LOCUS       NM_001101330            1279 bp    mRNA    linear   PRI 05-APR-2024
DEFINITION  Homo sapiens C1GALT1 specific chaperone 1 like (C1GALT1C1L), mRNA.
ACCESSION   NM_001101330 XM_001132518 XM_001133308
VERSION     NM_001101330.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC011242.8.
            
            On Nov 23, 2018 this sequence version replaced NM_001101330.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR5189667.139944.1, DRR138528.9157.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000475092.4/ ENSP00000489061.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1279              AC011242.8         145386-146664
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2p21"
     gene            1..1279
                     /gene="C1GALT1C1L"
                     /note="C1GALT1 specific chaperone 1 like"
                     /db_xref="GeneID:728819"
                     /db_xref="HGNC:HGNC:51617"
     exon            1..1279
                     /gene="C1GALT1C1L"
                     /inference="alignment:Splign:2.1.0"
     CDS             108..1055
                     /gene="C1GALT1C1L"
                     /codon_start=1
                     /product="C1GALT1-specific chaperone 1-like protein"
                     /protein_id="NP_001094800.1"
                     /db_xref="CCDS:CCDS82442.1"
                     /db_xref="GeneID:728819"
                     /db_xref="HGNC:HGNC:51617"
                     /translation="MVSASGTSFFKGMLLGSISWVLITMFGQIHIRHRGQTQDHEHHH
                     LRPPNRNDFLNTSKVILLELSKSIRVFCIIFGESEDESYWAVLKETWTKHCDKAELYD
                     TKNDNLFNIESNDRWVQMRTAYKYVFEKYGDNYNWFFLALPTTFAVIENLKYLLFTRD
                     ASQPFYLGHTVIFGDLEYVTVEGGIVLSRELMKRLNRLLDNSETCADQSVIWKLSEDK
                     QLAICLKYAGVHAENAEDYEGRDVFNTKPIAQLIEEALSNNPQQVVEGCCSDMAITFN
                     GLTPQKMEVMMYGLYRLRAFGHYFNDTLVFLPPVGSEND"
     regulatory      1261..1266
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C1GALT1C1L"
                     /note="hexamer: AATATA"
     polyA_site      1279
                     /gene="C1GALT1C1L"
                     /note="major polyA site"
ORIGIN      
        1 agagtggccc aaccgggagc gcagccgcca gctccggaag gcgcgggacc ccaggacccg
       61 gtcccaggct gcctttgacc ctggcacact gtcctaacgc ctggaaaatg gtttccgcta
      121 gtgggacatc attttttaag ggtatgttgc ttgggagcat ttcctgggtt ttgataacta
      181 tgtttggcca aattcacatt cgacacagag gtcaaactca agaccacgag caccatcacc
      241 ttcgtccacc taacaggaac gatttcttaa acacttcaaa agtgatactc ttggagctca
      301 gtaaaagtat tcgtgttttc tgtatcatct ttggagaatc cgaagatgag agttactggg
      361 ctgtactgaa agagacctgg accaaacact gtgacaaagc agagctctac gatactaaaa
      421 atgataattt gttcaatata gaaagtaatg acaggtgggt acagatgagg accgcttaca
      481 aatacgtctt tgaaaagtat ggtgacaact acaactggtt cttccttgca cttcccacta
      541 cgtttgctgt cattgaaaat ttaaagtacc ttttgtttac aagggatgca tcccagccct
      601 tctatctggg ccacactgtt atatttggag acctcgaata cgtgactgtg gaaggaggga
      661 ttgtcttaag cagagagttg atgaaaagac ttaacagact tctcgataac tctgagacct
      721 gtgcagatca aagtgtgatt tggaagttat ctgaagataa gcagctggca atatgcctga
      781 aatatgcagg agttcatgca gaaaatgcag aggattatga aggaagagat gtatttaata
      841 caaaaccaat cgcacagctt attgaagagg cattgtctaa taaccctcag caagtagtag
      901 aaggctgctg ttcagatatg gctattactt tcaatggact gaccccccaa aagatggaag
      961 taatgatgta tggcctgtac cggctcaggg catttggaca ctatttcaat gacacactcg
     1021 ttttcttgcc tccagttggt tcagaaaatg actgaggcct ggagaataat agacctgtgc
     1081 tgtccaagag cacttgaaat gtggctagtc caaattctga tacagtgtaa gtgtaaaata
     1141 cgtacttcat tcaataattc atatattatt agaaaacagt atgaagatgt aaaacatctc
     1201 agtaatattt catattgact ccacattgaa ataatgtttt ggatattttg cattaaataa
     1261 aatatactat taaaattaa
//
