LOCUS       XM_047428949            3199 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens bromodomain testis associated (BRDT),
            transcript variant X4, mRNA.
ACCESSION   XM_047428949
VERSION     XM_047428949.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..3199
                     /gene="BRDT"
                     /gene_synonym="BRD6; CT9; SPGF21"
                     /note="bromodomain testis associated; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 18 ESTs, 32 long SRA reads, 10 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:676"
                     /db_xref="HGNC:HGNC:1105"
                     /db_xref="MIM:602144"
     CDS             202..3045
                     /gene="BRDT"
                     /gene_synonym="BRD6; CT9; SPGF21"
                     /codon_start=1
                     /product="bromodomain testis-specific protein isoform X1"
                     /protein_id="XP_047284905.1"
                     /db_xref="GeneID:676"
                     /db_xref="HGNC:HGNC:1105"
                     /db_xref="MIM:602144"
                     /translation="MSLPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLW
                     KHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMF
                     SNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAK
                     EKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTT
                     TPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHC
                     SEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDA
                     YKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTD
                     ITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNK
                     KKEKSKKEKKKEKVNNSNENPRKMCEQMRLKEKSKRNQPKKRKQQFIGLKSEDEDNAK
                     PMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRE
                     LEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTKSDK
                     TQPSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDSP
                     SKENVKKMKNECIPPEGRTGVTQIGYCVQDTTSANTTLVHQTTPSHVMPPNHHQLAFN
                     YQELEHLQTVKNISPLQILPPSGDSEQLSNGITVMHPSGDSDTTMLESECQAPVQKDI
                     KIKNADSWKSLGKPVKPSGVMKSSDELFNQFRKAAIEKEVKARTQELIRKHLEQNTKE
                     LKASQENQRDLGNGLTVESFSNKIQNKCSGEEQKEHQQSSEAQDKSKLWLLKDRDLAR
                     QKEQERRRREAMVGTIDMTLQSDIMTMFENNFD"
ORIGIN      
        1 acaacaaaaa ctggcggcga ggaactgcgg agaactgttg ccctgcaccg cttcattttg
       61 tgcagcctga aaggggcaat cacataaggt cggttttgta atatacaggt aacatacagt
      121 ccgggcagtt gagaaggcca ccccgcttcg tgcctgcagc ccaggacatg tacttgtaga
      181 caggattcaa agcagttaag aatgtctctg ccaagtcgac aaacagctat tattgttaac
      241 cctcctccac cagaatatat aaatactaag aaaaatgggc gattgacaaa tcaacttcag
      301 tatctacaaa aagttgtcct aaaggattta tggaagcata gtttttcatg gccctttcaa
      361 cgtcctgtgg atgctgtgaa actacagttg cctgattatt ataccattat aaaaaaccca
      421 atggatttaa atacaattaa gaagcgcttg gagaataaat attatgcgaa ggcttcagaa
      481 tgtatagaag acttcaatac aatgttctca aattgttatt tatataacaa gcctggagat
      541 gacattgttc ttatggcaca agctctagag aagctgttta tgcagaaatt atctcagatg
      601 ccacaagaag agcaagttgt gggtgttaag gaaagaatca agaaaggcac tcaacagaat
