LOCUS       NM_001080466            1727 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens BTB domain containing 17 (BTBD17), mRNA.
ACCESSION   NM_001080466 XM_371078
VERSION     NM_001080466.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Zody,M.C., Garber,M., Adams,D.J., Sharpe,T., Harrow,J.,
            Lupski,J.R., Nicholson,C., Searle,S.M., Wilming,L., Young,S.K.,
            Abouelleil,A., Allen,N.R., Bi,W., Bloom,T., Borowsky,M.L.,
            Bugalter,B.E., Butler,J., Chang,J.L., Chen,C.K., Cook,A., Corum,B.,
            Cuomo,C.A., de Jong,P.J., DeCaprio,D., Dewar,K., FitzGerald,M.,
            Gilbert,J., Gibson,R., Gnerre,S., Goldstein,S., Grafham,D.V.,
            Grocock,R., Hafez,N., Hagopian,D.S., Hart,E., Norman,C.H.,
            Humphray,S., Jaffe,D.B., Jones,M., Kamal,M., Khodiyar,V.K.,
            LaButti,K., Laird,G., Lehoczky,J., Liu,X., Lokyitsang,T.,
            Loveland,J., Lui,A., Macdonald,P., Major,J.E., Matthews,L.,
            Mauceli,E., McCarroll,S.A., Mihalev,A.H., Mudge,J., Nguyen,C.,
            Nicol,R., O'Leary,S.B., Osoegawa,K., Schwartz,D.C., Shaw-Smith,C.,
            Stankiewicz,P., Steward,C., Swarbreck,D., Venkataraman,V.,
            Whittaker,C.A., Yang,X., Zimmer,A.R., Bradley,A., Hubbard,T.,
            Birren,B.W., Rogers,J., Lander,E.S. and Nusbaum,C.
  TITLE     DNA sequence of human chromosome 17 and analysis of rearrangement
            in the human lineage
  JOURNAL   Nature 440 (7087), 1045-1049 (2006)
   PUBMED   16625196
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC103809.2.
            
            On Jul 12, 2017 this sequence version replaced NM_001080466.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DN831663.1, HY139693.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2157437 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000375366.4/ ENSP00000364515.3
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-134               AC103809.2         8502-8635
            135-411             AC103809.2         10125-10401
            412-1727            AC103809.2         12639-13954
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17q25.1"
     gene            1..1727
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /note="BTB domain containing 17"
                     /db_xref="GeneID:388419"
                     /db_xref="HGNC:HGNC:33758"
     exon            1..134
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..1486
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /note="BTB/POZ domain-containing protein 17; BTB/POZ and
                     BACK domain-containing protein LOC388419; transport and
                     golgi organization 10 homolog A; BTB (POZ) domain
                     containing 17"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein 17 precursor"
                     /protein_id="NP_001073935.1"
                     /db_xref="CCDS:CCDS32719.1"
                     /db_xref="GeneID:388419"
                     /db_xref="HGNC:HGNC:33758"
                     /translation="MPRRGYSKPGSWGSFWAMLTLVGLVTHAAQRADVGGEAAGTSIN
                     HSQAVLQRLQELLRQGNASDVVLRVQAAGTDEVRVFHAHRLLLGLHSELFLELLSNQS
