LOCUS       NM_001009997            1214 bp    mRNA    linear   PRI 02-APR-2024
DEFINITION  Homo sapiens chromosome 10 open reading frame 62 (C10orf62), mRNA.
ACCESSION   NM_001009997
VERSION     NM_001009997.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Xin,X., Rual,J.F., Hirozane-Kishikawa,T., Hill,D.E., Vidal,M.,
            Boone,C. and Thierry-Mieg,N.
  TITLE     Shifted Transversal Design smart-pooling for high coverage
            interactome mapping
  JOURNAL   Genome Res 19 (7), 1262-1269 (2009)
   PUBMED   19447967
REFERENCE   3  (bases 1 to 1214)
  AUTHORS   Venkatesan,K., Rual,J.F., Vazquez,A., Stelzl,U., Lemmens,I.,
            Hirozane-Kishikawa,T., Hao,T., Zenkner,M., Xin,X., Goh,K.I.,
            Yildirim,M.A., Simonis,N., Heinzmann,K., Gebreab,F., Sahalie,J.M.,
            Cevik,S., Simon,C., de Smet,A.S., Dann,E., Smolyar,A.,
            Vinayagam,A., Yu,H., Szeto,D., Borick,H., Dricot,A., Klitgord,N.,
            Murray,R.R., Lin,C., Lalowski,M., Timm,J., Rau,K., Boone,C.,
            Braun,P., Cusick,M.E., Roth,F.P., Hill,D.E., Tavernier,J.,
            Wanker,E.E., Barabasi,A.L. and Vidal,M.
  TITLE     An empirical framework for binary interactome mapping
  JOURNAL   Nat Methods 6 (1), 83-90 (2009)
   PUBMED   19060904
REFERENCE   4  (bases 1 to 1214)
  AUTHORS   Deloukas,P., Earthrowl,M.E., Grafham,D.V., Rubenfield,M.,
            French,L., Steward,C.A., Sims,S.K., Jones,M.C., Searle,S.,
            Scott,C., Howe,K., Hunt,S.E., Andrews,T.D., Gilbert,J.G.,
            Swarbreck,D., Ashurst,J.L., Taylor,A., Battles,J., Bird,C.P.,
            Ainscough,R., Almeida,J.P., Ashwell,R.I., Ambrose,K.D.,
            Babbage,A.K., Bagguley,C.L., Bailey,J., Banerjee,R., Bates,K.,
            Beasley,H., Bray-Allen,S., Brown,A.J., Brown,J.Y., Burford,D.C.,
            Burrill,W., Burton,J., Cahill,P., Camire,D., Carter,N.P.,
            Chapman,J.C., Clark,S.Y., Clarke,G., Clee,C.M., Clegg,S., Corby,N.,
            Coulson,A., Dhami,P., Dutta,I., Dunn,M., Faulkner,L., Frankish,A.,
            Frankland,J.A., Garner,P., Garnett,J., Gribble,S., Griffiths,C.,
            Grocock,R., Gustafson,E., Hammond,S., Harley,J.L., Hart,E.,
            Heath,P.D., Ho,T.P., Hopkins,B., Horne,J., Howden,P.J., Huckle,E.,
            Hynds,C., Johnson,C., Johnson,D., Kana,A., Kay,M., Kimberley,A.M.,
            Kershaw,J.K., Kokkinaki,M., Laird,G.K., Lawlor,S., Lee,H.M.,
            Leongamornlert,D.A., Laird,G., Lloyd,C., Lloyd,D.M., Loveland,J.,
            Lovell,J., McLaren,S., McLay,K.E., McMurray,A.,
            Mashreghi-Mohammadi,M., Matthews,L., Milne,S., Nickerson,T.,
            Nguyen,M., Overton-Larty,E., Palmer,S.A., Pearce,A.V., Peck,A.I.,
            Pelan,S., Phillimore,B., Porter,K., Rice,C.M., Rogosin,A.,
            Ross,M.T., Sarafidou,T., Sehra,H.K., Shownkeen,R., Skuce,C.D.,
            Smith,M., Standring,L., Sycamore,N., Tester,J., Thorpe,A.,
            Torcasso,W., Tracey,A., Tromans,A., Tsolas,J., Wall,M., Walsh,J.,
            Wang,H., Weinstock,K., West,A.P., Willey,D.L., Whitehead,S.L.,
            Wilming,L., Wray,P.W., Young,L., Chen,Y., Lovering,R.C.,
            Moschonas,N.K., Siebert,R., Fechtel,K., Bentley,D., Durbin,R.,
            Hubbard,T., Doucette-Stamm,L., Beck,S., Smith,D.R. and Rogers,J.
