LOCUS       NM_001080406            1022 bp    mRNA    linear   PRI 15-FEB-2024
DEFINITION  Homo sapiens chromosome 12 open reading frame 71 (C12orf71),
            transcript variant 1, mRNA.
ACCESSION   NM_001080406 XM_001131488
VERSION     NM_001080406.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Venter,J.C., Adams,M.D., Myers,E.W., Li,P.W., Mural,R.J.,
            Sutton,G.G., Smith,H.O., Yandell,M., Evans,C.A., Holt,R.A.,
            Gocayne,J.D., Amanatides,P., Ballew,R.M., Huson,D.H., Wortman,J.R.,
            Zhang,Q., Kodira,C.D., Zheng,X.H., Chen,L., Skupski,M.,
            Subramanian,G., Thomas,P.D., Zhang,J., Gabor Miklos,G.L.,
            Nelson,C., Broder,S., Clark,A.G., Nadeau,J., McKusick,V.A.,
            Zinder,N., Levine,A.J., Roberts,R.J., Simon,M., Slayman,C.,
            Hunkapiller,M., Bolanos,R., Delcher,A., Dew,I., Fasulo,D.,
            Flanigan,M., Florea,L., Halpern,A., Hannenhalli,S., Kravitz,S.,
            Levy,S., Mobarry,C., Reinert,K., Remington,K., Abu-Threideh,J.,
            Beasley,E., Biddick,K., Bonazzi,V., Brandon,R., Cargill,M.,
            Chandramouliswaran,I., Charlab,R., Chaturvedi,K., Deng,Z., Di
            Francesco,V., Dunn,P., Eilbeck,K., Evangelista,C., Gabrielian,A.E.,
            Gan,W., Ge,W., Gong,F., Gu,Z., Guan,P., Heiman,T.J., Higgins,M.E.,
            Ji,R.R., Ke,Z., Ketchum,K.A., Lai,Z., Lei,Y., Li,Z., Li,J.,
            Liang,Y., Lin,X., Lu,F., Merkulov,G.V., Milshina,N., Moore,H.M.,
            Naik,A.K., Narayan,V.A., Neelam,B., Nusskern,D., Rusch,D.B.,
            Salzberg,S., Shao,W., Shue,B., Sun,J., Wang,Z., Wang,A., Wang,X.,
            Wang,J., Wei,M., Wides,R., Xiao,C., Yan,C., Yao,A., Ye,J., Zhan,M.,
            Zhang,W., Zhang,H., Zhao,Q., Zheng,L., Zhong,F., Zhong,W., Zhu,S.,
            Zhao,S., Gilbert,D., Baumhueter,S., Spier,G., Carter,C.,
            Cravchik,A., Woodage,T., Ali,F., An,H., Awe,A., Baldwin,D.,
            Baden,H., Barnstead,M., Barrow,I., Beeson,K., Busam,D., Carver,A.,
            Center,A., Cheng,M.L., Curry,L., Danaher,S., Davenport,L.,
            Desilets,R., Dietz,S., Dodson,K., Doup,L., Ferriera,S., Garg,N.,
            Gluecksmann,A., Hart,B., Haynes,J., Haynes,C., Heiner,C.,
            Hladun,S., Hostin,D., Houck,J., Howland,T., Ibegwam,C., Johnson,J.,
            Kalush,F., Kline,L., Koduru,S., Love,A., Mann,F., May,D.,
            McCawley,S., McIntosh,T., McMullen,I., Moy,M., Moy,L., Murphy,B.,
            Nelson,K., Pfannkoch,C., Pratts,E., Puri,V., Qureshi,H.,
            Reardon,M., Rodriguez,R., Rogers,Y.H., Romblad,D., Ruhfel,B.,
            Scott,R., Sitter,C., Smallwood,M., Stewart,E., Strong,R., Suh,E.,
            Thomas,R., Tint,N.N., Tse,S., Vech,C., Wang,G., Wetter,J.,
            Williams,S., Williams,M., Windsor,S., Winn-Deen,E., Wolfe,K.,
            Zaveri,J., Zaveri,K., Abril,J.F., Guigo,R., Campbell,M.J.,
            Sjolander,K.V., Karlak,B., Kejariwal,A., Mi,H., Lazareva,B.,
            Hatton,T., Narechania,A., Diemer,K., Muruganujan,A., Guo,N.,
            Sato,S., Bafna,V., Istrail,S., Lippert,R., Schwartz,R., Walenz,B.,
            Yooseph,S., Allen,D., Basu,A., Baxendale,J., Blick,L., Caminha,M.,
            Carnes-Stine,J., Caulk,P., Chiang,Y.H., Coyne,M., Dahlke,C.,
            Deslattes Mays,A., Dombroski,M., Donnelly,M., Ely,D., Esparham,S.,
            Fosler,C., Gire,H., Glanowski,S., Glasser,K., Glodek,A.,
            Gorokhov,M., Graham,K., Gropman,B., Harris,M., Heil,J.,
            Henderson,S., Hoover,J., Jennings,D., Jordan,C., Jordan,J.,
            Kasha,J., Kagan,L., Kraft,C., Levitsky,A., Lewis,M., Liu,X.,
            Lopez,J., Ma,D., Majoros,W., McDaniel,J., Murphy,S., Newman,M.,
            Nguyen,T., Nguyen,N., Nodell,M., Pan,S., Peck,J., Peterson,M.,
            Rowe,W., Sanders,R., Scott,J., Simpson,M., Smith,T., Sprague,A.,
            Stockwell,T., Turner,R., Venter,E., Wang,M., Wen,M., Wu,D., Wu,M.,
            Xia,A., Zandieh,A. and Zhu,X.
