LOCUS       NM_001164444             868 bp    mRNA    linear   PRI 12-JUL-2024
DEFINITION  Homo sapiens chibby family member 3 (CBY3), mRNA.
ACCESSION   NM_001164444 XM_928982
VERSION     NM_001164444.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Schmutz,J., Martin,J., Terry,A., Couronne,O., Grimwood,J.,
            Lowry,S., Gordon,L.A., Scott,D., Xie,G., Huang,W., Hellsten,U.,
            Tran-Gyamfi,M., She,X., Prabhakar,S., Aerts,A., Altherr,M.,
            Bajorek,E., Black,S., Branscomb,E., Caoile,C., Challacombe,J.F.,
            Chan,Y.M., Denys,M., Detter,J.C., Escobar,J., Flowers,D.,
            Fotopulos,D., Glavina,T., Gomez,M., Gonzales,E., Goodstein,D.,
            Grigoriev,I., Groza,M., Hammon,N., Hawkins,T., Haydu,L., Israni,S.,
            Jett,J., Kadner,K., Kimball,H., Kobayashi,A., Lopez,F., Lou,Y.,
            Martinez,D., Medina,C., Morgan,J., Nandkeshwar,R., Noonan,J.P.,
            Pitluck,S., Pollard,M., Predki,P., Priest,J., Ramirez,L.,
            Retterer,J., Rodriguez,A., Rogers,S., Salamov,A., Salazar,A.,
            Thayer,N., Tice,H., Tsai,M., Ustaszewska,A., Vo,N., Wheeler,J.,
            Wu,K., Yang,J., Dickson,M., Cheng,J.F., Eichler,E.E., Olsen,A.,
            Pennacchio,L.A., Rokhsar,D.S., Richardson,P., Lucas,S.M.,
            Myers,R.M. and Rubin,E.M.
  TITLE     The DNA sequence and comparative analysis of human chromosome 5
  JOURNAL   Nature 431 (7006), 268-274 (2004)
   PUBMED   15372022
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC136604.2 and BX110582.1.
            
            On Nov 24, 2018 this sequence version replaced NM_001164444.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR279846.6863.1, BX110582.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148874
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000376974.5/ ENSP00000366173.4
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                AC136604.2         1323-1382
            61-394              BX110582.1         1-334
            395-868             AC136604.2         3324-3797
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
                     /map="5q35.3"
     gene            1..868
                     /gene="CBY3"
                     /note="chibby family member 3"
                     /db_xref="GeneID:646019"
                     /db_xref="HGNC:HGNC:33278"
                     /db_xref="MIM:620892"
     exon            1..162
                     /gene="CBY3"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..845
                     /gene="CBY3"
                     /note="chibby homolog 3"
                     /codon_start=1
                     /product="protein chibby homolog 3"
                     /protein_id="NP_001157916.1"
                     /db_xref="CCDS:CCDS47354.1"
                     /db_xref="GeneID:646019"
                     /db_xref="HGNC:HGNC:33278"
                     /db_xref="MIM:620892"
                     /translation="MWASRDHLPEPDLGDAAPPGSPSSFWTSGLPRQERSTSRQRSRG
                     SPSSTCVPYKVHALATFECSATSHASRLWQTLQQFWADHISRPFSPRRPPLRRMPSLS
                     TFYLLDHNTRQAELGLAYGAPCMRLSNQAFVFRGGRWTTESQLARTRSPLLSRTAWGW
                     KAQVQRSKSQVLLEENNYLKLQQELLIDMLTETMARMHLLEKQRNPEVIPTAAARAGQ
                     RKMRKRAGASAGVLMIQPCALDSQ"
     exon            163..868
                     /gene="CBY3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      849..854
                     /regulatory_class="polyA_signal_sequence"
                     /gene="CBY3"
                     /note="hexamer: AATAAA"
     polyA_site      868
                     /gene="CBY3"
                     /note="major polyA site"
ORIGIN      
        1 agccctggga cagcagctca gcaactccac cccatcttcc aggtgaggca caacatacag
       61 tgaggactaa cggggaaaca tcctccgaga agatacaatc tcaagggtgg gcctggatgt
      121 gggcttccag agaccatctc cctgaaccag atcttgggga tgcagcgccc cctggctcgc
      181 cttcatcatt ctggacatcc gggctcccga gacaagagcg cagcacgagt cgccagcgct
      241 cccgaggctc cccttcgagc acctgcgtgc cctacaaggt ccacgccctg gcaaccttcg
      301 agtgctcggc tacgagccat gccagccgcc tgtggcagac gctgcagcag ttttgggccg
      361 atcacatctc gcggcccttc tcgccacggc ggccgccact gcgccgcatg ccctccctgt
      421 ccaccttcta cctgctggac cacaacacgc gccaggccga gctgggcctc gcctacggcg
      481 cgccgtgcat gcgcctcagc aaccaggcct tcgtgttccg cggcgggcgg tggaccactg
      541 agagccagct ggcgaggacg cggtcgccgc tgctctcgcg gaccgcctgg ggctggaagg
      601 cgcaggtgca gcggtccaaa agccaagtgt tgctggagga gaacaactac ctgaagctgc
      661 agcaggaact gctcatagac atgctgactg agaccatggc gcgcatgcac ttgctggaga
      721 agcagcgcaa ccccgaggtg atcccgacgg ctgcggcgcg cgccgggcag aggaagatgc
      781 gcaagcgcgc aggcgccagc gcgggcgtgc tcatgatcca gccgtgcgct ctggactcgc
      841 agtgacgcaa taaaggccgc gctacgca
//
