LOCUS       NM_001257964            3324 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens biorientation of chromosomes in cell division 1 like 2
            (BOD1L2), mRNA.
ACCESSION   NM_001257964
VERSION     NM_001257964.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Porter,I.M., McClelland,S.E., Khoudoli,G.A., Hunter,C.J.,
            Andersen,J.S., McAinsh,A.D., Blow,J.J. and Swedlow,J.R.
  TITLE     Bod1, a novel kinetochore protein required for chromosome
            biorientation
  JOURNAL   J Cell Biol 179 (2), 187-197 (2007)
   PUBMED   17938248
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC100775.3.
            
            On Nov 22, 2018 this sequence version replaced NM_001257964.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK127964.1, BC035018.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000585477.2/ ENSP00000467843.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3324              AC100775.3         99056-102379
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="18"
                     /map="18q21.31"
     gene            1..3324
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /note="biorientation of chromosomes in cell division 1
                     like 2"
                     /db_xref="GeneID:284257"
                     /db_xref="HGNC:HGNC:28505"
     exon            1..3324
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /inference="alignment:Splign:2.1.0"
     CDS             227..745
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /note="family with sequence similarity 44, member C;
                     biorientation of chromosomes in cell division 1
                     pseudogene; putative protein FAM44C; putative
                     biorientation of chromosomes in cell division protein 1
                     pseudogene; putative biorientation of chromosomes in cell
                     division protein 1-like 2"
                     /codon_start=1
                     /product="biorientation of chromosomes in cell division
                     protein 1-like 2"
                     /protein_id="NP_001244893.1"
                     /db_xref="CCDS:CCDS59322.1"
                     /db_xref="GeneID:284257"
                     /db_xref="HGNC:HGNC:28505"
                     /translation="MADGGGGGSGGAGPASTRASGGGGPINPASLPPGDPQLIAIIVG
                     QLKSRGLFDSFRRDCKADVDTKPAYQNLSQKADNFVSTHLDKQEWNPPANDNQLHDGL
                     RQSVVQSGRSEAGVDRISSQVVDPKLNHIFRPQIEQIIHEFLVAQKEAAVPALPPEPE
                     GQDPPAPSQDTS"
     regulatory      1490..1495
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /note="hexamer: AATAAA"
     polyA_site      1526
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /note="major polyA site"
     regulatory      3195..3200
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /note="hexamer: AATAAA"
     polyA_site      3214
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
     regulatory      3300..3305
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
                     /note="hexamer: AATAAA"
     polyA_site      3324
                     /gene="BOD1L2"
                     /gene_synonym="BOD1P; FAM44C"
ORIGIN      
        1 aggcggttgc tgccgcgtct tccacaacct ccgcggtctg gagctggcct cccccaccgc
       61 cgccccaacc accggccccg ccgccatcac caccaccgtc acctccgccg ctgcctcctt
      121 ggggccctcc tccttcaccg cccccttagc cacctctaca cattctaggc tttctgtcct
      181 ggagaagaag ctataatcgg tttccttgtg ggcccggtgc gcagccatgg cggacggtgg
      241 cggcggcggc agcggcggtg cgggcccggc ctcgacccgg gccagcgggg gcggcggccc
      301 catcaacccg gcctcgttgc cccctggcga ccctcagctc atcgctatca tcgtggggca
      361 gctcaagagc aggggccttt ttgacagctt ccgccgggac tgcaaggctg acgtggacac