  TITLE     The sequence of the human genome
  JOURNAL   Science 291 (5507), 1304-1351 (2001)
   PUBMED   11181995
  REMARK    Erratum:[Science 2001 Jun 5;292(5523):1838]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC092747.10.
            
            On Jul 1, 2020 this sequence version replaced NM_001080406.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BG186264.1, BG214350.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000429849.3/ ENSP00000413728.2
            RefSeq Select criteria :: based on manual assertion, longest
                                      protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-611               AC092747.10        93909-94519
            612-1022            AC092747.10        95020-95430
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12p11.23"
     gene            1..1022
                     /gene="C12orf71"
                     /note="chromosome 12 open reading frame 71"
                     /db_xref="GeneID:728858"
                     /db_xref="HGNC:HGNC:34452"
     exon            1..611
                     /gene="C12orf71"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..905
                     /gene="C12orf71"
                     /codon_start=1
                     /product="uncharacterized protein C12orf71"
                     /protein_id="NP_001073875.1"
                     /db_xref="CCDS:CCDS44851.1"
                     /db_xref="GeneID:728858"
                     /db_xref="HGNC:HGNC:34452"
                     /translation="MAYSSSNSDIEDDSSKSNSNLSLSVGYFPCEDTPCEDTTSWEDA
                     PSKGPSIHFLPPVQGAWGTERIGRRMKRQDQIQDEPEQFCKLSIFLAWDVDIGSDNTD
                     SRANRLLNGDNLWIDKLPKERTKLSVGKLNNLVQEFQIFLENLKDDDAVFPETAQQDF
                     QLSSGSPPEMVQMISQATASQRTSAPEISSILSEQPEKDDTPSHTQAQCCLNFGWAFS
                     WLRQRILPSLLRRDHPVNATKSPHRSAPTKRLFHRGKRIQPQETLELGHPI"
     exon            612..1022
                     /gene="C12orf71"
                     /inference="alignment:Splign:2.1.0"
     regulatory      990..995
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C12orf71"
                     /note="hexamer: AATAAA"
     regulatory      999..1004
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C12orf71"
                     /note="hexamer: AATAAA"
     polyA_site      1008
                     /gene="C12orf71"
                     /note="major polyA site"
     polyA_site      1022
                     /gene="C12orf71"
                     /note="major polyA site"
ORIGIN      
        1 agtactatga ctctcttctc cttagtccca cctatttttt cttttttctt ttttgaagct
       61 tctcaagttg agagaaattt gtgcctttga actccatggc atattcatcc tctaacagcg
      121 acatagagga cgacagctcc aaatccaatt ccaacctgag cctctctgtg ggctatttcc
      181 cctgtgagga caccccctgt gaggacacaa cctcctggga agatgcacct tccaagggtc
      241 cttccatcca ctttctgcct cccgtccaag gggcatgggg gactgaaagg atagggagac
      301 gcatgaagag acaagaccaa attcaggatg aaccagagca gttttgcaaa ctaagcatct
      361 tcctggcctg ggacgtggac attggctccg ataacacaga ctcaagagct aataggcttc
      421 taaatggaga caacctgtgg atagacaagt taccaaaaga gagaacaaaa ctgtctgttg
      481 gcaaactgaa taatcttgtg caagagtttc agatatttct agaaaatctg aaagatgatg
      541 acgctgtatt tcctgaaact gctcagcaag atttccagct atccagcggc tcccctccgg
      601 aaatggttca gatgataagc caggcaaccg ccagccaaag gacaagcgct ccagagatct
      661 cctcaatcct gtcagagcag ccagagaagg atgacactcc ttcacacaca caggcccagt
      721 gctgcctgaa ctttgggtgg gccttcagct ggctgaggca gcgtatcctc ccctctctgc
      781 tgaggaggga tcaccctgtg aatgccacca aaagtcccca tcggtcagca ccaacgaaaa
      841 gactctttca cagaggcaag agaattcaac ctcaagaaac ccttgaatta ggacatccca
      901 tatagacaga tttttaaact ttttggaaag tttaaaataa tccataataa ggattccatt
      961 aataatcccc atcagtttgt tttttcctca ataaacaaaa taaatgctct tgttacccca
     1021 ca
//