      661 atagctgttt cttctgctaa agaaaaatca tcacccagcg caacagaaaa agtatttaag
      721 cagcaagaaa ttccttctgt atttcctaag acatctattt ctcccttgaa cgtggtacag
      781 ggagcttcag tcaactccag ttcacaaact gcggcccaag ttacaaaagg tgtgaagagg
      841 aaagcagata caacaactcc tgcaacttca gcagttaaag caagtagtga attttctcca
      901 acattcacag aaaaatcagt ggcactgcca cctataaaag aaaatatgcc aaagaatgtt
      961 ttgccagatt ctcagcaaca atataatgtt gtgaagactg ttaaagtaac tgaacaatta
     1021 aggcactgta gtgagattct taaagaaatg cttgcaaaga aacatttttc atatgcatgg
     1081 cccttttata atcctgttga cgttaatgct ttgggactcc ataactacta tgacgttgtc
     1141 aaaaatccga tggatcttgg aactattaag gagaaaatgg ataaccaaga atataaggat
     1201 gcatacaaat ttgcggcaga tgttagatta atgttcatga attgctacaa gtacaatcct
     1261 ccagatcacg aagttgtgac aatggcaaga atgcttcagg atgttttcga aacgcatttt
     1321 tcaaagatcc cgattgaacc tgttgagagt atgcctttat gttacatcaa aacagatatc
     1381 acagaaacca ctggtagaga gaacactaat gaagcctcct ctgaagggaa ctcttctgat
     1441 gattctgaag atgagcgagt taagcgtctt gcaaagcttc aggagcagct taaagctgta
     1501 catcaacagc tccaggtttt gtcccaagta cctttccgta agctaaataa aaagaaagag
     1561 aagtctaaaa aggaaaagaa aaaagaaaag gttaataaca gcaatgaaaa tccaagaaaa
     1621 atgtgtgagc aaatgaggct aaaggaaaag tccaagagaa atcagccaaa gaaaaggaaa
     1681 caacagttca ttggtctaaa atctgaagat gaagataatg ctaaacctat gaactatgat
     1741 gagaaaaggc agttaagtct gaatataaac aaactccctg gagataaact tgggcgagta
     1801 gttcacataa tacaatcaag agagccttct ctgagcaatt ccaatcctga tgagatagag
     1861 atagactttg aaacactgaa agcatcaaca ctaagagaat tagaaaaata tgtttcggca
     1921 tgtctaagaa agagaccatt aaaacctcct gctaagaaaa taatgatgtc caaagaagaa
     1981 cttcactcac agaaaaaaca ggaattggaa aagcggttac tggatgttaa taatcagtta
     2041 aattctagaa aacgtcaaac aaaatctgat aaaacgcaac catccaaagc tgttgaaaat
     2101 gtttcccgac tgagtgagag cagcagcagc agcagcagct catcagagtc tgaaagtagc
     2161 agcagtgact taagctcttc agacagcagt gattctgaat cagaaatgtt ccctaagttt
     2221 acagaagtaa aaccaaatga ttctccttct aaagagaatg taaagaaaat gaagaatgaa
     2281 tgcataccgc ctgaaggaag aacaggcgtc acacagatag gatattgtgt gcaagacaca
     2341 acctctgcca atactaccct tgttcatcag accacacctt cacatgtaat gccaccaaat
     2401 caccaccaat tagcatttaa ttatcaagaa ttagaacatt tacagactgt gaaaaacatt
     2461 tcacctttac aaattctgcc tccctcaggt gattctgaac agctctcaaa tggcataact
     2521 gtgatgcatc catctggtga tagtgacaca acgatgttag aatctgaatg tcaagctcct
     2581 gtacagaagg atataaagat taagaatgca gattcatgga aaagtttagg caaaccagtg
     2641 aaaccatcag gtgtaatgaa atcctcagat gagctcttca accaatttag aaaagcagcc
     2701 atagaaaagg aagtaaaagc tcggacacag gaactcatac ggaagcattt ggaacaaaat
     2761 acaaaggaac taaaagcatc tcaagaaaat cagagggatc ttgggaatgg attgactgta
     2821 gaatcttttt caaataaaat acaaaacaag tgctctggag aagagcagaa agaacatcag
     2881 cagtcatcag aagctcaaga taaatccaaa ctctggcttc tcaaagaccg tgatttagca
     2941 aggcagaaag aacaagagag gaggaggaga gaagcaatgg tgggtaccat tgatatgacc
     3001 cttcaaagtg acattatgac aatgtttgaa aacaactttg attaaaactc agtttttaaa
     3061 ttaaccatca acttaaaatg aatggtaaaa gatcaaaatg catatggtaa aatgattgct
     3121 ttcagataac aagataccaa tcttatattg tattttgact gctctaaaat gattaaacag
     3181 ttttcactta catttttaa
//