  TITLE     The DNA sequence and comparative analysis of human chromosome 10
  JOURNAL   Nature 429 (6990), 375-381 (2004)
   PUBMED   15164054
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC043281.1 and BC037252.1.
            
            On May 17, 2019 this sequence version replaced NM_001009997.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR5189667.197136.1,
                                        SRR5189667.261032.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000370640.5/ ENSP00000359674.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-640               BC043281.1         480-1119
            641-650             BC037252.1         635-644
            651-1211            BC043281.1         1130-1690
            1212-1214           BC037252.1         1206-1208
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
                     /map="10q24.2"
     gene            1..1214
                     /gene="C10orf62"
                     /gene_synonym="bA548K23.1"
                     /note="chromosome 10 open reading frame 62"
                     /db_xref="GeneID:414157"
                     /db_xref="HGNC:HGNC:23294"
     exon            1..1214
                     /gene="C10orf62"
                     /gene_synonym="bA548K23.1"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..849
                     /gene="C10orf62"
                     /gene_synonym="bA548K23.1"
                     /codon_start=1
                     /product="uncharacterized protein C10orf62"
                     /protein_id="NP_001009997.2"
                     /db_xref="CCDS:CCDS31261.1"
                     /db_xref="GeneID:414157"
                     /db_xref="HGNC:HGNC:23294"
                     /translation="MLWVQRKRRRKETSECPSDKDKSPESHKAKNESWIKSHFSRLSE
                     EKLALDNNASASGNATQTESGSEEVSSTVHIETFTTRHGEVGSALHRESFTSRQKTSG
                     PSVIQEIHQESGKAPSTDEATWAAVAACTKEIDTQGRHLAHSMLQRAIAYQHSGHLES
                     KDINQEELRALEEVEMKLQKNFLTQRENTIAGANHTHTFYGHSHHSHHGHPSHQSHSL
                     PNRRH"
     regulatory      1193..1198
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C10orf62"
                     /gene_synonym="bA548K23.1"
                     /note="hexamer: AATAAA"
     polyA_site      1214
                     /gene="C10orf62"
                     /gene_synonym="bA548K23.1"
                     /note="major polyA site"
ORIGIN      
        1 agacatcctt ggggagcctg ccctttcaag catgaatcat accaccagag atcacccagc
       61 gtgctcttag ctctgcctgc ctggtgtagg gtcctggaga ccttcttgga gctcatccag
      121 cagccatcat gcaaggtggt gctggggact gccctcttgc taggaggtgg aggtctcatg
      181 ctgtgggttc agagaaagag gagaagaaag gaaacctctg agtgtccatc agacaaggac
      241 aagtcaccag aatcccataa agcaaagaat gaaagctgga ttaaatccca ctttagccgc
      301 ctttccgaag agaagctggc cctcgacaac aatgccagcg ctagtggcaa tgctacccag
      361 actgagagtg ggagtgaaga ggtcagctcc acggttcaca tagagacctt caccacgagg
      421 cacggagaag tgggctccgc tctgcaccgg gaatccttca ccagcaggca gaagacatct
      481 gggccctcag tgatccaaga gatccaccag gagtctggaa aagccccatc cactgatgag
      541 gccacgtggg ccgctgtggc tgcctgcacc aaggagattg acacccaggg gcggcacctg
      601 gctcactcca tgctgcagcg ggccatagct taccagcact caggtcacct agagtccaag
      661 gacatcaacc aggaggagct gagggccctc gaggaggtag agatgaagct gcaaaagaat
      721 ttcctcaccc agcgggaaaa caccatagct ggtgccaatc acacacacac cttctatggc
      781 cacagtcacc acagtcacca tggccaccca agccaccaga gccacagcct gcctaatcgc
      841 agacactaga tctgtgactt cttggaagcc acctaaccat ggatggagac gcccctgccc
      901 ccagcaaggc tggctcacac acacgtctgt tttctctcct atggggccat ctatgcaggc
      961 cagggtgaga tgctgtgccc aaatccctac tttcttaggc tcctcacggg gattatgggc
     1021 tctttaaact ccatgagtgg ggtctgccac agaagatggc ccctgttgga gggagagctg
     1081 ggaggacaca gcgcaggtga gatagaccct gaggcccctg aagacccacc aagagaagac
     1141 agatgggagc aggcaagagc cccacactga tgtcattgcc tggaacggag ccaataaagc
     1201 tttgtgtgcc ttca
//
