LOCUS       XM_047433604            1838 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens coiled-coil domain containing 78 (CCDC78),
            transcript variant X21, mRNA.
ACCESSION   XM_047433604
VERSION     XM_047433604.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000016.10) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
     gene            1..1838
                     /gene="CCDC78"
                     /gene_synonym="C16orf25; CNM4; hsCCDC78; JFP10"
                     /note="coiled-coil domain containing 78; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:124093"
                     /db_xref="HGNC:HGNC:14153"
                     /db_xref="MIM:614666"
     CDS             330..1742
                     /gene="CCDC78"
                     /gene_synonym="C16orf25; CNM4; hsCCDC78; JFP10"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 78 isoform
                     X19"
                     /protein_id="XP_047289560.1"
                     /db_xref="GeneID:124093"
                     /db_xref="HGNC:HGNC:14153"
                     /db_xref="MIM:614666"
                     /translation="MGDGGCRPRTRALHGHAHAHGICGSQPASECCAPLSVHRVNVHL
                     PQVARGQVHLLMPVVPQILRLESRVLELELRGDGTSQGCAVPVESDPRHPRAAAQELR
                     HKAQVPGHSDDHRFQVQPKNTMNPENEQHRLGSGVSVQPPSSGERAAPETPSLGSHPA
                     SPVCPTAAGGSEVGAGASGGPAAGTGDACVLCSCQGQLRQAEAENARLQLQLKKLKDE
                     YVLRLQHCAWQAVEHADGAGQAPATTALRTFLEATLEDIRAAHRSREQQLARAARSYH
                     KRLVDLSRRHEELLVAYRAPGNPQAIFDIASLDLEPLPVPLVTDFSHREDQHGGPGAL
                     LSSPKKRPGGASQGGTSEPQGLDAASWAQIHQKLRDFSRSTQVGGKGWPRPILTPCPS
                     SWLTSPCQAELERERAQLLVRATMAEEQLSELQEYVDQHLGRYKHEILRLRKLAGAGD
                     PWKVGAVPPAKPQHPRTGSH"
ORIGIN      
        1 aggaagccct cccgacgccc cggctgagcc agtcgtttcc gagttctccg gcccctgatg
       61 gggacgtctg cgcccctctt ctcaggccag aggttgtgct acgagccaag gactggctgc
      121 caggagctcc tgggggcacc gcagtgtggg ccaccagctt ggaagcagag gtcccaccag
      181 atctagcgct caataaggag cagcagctgc agatctccaa ggagctggtc gacattcaga
      241 tcacaaccca ccacctacat gagcagcatg aggctgaaat cttccagctg aagagtgagg
      301 tgagcagccg tgtgaaccag cctcagtgca tgggggacgg ggggtgcagg cccaggacac
      361 gtgccctgca tgggcatgca cacgcacatg gcatctgtgg gtctcagcct gcctctgagt
      421 gctgcgcgcc cctgagcgtg caccgggtga atgttcacct accccaggtg gcccgcgggc
      481 aggtgcacct gctcatgcca gttgtcccac agatccttcg gctggagagc cgggtactgg
      541 agctggagct gcgaggagat ggcaccagcc agggctgtgc agtcccagtg gagtctgacc
      601 ccaggcatcc ccgggcagca gcccaagagc tcagacacaa agcccaggtg cctggacact
      661 ctgatgacca cagattccag gtgcagccca agaacaccat gaaccccgag aatgagcagc
      721 acaggctggg gagcggcgtg agtgtgcagc cacctagctc aggggagagg gcagcaccag
      781 agaccccaag cctagggtct catccagcca gccctgtgtg ccccacagct gcagggggaa
      841 gtgaagtggg cgctggagca tcaggaggcc cggcagcagg cactggtgac gcgtgtgtgc
      901 tgtgcagctg ccaaggccag ctccgtcagg cagaggctga aaatgcccgg ctgcagctgc
      961 agctcaagaa actgaaggat gagtacgtcc tacggctgca acactgcgcc tggcaggcag
     1021 tggagcacgc agatggtgca ggccaagcgc cagccaccac ggccctccgg acattcctgg
     1081 aggcgactct ggaggacatc cgggcagcgc accgcagccg tgagcagcag ctggcccggg
     1141 ctgcccgcag ctaccacaag aggctggtgg atctgagccg caggcatgaa gagctactgg
     1201 ttgcctacag ggcacctggg aacccccaag ctatttttga catagccagc ttggacctgg
     1261 aaccattgcc cgtgcccctg gtcactgact tcagccatcg ggaggaccag cacggcgggc
     1321 ctggggcact gctctcatcc ccaaaaaaga gacccggtgg agcctcccag gggggaacat
     1381 cagagccaca gggcctggac gctgcatcct gggcccagat ccaccagaag ctccgggact
     1441 tctcccgcag cacccaggta ggaggcaagg gctggcccag gcccatcctc acgccatgcc
     1501 ccagctcatg gcttacatcc ccatgccagg cagagctgga acgggagcgg gcacagctgc
     1561 tggtccgggc cacgatggct gaagagcaac tttctgagct acaggagtac gtggaccagc
     1621 acctgggcag gtacaagcac gaaatcctga ggctgaggaa gctggcaggt gcaggggacc
     1681 cctggaaagt gggggctgtg cctccagcca agccccagca tccaaggacc ggcagccact
     1741 aggccgtctc ccaaggagca gagcagagca gagctcctca gccagcacag aaccctccca
     1801 cccagccccc cataaaacat gagtcaggat agaaccca
//
