagctact ccacagacag
     2461 agaaacaact tccagctaag tatgacatca ggacttgtct ttcctactaa gcctccatcc
     2521 ccgcccctcc cctgaggccc acgtctgctg aattatccgg actccgcaca agctgtggct
     2581 tcctctcagt tcaacaaaca tttcctgagc acccactacc agtaatccag ccggtaggcg
     2641 acggagactg ccagcaggag ggagggaaga aagccagtca tccggcagat ctgggctgtt
     2701 ctgggcggga gctgttctgg gccacaggtg ccctacaggg ctgggggcag gatggcggta
     2761 ggagccccag gggaccctcc cacctctgcc tggcagaagc aagtgccctt ctttcttgtt
     2821 atgtgtgcct tctgctcctg agccctagtg tggacctcac cgcatggtcc cctctgcccc
     2881 ctccttctgg tcctgccatg gctgctgctc tctgctgaag gctgtggggc tctagggaga
     2941 gtccagatca ccctgggatt tctccactgc ccaatgtgaa gcctaaactg tggggtccca
     3001 gctcagcctt cctcactggc tctcaactcc accccacccc tctattcagg aaggtgaggg
     3061 gcatctcttt agcagaccag actgttttga gaagtgtctc tcatacttta actgaagagt
     3121 catgcagatt ctaatggtct ggggagggcc tgagagttcg tctttttttt tttttttttt
     3181 ttttagttag ggtcctgctg ttatcaccta ggctggagtg cagtggcaca atcatggctc
     3241 actgcagcct cgaaccctcc aggctcaggc gatcctctca catcaacctc ttgagtagcc
     3301 gggactacag gtgtgccacc acacctggct aatttttgta ttttttgtag aggcagggtt
     3361 tcaccatgtt gcccaggctg gtctccaact cctgggctca agcaatctgc tcgccttggc
     3421 ctcctaaact gctgggatta caggcatgag ccaccacacc tggccgagaa ttcgtatttc
     3481 taagaggctt caggtgaagc ccatgctggt tcctggacca tggttttgag tagttaaggg
     3541 tttggactag aatatatgaa gggctggggg tgaagacaga ctctagactc taaaggttgg
     3601 tggctggcta tgtaggggat gggggagtgc tacccctgtc aggtggtggg ggcttcctgg
     3661 ctgcagagtt gggtgggaga cttggggaag atgctttgga aggcagtgag tgggtggtgt
     3721 caacttctag tagtgcagtg ggagagctgg tcagggatgg gatggagtga agggggcaga
     3781 ggcatttggt gtggggttga tcagaggaat tttggaaagg cttggaaaca ttcctatgta
     3841 tgtgagacac acctatgcca gggcaaagac tccaagctca agtttttctc ttgccttcta
     3901 gtcacaagaa catggctttg gagtgtgaca ctggcctagg aatccatgac tcccaaagga
     3961 cggggctagg ggtagaggag gttcaggcaa agcccttaga ttttggagac atcaggcaga
     4021 tgtctccaaa aatgattgtg atcaagaatc tgaattataa gattcacagt ctgctcccca
     4081 acccagtgct gccaactgta cagctgcgcc tccacgaagg ggcatatgcc aggctcgtct
     4141 gaccctggaa tgaggatgta ggaagcaggc agagctcggg ttcagccctc acaatgggac
     4201 tgaagcagga gagaaggctg ggcagaaggg ctgtggggaa gtagggcttg tctccatgga
     4261 tgacgtccag aaggatgtca ggaggaggaa tatcacagga gttatagaca ttggagggaa
     4321 cagagactgg cacaggacct cttcattgca ggaagatggt agtgtaggca ggtaacattg
     4381 agctcttttc aaaaaaggag agctcttctt caagataagg aagtggtagt tatggtggta
     4441 acccccggct atcagtccgg atggttgcca cccctcctgc tgtaggatgg aagcagccat
     4501 ggagtgggag ggaggcgcaa taagacaccc ctccacagag cttggcatca tgggaagctg
     4561 gttctacctc ttcctggctc ctttgtttaa aggcctggct gggagccttc cttttgggtg
     4621 tctttctctt ctccaaccaa cagaaaagac tgctcttcaa aggtggaggg tcttcatgaa
     4681 acacagctgc caggagccca ggcacagggc tgggggcctg gaaaaaggag ggcacacagg
     4741 aggagggagg agctggtagg gagatgctgg ctttacctaa ggtctcgaaa caaggagggc
     4801 agaataggca gaggcctctc cgtcccaggc ccatttttga cagatggcgg gacggaaatg
     4861 caatagacca gcctgcaaga aagacatgtg ttttgatgac aggcagtgtg gccgggtgga
     4921 acaagcacag gccttggaat ccaatggact gaatcagaac cctaggcctg ccatctgtca
     4981 gccgggtgac ctgggtcaat tttagcctct aaaagcctca gtctccttat ctgcaaaatg
     5041 aggcttgtga tacctgtttt gaagggttgc tgagaaaatt aaagataagg gtatccaaaa
     5101 tagtctacgg ccataccacc ctgaacgtgc ctaatctcgt aagctaagca gggtcaggcc
     5161 tggttagtac ctggatgggg agagtatgga aaacatacct gcccgcagtt ggagttggac
     5221 tctgtcttaa cagtagcgtg gcacacagaa ggcactcagt aaatacttgt tgaataaatg
     5281 aagtagcgat ttggtgtga
//
