LOCUS       NM_001080524             972 bp    mRNA    linear   PRI 27-JUN-2021
DEFINITION  Homo sapiens chromosome 16 open reading frame 90 (C16orf90),
            transcript variant 1, mRNA.
ACCESSION   NM_001080524 XM_929133
VERSION     NM_001080524.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC004224.1.
            
            On May 17, 2019 this sequence version replaced NM_001080524.1.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (a).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV111300.1, DR731281.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000437192.8/ ENSP00000401335.3
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-68                AC004224.1         25184-25251
            69-114              AC004224.1         25252-25297
            115-468             AC004224.1         25796-26149
            469-972             AC004224.1         26686-27189
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p13.3"
     gene            1..972
                     /gene="C16orf90"
                     /note="chromosome 16 open reading frame 90"
                     /db_xref="GeneID:646174"
                     /db_xref="HGNC:HGNC:34455"
     exon            1..114
                     /gene="C16orf90"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..617
                     /gene="C16orf90"
                     /note="isoform a is encoded by transcript variant 1;
                     uncharacterized protein C16orf90"
                     /codon_start=1
                     /product="uncharacterized protein C16orf90 isoform a"
                     /protein_id="NP_001073993.1"
                     /db_xref="CCDS:CCDS45397.1"
                     /db_xref="GeneID:646174"
                     /db_xref="HGNC:HGNC:34455"
                     /translation="MEALVCAFSELHIREDAVSQAQGRPGHPDAPPNIYEGGLGSPQP
                     QCPSAQGSKPKNFRLRHLRGLGLYLESHPPPTGQCESHWLGRLMAGGCLPQPEGTAWA
                     LDLPQGTLGPRNSLCSALLEARLPRDSLGSSASSSSMDPDKGALPQPSPSRLRPKRSW
                     GTWEEAMCPLCKRTRSGALERP"
     exon            115..468
                     /gene="C16orf90"
                     /inference="alignment:Splign:2.1.0"
     exon            469..972
                     /gene="C16orf90"
                     /inference="alignment:Splign:2.1.0"
     regulatory      953..958
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C16orf90"
                     /note="hexamer: AATAAA"
     polyA_site      972
                     /gene="C16orf90"
                     /note="major polyA site"
ORIGIN      
        1 aggcagggga gagcagggcc ctgctgcacc caagtcctgg ttgctcctcc ccaccacact
       61 ggccctccat ggaagccttg gtctgtgcat tttctgagct gcacataaga gaagatgcag
      121 tgagccaggc ccaaggacgc cccggccacc ctgacgcacc ccccaacatc tacgaggggg
      181 gcctggggtc cccgcagccg cagtgcccca gtgcccaggg aagcaagccc aagaacttcc
      241 ggctgcgcca cctccggggc ctgggcctct acctggagag ccacccgcca cccactggcc
      301 agtgtgagag ccactggctg ggccggctta tggctggggg ctgcctgcca cagcctgagg
      361 gcacagcctg ggccctggac ctgccacagg ggactctggg cccacgtaac agcctctgtt
      421 cagcccttct ggaagcccga ttgcccaggg acagcctggg aagcagtgct tccagttcca
      481 gcatggaccc agacaagggt gccctccccc agcctagtcc ttctaggctc aggcccaaga
      541 ggtcctgggg gacctgggaa gaggccatgt gtcccttgtg caagagaacc cgctctgggg
      601 ccctggagag gccataggga tcccgagtgc caggactggg tacaggaggg gcaggatggc
      661 cgaggaggca gcctgagcag gaggggctcg gcccccggca gtggccctgc cacatggggt
      721 ggcccaggca gcggcccagc gcccaggcct gggcctcggg agaatgtgat ggggagaggg
      781 aggaggagga ggttccgagg gaggggcaga agcaatagaa gcatggccgt gcccttgcag
      841 cctgcttaga ctccagtcag ccacttgtac ctgggaggcc gggctgagtg cagaatcagg
      901 cccccccgcc accgcctccc tgagaggccg gggagcccac agctctgatc tcaataaaag
      961 ccaaggcctg ca
//