      421 caagccagct taccaaaacc tgagccagaa agcggataat tttgtgtcga cacatctgga
      481 caagcaggaa tggaatcctc cagcaaacga caaccaactg cacgatggtc tgaggcagag
      541 tgtggttcag tcagggaggt cagaagctgg agtggacagg attagttctc aggtggtgga
      601 tccaaaacta aaccacatct tcaggccaca aatagaacaa ataattcatg aattcctggt
      661 ggcccagaaa gaagcagctg tgccagcact ccctccagag ccagaaggcc aggaccctcc
      721 agctccgtct caggacactt cctaagaata tgcctgacag cttttgaaag cgctatttaa
      781 tttttggtga agaaatggat tcggttacat aagagtgcag tttcagattg aagataagcc
      841 aagttcatca ctgagctcaa gatttccacc tcgaccatga gcagtgacca gattgaaagg
      901 gaagcaagtt cgccagagag aaagttgacc gtggcaccct cctgcattgc gctgccattt
      961 ggccagcctt tccaagggca tgacaccaaa cacacactac agagagggaa acactaccgc
     1021 gacccaggat tgtcctgaaa cagacatcta tacttgaaca tggagactgc acatggattt
     1081 tagggtttgt gctctgagat aaacgaaagc tacagcgaga gaacataacc aatcccaaag
     1141 acaatttcaa agaacaatga cagtaaaggt taactgggag gaatatttga cagtacttat
     1201 ttgatattgt ctctcagagt tgcaaactag attgtacaca acattagtgt cagatagctt
     1261 tgaagttgtg accttcttgt acatgaatct tctagccagt ttcctttcct ttgtaagaga
     1321 taacaaagca tgaaacccta gaatgagtga gaagttcaga cattaggtat aaggaaactc
     1381 atttgcagac tctctgtcca agaatgcttc ctgtcttgca ggggctagtg agtcttgggt
     1441 gtgtttatgt tatgctcaca tttgtgtttt atttgaaaag tggatggtca ataaatggct
     1501 tatctttcaa ctgcaacaac aaaaaagaaa tgcagattta catccttttc ctctttaagc
     1561 tccgtcagtt ttctgatatt tctagaaggt cagacacctg gcatggttta tgaggcccgt
     1621 gataatgggg cccctggtca cctctgctgc cccgtacact gtcatttctc atatgacaac
     1681 catgcccatg actatcctgg acaccctgtg ttccctctgc tcactgtgaa gggaatgccc
     1741 tcaaccactc ctaccctcct ttaagactca gctcctgagg agccacacat cgtctaagca
     1801 ggagtgacag actccttcct ctgtgctccc atagatctca taagggatga ccacacttac
     1861 tatagtagct aggtctgacg aagcacttgc tctattgctc tacagctggc agtgtactaa
     1921 acgcttaact tcgcttaccg tagtaagtcc tcatgatcta attgaagaaa tcgtatcttt
     1981 attcccattt ttattcccat ttataaatgt agaaaccaaa gctcagacac tgcctaagtg
     2041 gtggggctgg ggctgagcct gtattgagca cagagccctc acttttaacc cttttaacca
     2101 tgcttttagc cacaccacct caccacagtg aactgtcttt gcttacagat ctgtcatccc
     2161 cacttaaatg tgagcttcct ccagggcagg gatttgcttt gttcatttct tttccttaac
     2221 cccaggacct agcacatcac aggagctcag caatttgtag aaagaaacca gttctggatt
     2281 tgtcttttcc aacatttaat ttctcagatg gcagtattta tcatctaaaa agtgaacaaa
     2341 aattaatttt gcatctagtg tctacatgtc taagcaagaa agagctttct tatccctgga
     2401 ggtattttat ctgtaatgtt tacctatgag ctattttaaa tgattcttca aaatttagag
     2461 tccagaaggt agaagaccat gtcctttctg aaaatgtccc ttcctttccc aggtaccagg
     2521 ctctttttaa aattagcttc tgaatatgaa caacccagct ctttaaagtt taatgtccca
     2581 gccattttaa ttgtttcttt cgaagtacaa aagagcagct gggccacatc ggcactaatc
     2641 acttgccaac tttccttttt acaaaaacag ctaagctctt tctgagattt aaaatcactc
     2701 catctgagac cccagcttgg cacctatctt tgcactaaca taaaaggaac ctaatttctg
     2761 cttttaagaa atgtgttgcg gaagtgattt ttggtttggg gtttgttctc cttcttcttt
     2821 ttaaaaataa cgtaataaag tgtaatacaa cttttaaagt tttttttttc ctttaccagt
     2881 tctctattct ccttttctac ttgaattgtc ctgagacagg ttgccagata aaatacaggt
     2941 tgctcagcaa atgtgaattt cagagaaaca acagatactc tcctagggca tggaccgtgc
     3001 aatatttgaa acatacttgt attaaaaagt tatttgttgt ttatttgaaa ttcaaattta
     3061 ctggggcccc atgctttagt ttgccaaatc tgccaaccat agcctgaatg cttcccgttc
     3121 ccaccatgag tttggcaaat ggaaaatgct aacctatgcg atggacactg ctgtattctg
     3181 aaaatgaata tgtaaataaa tcaaactacc gtgacttgag agagctcatt acgtgcgtgc
     3241 gtgcatgcct gcccactggt ccctgctaaa taattccctt cttgcaatcc agaaggataa
     3301 ataaatgtaa tttctggaat tcta
//