                     EAVLQEPQDCAAVFDKFIRYLYCGELTVLLTQAIPLHRLATKYGVSSLQRGVADYMRA
                     HLAGGAGPAVGWYHYAVGTGDEALRESCLQFLAWNLSAVAASTEWGAVSPELLWQLLQ
                     RSDLVLQDELELFHALEAWLGRARPPPAVAERALRAIRYPMIPPAQLFQLQARSAALA
                     RHGPAVADLLLQAYQFHAASPLHYAKFFDVNGSAFLPRNYLAPAWGAPWVINNPARDD
                     RSTSFQTQLGPSGHDAGRRVTWNVLFSPRWLPVSLRPVYADAAGTALPAARPEDGRPR
                     LVVTPASSGGDAAGVSFQKTVLVGARQQGRLLVRHAYSFHQSSEEAGDFLAHADLQRR
                     NSEYLVENALHLHLIVKPVYHTLIRTPK"
     exon            135..411
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /inference="alignment:Splign:2.1.0"
     exon            412..1727
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1702..1707
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /note="hexamer: AATAAA"
     polyA_site      1727
                     /gene="BTBD17"
                     /gene_synonym="BTBD17A; LGALS3BPL; TANGO10A"
                     /note="major polyA site"
ORIGIN      
        1 ggtctgggct tcaccgtccc tccagtggac ttgggggctg agcataaaga tgcctaggag
       61 aggctactcc aagcctgggt cctggggcag cttctgggcc atgctgacct tggtgggcct
      121 ggtcacccat gcagcacaga gagccgatgt tggcggggag gcagctggca cctccatcaa
      181 ccactcccag gcggtgctcc agcgcttgca ggagctgctg cggcagggca acgccagcga
      241 tgtggttctg cgggtgcagg ctgcgggcac cgatgaggtc cgggtattcc acgcccaccg
      301 cctgctgctg ggactgcaca gtgagctgtt cctggagctg ctaagtaacc agagcgaggc
      361 ggtgctgcag gagccacagg actgcgccgc tgtcttcgac aagttcatca ggtacctgta
      421 ctgcggggag ctgaccgtgc tgctgaccca ggccatcccc ctgcacagac tggccaccaa
      481 gtacggcgtg tcctccctgc agcgcggcgt ggccgactac atgcgcgcgc acctggcggg
      541 aggcgcgggc ccggcggtgg gctggtacca ctacgcggtg ggcaccgggg acgaggccct
      601 gcgcgagagc tgcctgcagt tcctggcctg gaacctgtcg gccgtggcgg ccagcaccga
      661 gtggggcgcc gtgagccccg agctgctctg gcagctcctg caacgctcgg acctggtgct
      721 gcaggatgaa ctggagctgt tccacgcgct ggaggcctgg ctgggtcgcg cgcggccgcc
      781 ccctgccgtg gccgagcggg cgctgcgcgc catacgctac cccatgatcc caccggcaca
      841 gctgttccag ctgcaggcgc gctcggcagc cctggcgcgc cacggccccg cggtggccga
      901 cctcctgctg caggcctacc agttccacgc cgcgtcgccg ctgcactacg ccaagttctt
      961 cgacgtcaac ggcagcgcct tcctgccccg caactacctc gcgcccgcct ggggcgcccc
     1021 gtgggtcatc aacaacccgg cccgcgacga ccgcagcacc agcttccaga cgcagctggg
     1081 cccgagtggc cacgacgcgg gccgccgggt cacctggaac gtgctcttct cgccgcgctg
     1141 gctgcccgtc agcctgcggc ccgtttacgc ggacgccgcg ggcactgctc tgcccgccgc
     1201 gcgcccggag gacggccgac cgcggctggt ggtgacgccg gccagcagcg gcggcgacgc
     1261 ggcgggcgtg agcttccaga agacggtgct ggtgggggcg cgccagcagg gccgcctgct
     1321 ggtccgccac gcctacagct tccaccagag cagcgaggag gccggcgact tcctggcgca
     1381 cgccgacctg cagcggcgca actccgagta cctggttgag aacgccctgc acctgcacct
     1441 catcgtcaag cccgtatacc acacccttat ccggaccccc aagtagcctc ggggtctggg
     1501 aataaaggcc tggcctaggt ggtccctgtg ggtctgggaa gggcaaggcg agcctggagg
     1561 tggcaacaag cctggtcccc tggatggcca ggcgccggcc accctagggc tggggtggag
     1621 tccaggtgag gcgtggtaga caagatgcct ggtttcaaga gctgatttca cagctgactt
     1681 gaaggaacgt tcttggtcct gaataaaccg atgctcagag tggtaaa
//
