LOCUS       NM_001008223            2073 bp    mRNA    linear   PRI 01-AUG-2024
DEFINITION  Homo sapiens complement C1q like 4 (C1QL4), mRNA.
ACCESSION   NM_001008223 XM_290558
VERSION     NM_001008223.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Hamoud,N., Tran,V., Aimi,T., Kakegawa,W., Lahaie,S., Thibault,M.P.,
            Pelletier,A., Wong,G.W., Kim,I.S., Kania,A., Yuzaki,M., Bouvier,M.
            and Cote,J.F.
  TITLE     Spatiotemporal regulation of the GPCR activity of BAI3 by C1qL4 and
            Stabilin-2 controls myoblast fusion
  JOURNAL   Nat Commun 9 (1), 4470 (2018)
   PUBMED   30367035
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2073)
  AUTHORS   Wei,Z., Seldin,M.M., Natarajan,N., Djemal,D.C., Peterson,J.M. and
            Wong,G.W.
  TITLE     C1q/tumor necrosis factor-related protein 11 (CTRP11), a novel
            adipose stroma-derived regulator of adipogenesis
  JOURNAL   J Biol Chem 288 (15), 10214-10229 (2013)
   PUBMED   23449976
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF466366.1 and AC125611.4.
            
            On Nov 23, 2018 this sequence version replaced NM_001008223.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF466366.1, BC110812.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2145313
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000334221.5/ ENSP00000335285.3
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2065              AF466366.1         1-2065
            2066-2073           AC125611.4         115157-115164
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12q13.12"
     gene            1..2073
                     /gene="C1QL4"
                     /gene_synonym="C1QTNF11; CTRP11"
                     /note="complement C1q like 4"
                     /db_xref="GeneID:338761"
                     /db_xref="HGNC:HGNC:31416"
                     /db_xref="MIM:615229"
     exon            1..1248
                     /gene="C1QL4"
                     /gene_synonym="C1QTNF11; CTRP11"
                     /inference="alignment:Splign:2.1.0"
     CDS             712..1428
                     /gene="C1QL4"
                     /gene_synonym="C1QTNF11; CTRP11"
                     /note="complement C1q-like protein 4; C1q/TNF-related
                     protein 11; C1q and tumor necrosis factor-related protein
                     11; complement component 1, q subcomponent like 4"
                     /codon_start=1
                     /product="complement C1q-like protein 4 precursor"
                     /protein_id="NP_001008224.1"
                     /db_xref="CCDS:CCDS31793.1"
                     /db_xref="GeneID:338761"
                     /db_xref="HGNC:HGNC:31416"
                     /db_xref="MIM:615229"
                     /translation="MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDG
                     APASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAP
                     AAGYVPRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHV
                     LMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGK
                     VHGGNTNKYSTFSGFIIYPD"
     exon            1249..2073
                     /gene="C1QL4"
                     /gene_synonym="C1QTNF11; CTRP11"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2054..2059
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C1QL4"
                     /gene_synonym="C1QTNF11; CTRP11"
                     /note="hexamer: AATAAA"
     polyA_site      2073
                     /gene="C1QL4"
                     /gene_synonym="C1QTNF11; CTRP11"
                     /note="major polyA site"
ORIGIN      
        1 ataccacccg cgcccgggag ggaggggagg aaggttaggg aggcggagag ggaccgcgcc
       61 cgcaggagag aggcgcgggc cagggctcta gcagggactg gggccgcggc aggggtagca
      121 aggtgagtcg gtgcttgcca agaggcagag cgcaaaacct actaggagat cgcgcccggt
      181 gagcagcacc cgcagctcag agcccgggac gtccggagcg cggggagcag tcccctctcc
      241 atcagggagt ggtctatctg ggcagtctgg gacccaggca ccgcgccatc cctgagagag
      301 cagcagtctg gagagcaggc atctcagatc cctaagaaac cagccgtccg agaagccgcg
      361 gatctcaggt gcccaggatc gttaggactg aacgggaggg tactagagga ccactggctc
      421 tggaccgtcg ggagctgccc ctgacgtaac ccacgagggg cctccccttg acggacggct
      481 tggggagcgg caccgccgcg gctggagccc gcagaggcag ggtaagggga gcggggggca
      541 gccgtcgggg gagtgcagac ccaggcccaa ggcgggtcac cgcctcctgg cccgcggaga
      601 gccccggccc cggcagccat tgcgcccaag agtgaggaag atttgctggc cctggcagcg
      661 tcgcggctga gccgccgcaa gagggtggcg ggcgcggccg tcggagtggc catggtgctg
      721 ctgctgctgg tggccatccc gctgctggtg cacagctccc gcgggccagc gcactacgag
      781 atgctgggtc gctgccgcat ggtgtgcgac ccgcatgggc cccgtggccc tggtcccgac
      841 ggcgcgcctg cttccgtgcc ccccttcccg ccaggcgcca agggagaggt gggccggcgc
      901 gggaaagcag gcctgcgggg gccccctgga ccaccaggtc caagagggcc cccaggagaa
      961 cccggcaggc caggcccccc gggccctccc ggtccaggtc cgggcggggt ggcgcccgct
     1021 gccggctacg tgcctcgcat tgctttctac gcgggcctgc ggcggcccca cgagggttac
     1081 gaggtgctgc gcttcgacga cgtggtgacc aacgtgggca acgcctacga ggcagccagc
     1141 ggcaagttta cttgccccat gccaggcgtc tacttcttcg cttaccacgt gctcatgcgc
     1201 ggcggcgacg gcaccagcat gtgggccgac ctcatgaaga acggacaggt ccgggccagc
     1261 gccattgctc aggacgcgga ccagaactac gactacgcca gcaacagcgt cattctgcac
     1321 ctggacgtgg gcgacgaggt cttcatcaag ctggacggcg ggaaagtgca cggcggcaac
     1381 accaacaagt acagcacctt ctccggcttc atcatctacc ccgactgagc cggccccgcc
     1441 ccgtgccccc gctcgcccct tctctcccgt cctcacccac ctcctgcccg ccccacccga
     1501 ggcgccaccc caccctttga gagcctggcg gtggggtgga cccttccgtt cccggaggcg
     1561 gcctaaatgg gcgaactctt ggtgctcaag ggtataagtg gccgggaaga ggaggagacc
     1621 cggccagagg agcagagcga cttccggagg gatcacccgc acccaagtgc gcgctggacc
     1681 ccataggggc agaggtcgtg gctttctctt ttgtacagag atggggagca gttttaatag
     1741 cgggactcag aggcccagaa agccggaggg aagcccccgc agcttgcgag ggaaataaca
     1801 gaaacaggag gagcccattt aggcaagaga agacattaaa acagggtagt gcaggttctc
     1861 cgtcacaact ttctctcgcc accctctcgt cccctcgtct ccactttcag gctcaggctc
     1921 cagccttggc agccttcctg tgaactggag gaaccagtga attctttcct ggcatttaaa
     1981 acgcattctg tacagtcccc attcccccct atccggacta ggccctgggg ctacagctgc
     2041 tgctgcctct tctaataaag tgaggttggg gga
//
