LOCUS       NM_001134848            3493 bp    mRNA    linear   PRI 06-JUN-2024
DEFINITION  Homo sapiens coiled-coil domain containing 152 (CCDC152), mRNA.
ACCESSION   NM_001134848 XM_001714967 XM_001716661 XM_001717416
VERSION     NM_001134848.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3493)
  AUTHORS   Mita,Y., Uchida,R., Yasuhara,S., Kishi,K., Hoshi,T., Matsuo,Y.,
            Yokooji,T., Shirakawa,Y., Toyama,T., Urano,Y., Inada,T., Noguchi,N.
            and Saito,Y.
  TITLE     Identification of a novel endogenous long non-coding RNA that
            inhibits selenoprotein P translation
  JOURNAL   Nucleic Acids Res 49 (12), 6893-6907 (2021)
   PUBMED   34142161
  REMARK    GeneRIF: Identification of a novel endogenous long non-coding RNA
            that inhibits selenoprotein P translation.
REFERENCE   2  (bases 1 to 3493)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   3  (bases 1 to 3493)
  AUTHORS   Lin,S., Luo,W., Jiang,M., Luo,W., Abdalla,B.A., Nie,Q., Zhang,L.
            and Zhang,X.
  TITLE     Chicken CCDC152 shares an NFYB-regulated bidirectional promoter
            with a growth hormone receptor antisense transcript and inhibits
            cells proliferation and migration
  JOURNAL   Oncotarget 8 (48), 84039-84053 (2017)
   PUBMED   29137403
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3493)
  AUTHORS   Castelo,R., Reymond,A., Wyss,C., Camara,F., Parra,G.,
            Antonarakis,S.E., Guigo,R. and Eyras,E.
  TITLE     Comparative gene finding in chicken indicates that we are closing
            in on the set of multi-exonic widely expressed human genes
  JOURNAL   Nucleic Acids Res 33 (6), 1935-1939 (2005)
   PUBMED   15809229
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DB450032.1, AK127368.1, BC039102.1, DB515085.1 and AC008945.6.
            
            On Nov 22, 2018 this sequence version replaced NM_001134848.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1803616.167352.1, BC039102.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1966682
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000361970.10/ ENSP00000354888.5
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                DB450032.1         1-10
            11-728              AK127368.1         1-718
            729-1246            BC039102.1         701-1218
            1247-2970           AK127368.1         1237-2960
            2971-3414           BC039102.1         2943-3386
            3415-3491           DB515085.1         358-434
            3492-3493           AC008945.6         103185-103186       c
FEATURES             Location/Qualifiers
     source          1..3493
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
                     /map="5p12"
     gene            1..3493
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /note="coiled-coil domain containing 152"
                     /db_xref="GeneID:100129792"
                     /db_xref="HGNC:HGNC:34438"
     exon            1..68
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            69..157
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..835
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 152"
                     /protein_id="NP_001128320.1"
                     /db_xref="CCDS:CCDS47203.1"
                     /db_xref="GeneID:100129792"
                     /db_xref="HGNC:HGNC:34438"
                     /translation="MDQSSEGCMKKISSVNLDKLINDFSQIEKKMVETNGKNNILDIQ
                     LEKSNCLLKVMQAKEVSIKEECATLHNIIKGLQQTIEYQQNLKGENEQLKISADLIKE
                     KLKSHEQEYKNNIAKLVSEMKIKEEGYKKEISKLYQDMQRKVELNEEKHKELIEKKEM
                     EISELNAKLRSQEKEKQNEIIKLQLEFDAKLARVQTKSKSYQDSTVLPQSIYRRKLQH
                     FQEEKNKEIAILRNTIRDLEQRLSVGKDSHLKRRRF"
     exon            158..263
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            264..332
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            333..397
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            398..500
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            501..628
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            629..712
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     exon            713..3493
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3101..3106
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /note="hexamer: AATAAA"
     polyA_site      3121
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /note="major polyA site"
     regulatory      3389..3394
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /note="hexamer: ATTACA"
     polyA_site      3408
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
