LOCUS       NM_022903               1791 bp    mRNA    linear   PRI 06-JUN-2024
DEFINITION  Homo sapiens coiled-coil domain containing 71 (CCDC71), mRNA.
ACCESSION   NM_022903
VERSION     NM_022903.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Scott,W.A., Dhanji,E.Z., Dyakov,B.J.A., Dreseris,E.S., Asa,J.S.,
            Grange,L.J., Mirceta,M., Pearson,C.E., Stewart,G.S., Gingras,A.C.
            and Campos,E.I.
  TITLE     ATRX proximal protein associations boast roles beyond histone
            deposition
  JOURNAL   PLoS Genet 17 (11), e1009909 (2021)
   PUBMED   34780483
  REMARK    GeneRIF: ATRX proximal protein associations boast roles beyond
            histone deposition.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DA613715.1, BC035516.1 and AK022862.1.
            
            On Nov 23, 2018 this sequence version replaced NM_022903.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC035516.1, AK022862.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1966682
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000321895.7/ ENSP00000319006.6
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                DA613715.1         27-36
            11-1066             BC035516.1         1-1056
            1067-1621           AK022862.1         1059-1613
            1622-1791           BC035516.1         1612-1781
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /map="3p21.31"
     gene            1..1791
                     /gene="CCDC71"
                     /note="coiled-coil domain containing 71"
                     /db_xref="GeneID:64925"
                     /db_xref="HGNC:HGNC:25760"
     exon            1..65
                     /gene="CCDC71"
                     /inference="alignment:Splign:2.1.0"
     exon            66..1791
                     /gene="CCDC71"
                     /inference="alignment:Splign:2.1.0"
     CDS             118..1521
                     /gene="CCDC71"
                     /note="2600016J21Rik"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 71"
                     /protein_id="NP_075054.3"
                     /db_xref="CCDS:CCDS2790.1"
                     /db_xref="GeneID:64925"
                     /db_xref="HGNC:HGNC:25760"
                     /translation="MSVVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSAT
                     EAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQARAPNPTATSPPASA
                     PRTAMRLPAGRATLLPMPLSGRLAKASTPALAKHATTNLLLSSLKQSSASHARGAAVG
                     FPTHLYPGVYPAMRLSVVLEALVPLKTPMPCLGAKHKAQSLQLSLADSPLKLRKSSGK
                     GPGNPRPKAPRKTTSKGPKCLTRKGPGAGPRRGSGHQSKTNRATGSPSVRRMKGGSAL
                     GTKTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAAQVKAKAKAKAAQVKAKAK
                     VMAAWAKAKAKAKAVRAKAKVARTQPRGRGRPKGSAKARTTRKGQKNRPETVGQKRKR
                     AEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKFRAIKVDRRSSDDEVRQRAQRILRV
                     NLSPVIRLQPLLPYSAV"
     polyA_site      1791
                     /gene="CCDC71"
                     /note="major polyA site"
ORIGIN      
        1 gggcggccat gttggagcag cggaggcggc gcagaggcgc gtcttgggtc cccgcggcgg
       61 cgccggtgcc aagcgctggt ttgcggatac ccaggcagat ctgcagtgcc taatgccatg
      121 agtgtggtgg ttcagcatgt ggaggaaaaa gctgtgcact cctggtcgcg catctccacg
      181 gcagggaaga aggccctgga agaggcactg cttgtcttta acccaatgag ccaggatctc
      241 agtgccacag aggcccagct tgtggccttc ctgcagggcc tgcgagatga tggcttccaa
      301 cctaccatcc tgcgcagtgg tgatgtctat ggctatagtt catgcacagc taatccccca
      361 agccagacga aactgcaagc tcgtgcccct aacccaactg ccacatcacc tccagccagt
      421 gctccccgaa ctgccatgcg gttgcctgca ggtcgggcca cactgcttcc catgccgcta
      481 tctggcagac tggccaaagc atccacacca gcccttgcca agcatgctac caccaacctg
      541 ctgctgagct ctctgaagca atcaagtgcc agccatgccc ggggtgcagc agtgggcttc
      601 cccacccacc tttatccagg tgtctaccct gccatgcggc tctctgttgt ccttgaggcc
      661 ctggttccac ttaagactcc catgccctgc ttgggtgcca agcacaaggc acagtcactg
      721 cagctctcac ttgcagactc tcctctgaaa ctgcggaaaa gttcagggaa gggtccgggg
      781 aaccctcggc ccaaagctcc cagaaaaacc acaagcaagg gccccaagtg tctgactcgc
      841 aaaggccctg gggctggacc ccgacgaggc tctgggcacc agagcaaaac caacagagcc
      901 actgggtccc ccagtgtccg gcgaatgaaa gggggctctg ccctgggcac caaaacagcc
      961 caggccaagg tagctcgaac actggccaaa gctgctcgtg cccaagccaa ggtggctcga
     1021 acacaggcca aggctgctaa ggcccgggcc aaggccaagg cagcacaggt caaggctaag
     1081 gccaaagcta aggcagcaca ggtcaaggcc aaggccaaag tcatggcagc atgggccaag
     1141 gccaaggcta aagccaaggc agtacgggcc aaggccaagg tggctcggac ccagcccagg
     1201 ggcagaggca ggccaaaggg atctgctaag gccagaacta caaggaaggg ccagaaaaac
     1261 cgccctgaga ctgttgggca gaagaggaaa agggctgagg aggcaaaaga tcttcctccc
     1321 aagaagagaa cacggcttgg gccccgatct cctaaggcat ggctagggcc tggaacagca
     1381 aagctgctga agttccgtgc cataaaggta gataggcggt cctcggatga tgaggtgcgg
     1441 cagcgggctc agcggatcct ccgcgtgaac ctgtcacctg taatacggct ccagccattg
     1501 ctgccatatt cagcagtctg attccttcac acggcaatgt ttggggaaac taagcccagc
     1561 tgtctgtgtg gctagtggca cagtgtgcta tgtccgtgga ctccacaatc ttgaggactc
     1621 ccggtgcctc tctagggccc tggtgaccac cagcctcctt tcagaaacca gagtgggtgg
     1681 ggtacggtgg ggtgggtggg cgggaggggt gttttcatgg cgcgatgcac tgtgacttgt
     1741 tattcaagtt gtatgtctac tgttccatct atcacgtttt atacctttcc a
//
