LOCUS       NM_001355236            1355 bp    mRNA    linear   PRI 08-JUN-2024
DEFINITION  Homo sapiens chromosome 3 open reading frame 49 (C3orf49), mRNA.
ACCESSION   NM_001355236 NM_138808 NR_026866 XR_039937 XR_039938 XR_039939
VERSION     NM_001355236.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Ong,B.A., Li,J., McDonough,J.M., Wei,Z., Kim,C., Chiavacci,R.,
            Mentch,F., Caboot,J.B., Spergel,J., Allen,J.L., Sleiman,P.M. and
            Hakonarson,H.
  TITLE     Gene network analysis in a pediatric cohort identifies novel lung
            function genes
  JOURNAL   PLoS One 8 (9), e72899 (2013)
   PUBMED   24023788
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Fu,G.K., Wang,J.T., Yang,J., Au-Young,J. and Stuve,L.L.
  TITLE     Circular rapid amplification of cDNA ends for high-throughput
            extension cloning of partial genes
  JOURNAL   Genomics 84 (1), 205-210 (2004)
   PUBMED   15203218
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104162.2 and BC015210.1.
            
            On or before Dec 5, 2018 this sequence version replaced
            NM_138808.1, NM_001355236.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC015210.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA2148874,
                                           SAMEA2151119 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000295896.13/ ENSP00000295896.8
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-97                AC104162.2         82071-82167         c
            98-907              BC015210.1         1-810
            908-908             AC104162.2         69736-69736         c
            909-1355            BC015210.1         812-1258
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /map="3p14.2-p14.1"
     gene            1..1355
                     /gene="C3orf49"
                     /note="chromosome 3 open reading frame 49"
                     /db_xref="GeneID:132200"
                     /db_xref="HGNC:HGNC:25190"
     exon            1..298
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
     CDS             174..1052
                     /gene="C3orf49"
                     /codon_start=1
                     /product="putative uncharacterized protein C3orf49"
                     /protein_id="NP_001342165.1"
                     /db_xref="CCDS:CCDS87102.1"
                     /db_xref="GeneID:132200"
                     /db_xref="HGNC:HGNC:25190"
                     /translation="MAQPQLYLPEPFKIAYRKVGQCRRFQQLKKKNGSFKRKGIERWH
                     RAVSTNLLKQNVLVPKEESSSDSDMGFHESQQNQKSNLKTKVKTAFGRMLSYKYRSKP
                     ACASQEGSTDHKEALLSNTQSLLPRIVKEFSSPKLFTAKMRKLSENATIQLDVVEAET
                     EEITQGNTLLRARRTTKRLSVTSLPSGLQKGPYSPKKRPHFPALKKKKRGMENILRKS
                     DLTVGKLQMQVDDLIETVTDKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTM
                     RKYKLKNMTTKGPGDS"
     exon            299..618
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
     exon            619..743
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
     exon            744..857
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
     exon            858..1022
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
     exon            1023..1082
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
     exon            1083..1355
                     /gene="C3orf49"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctaacacc tggaagggaa taagggaaag actctaaaaa tttcctacat attttattcc
       61 gaatagccca caccttgaca gtacattcag tcactggatg attttgtatt gaagtctgta
      121 agttcaagaa ctaaaacaat ccaaaacggc tactacaggt gaagttgaga gcaatggccc
      181 aacctcagct gtatctacca gaacccttta agattgccta cagaaaagtt ggacagtgcc
      241 gaagattcca gcaactcaag aagaaaaatg gctcattcaa aaggaagggg atagaaagat
      301 ggcatagagc tgtgtctacc aacttactaa aacaaaatgt attggtccct aaagaggaat
      361 catccagtga tagtgacatg ggatttcatg aaagccagca aaatcagaaa agtaatttga
      421 agacgaaagt gaagactgct tttgggagga tgctgtccta caagtataga agcaagccag
      481 catgtgccag ccaagagggc tccactgacc ataaagaagc cctcctgtca aacacgcaga
      541 gccttctccc taggattgtc aaggagtttt catctcccaa gttatttaca gcaaaaatga
      601 gaaagctctc agagaatgcg actatacaac ttgatgttgt agaggcagag acagaggaga
      661 taacccaggg aaacacactc cttcgggcca ggagaaccac caagcggtta tctgtgacat
      721 ctcttccttc aggactgcaa aaggggccat attcaccaaa aaagagacca cactttccag
      781 cacttaaaaa aaagaagcgt ggcatggaaa acatccttcg aaaatcagat ttgacagtag
      841 gaaagcttca aatgcaggtg gatgacctca tagaaacagt gactgataaa tccatgaagc
      901 tactggccca aagacatgct gagcttcaac agtgtgagtt tctgggggat gaaattcttc
      961 agtcttctaa acagttccag aggatatcca agagaaccat gaggaagtat aaattaaaaa
     1021 atatgaccac aaaaggacct ggagacagct gacctgagac tccttgagga acacaggaaa
     1081 aggtcttcag acaataactt aaccaattac caatcagaaa atcgactcca cctatgagct
     1141 ggaagtcctt cccacccccc accttcaagc tgtcctgctt ttctgtactg aaccaatata
     1201 catcttacgt gtattcattg atgtctgcct gtaacttctg tccccctaaa atgcataaaa
     1261 tcagctgtaa ttcaaccacc ttcggcacat ctcaggacct cctgatgctg tggcatgtct
     1321 ttaaccttgg caaaataaac tcctaaattg attaa
//