     regulatory      3472..3477
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
                     /note="hexamer: ATTAAA"
     polyA_site      3493
                     /gene="CCDC152"
                     /gene_synonym="CH5400"
ORIGIN      
        1 attcaggggt gtaccaggcc ccagaggcag cggaaaggga gactgtgggg aactaggagc
       61 aacagcaggc atggaccaaa gcagtgaagg atgtatgaaa aagattagca gtgtgaatct
      121 tgacaaactt ataaatgact tctcacagat agaaaagaaa atggtagaaa ccaatggaaa
      181 gaacaatata ctggatattc agttggaaaa aagtaattgc ctattaaaag taatgcaagc
      241 aaaggaggtc tccattaaag aagaatgtgc tactcttcat aatataataa aagggctaca
      301 acagaccatt gaatatcaac agaatttgaa aggtgaaaat gaacaactaa aaataagtgc
      361 tgatcttata aaagagaagt taaagtctca tgaacaggaa tataagaata atattgccaa
      421 acttgtaagt gaaatgaaaa tcaaagagga gggatataag aaagaaataa gcaaacttta
      481 tcaggacatg cagagaaaag ttgaattaaa tgaagaaaag cacaaagaac taatagagaa
      541 aaaggagatg gaaatttcag agttaaatgc aaagctaaga agtcaagaaa aagaaaaaca
      601 aaatgaaata atcaagctac aactagaatt tgatgccaaa ctagcaagag ttcagactaa
      661 atcaaaatca tatcaggatt ctactgtttt gccacaaagt atctacagaa ggaaacttca
      721 gcattttcaa gaagaaaaaa acaaggagat tgcaattctt cgtaatacca ttcgcgattt
      781 agagcaacgc ctttctgttg gcaaagattc tcaccttaag cgtagacggt tttgagctta
      841 gcagtaaatt cattagttgg tatttattta aaagcaatcg aaagtttcac ttctgttttc
      901 aatatatgca tacagcctac ataacaaacg aagtcagctt taaggttttt attgaattta
      961 tttggacaaa tccgtactgt atccaattct gtactgcatt cttgcttaat agtattaacc
     1021 ataaaggagg tcaggtttat agggtttggt ttacctatta aaccatcatt gactatggaa
     1081 atacttacta agcaatatag agacagacaa tattatcttt ccccttatat cttttaagac
     1141 agccactcaa gttttagaag agtatgatac aacattagag aaagaaagat acaaaggctt
     1201 tattcatgtg tgatagtaaa aatcaggatg agtcttagat atacaaaaga taaatggata
     1261 tttaaaatag ttatatatgc ttttttagca aaatattcac gtgttaagta tttctggatc
     1321 ttaaaataca aaatccactt attttattag ttaaaagtag aagattgaaa agacaaagta
     1381 atattgtttt gagagataag taaagaaaaa aatggaaagc atgtctttgt tgttcttcct
     1441 ccattctaaa ctgctaatta tccaacagaa acccctaggt catagtttac gtttctattc
     1501 tcattaaagc aaatagaaca ctggaaaaag aaaaaaaaag acatattaac caaaagctgc
     1561 aatcaccttt cagttgctcc atcataaaaa atatggtttg agtcaatatt tctatgacat
     1621 aaaatttaaa atctggaagc caattcagta gatttctcca tgtttgcaca aatctaattt
     1681 ctatttttgg ttcactaatt tggtagttta taaaaatgct ggaaatgaaa ttgtgtctag
     1741 actaaattgg ggagtatgtc ctattttaaa tatttagttt gaaggtcatt ctcacttttt
     1801 tgcctgattc tttcagcgtc aactggcact ggcttctgtg ggtataagct gctgacttat
     1861 ttgtcaggca gctggaggca aacgtcactg acaagattca gttatgttct cctctgcccg
     1921 aagtccctgt cagctacata aagatgggag gttttcttta cactgtcagg tgattgcaga
     1981 ccctgttttt tcaaatatca gatgtcgaca atggcagcat cagctcctag gagccaactc
     2041 tgaatctgtg ggcaatttac agagtaattg atttatacat ctctttcgac agagcttctt
     2101 ttgtaaatct tgtaaatctt cacttgctgg catatctcgg ttctctgggt gaccctgcct
     2161 atgctgaccc ttgtgcttat ggtggtgatg aaggcctgga ggagcaggat gagtaggagc
     2221 atttggtgct cctggttgct gattctctga aagctcactg ctgccaaggt gctgatgtcc
     2281 atgattgtga tgatgctcat gatggtaatg aggcgatgga gtttcaactg ttttatccac
     2341 agtagccaaa gatacacgtt tacaaaagtc ttcatctttg agagtctgga acaaatttat
     2401 aaatcacttt ttaacaagct tatagagata ggaataatgc gtgaaaaatg atttgtagag
     2461 ctaacatgtg aaattccaac tagttaatta gaatcgagct ggctttgtat tatattaatg
     2521 agaaagagtc tgatgttagt ctcaacacct agacatttta ttaaaggctt aaaaagaaag
     2581 ccaaaccact gtacttatat ttgcagaagc aaatgaagta aactggcaaa aggaacttgg
     2641 attgcaggaa agtcaaagta atatcaaatc ctaaattcag ttgatctggg ccgagcatgg
     2701 tggctcatgc ctgtaatccc accactttgg gtggccgagg ggggcagatt acttgggctc
     2761 aggagtcgga gaccagcctg ggcaacatgg cgagatcctg tctctgcaaa atatacaaaa
     2821 attagctggg tgtggtgtca gatgcctgta gtcccagcta cttgtgaggc tgaggtggga
     2881 ggatcgtttg agcctgcaag atggaggttg cagtgagctc agatggtgcc actgcactcc
     2941 agcctgggtg acagagtcag accctatctc aaaaaaataa aaaataaata aaaaatcagt
     3001 tgaactatat ggaaacttct gtacctgtgt caacggtgca tcttatctaa tactatatga
     3061 tactgtaatc taatattatc tctgataatt caaaaatgct aataaactct gctcaaatgt
     3121 gttagttttt catacttcat cctatgccag gaaatgtttt gaacttcacc aaagctttgc
     3181 taatgtctcc ctaccataag gctgtcagct gaaaatagca aattactgcc cgactcccat
     3241 tgaccataat atccattccg catgatccta gttctttaat ttactggaag tctttactgt
     3301 tttgtggtac ctactaatca gagactcaaa gcctatagat acagaaatgt aacagtaaat
     3361 ctcaacctaa ggctaatttg caaataaaat tacaaaatca acttagaacc caaagactca
     3421 ctaagtgata tgcttttgat gttttgaagg ttttaaaagg ttataaattc cattaaattt
     3481 tagcatacaa cta
//
