LOCUS       XM_011543930            6337 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens BCL6 corepressor (BCOR), transcript variant
            X3, mRNA.
ACCESSION   XM_011543930
VERSION     XM_011543930.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011543930.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6337
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..6337
                     /gene="BCOR"
                     /gene_synonym="ANOP2; MAA2; MCOPS2"
                     /note="BCL6 corepressor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 26 ESTs, 886 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:54880"
                     /db_xref="HGNC:HGNC:20893"
                     /db_xref="MIM:300485"
     CDS             207..5474
                     /gene="BCOR"
                     /gene_synonym="ANOP2; MAA2; MCOPS2"
                     /codon_start=1
                     /product="BCL-6 corepressor isoform X1"
                     /protein_id="XP_011542232.1"
                     /db_xref="GeneID:54880"
                     /db_xref="HGNC:HGNC:20893"
                     /db_xref="MIM:300485"
                     /translation="MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLE
                     LREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVYSSLCGLGSEKGR
                     EAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAV
                     ATAEALGLDRPASDKQSPLNINGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMY
                     KALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTPSASPAI
                     PPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLP
                     PSPRPSPRVHLPTQPAADTYSEFHKHYARISTSPSVALSKPYMTVSSEFPAARLSNGK
                     YPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDV
                     DASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSS
                     WVVPGPSPNEENNGKSMSLKNKALDWAIPQQRSSSCPRMGGTDAVITNVSGSVSSAGR
                     PASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEP
                     SFKANENGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPH
                     PVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKE
                     EKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVV
                     KSDKLVYVDLLREEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALR
                     EELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPFLEPPLGSDGPAVTF
                     GKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGY
                     VGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKE
                     REGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERCEYSVGNKH
                     RDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTE
                     TTAEEVPEDPLLKAKRRRVSKDDWPEREMTNSSSNHLEDPHYSELTNLKVCIELTGLH
                     PKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRA
                     EAKGNRSWSEESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAK
                     QQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQESRRGLP
                     LTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPC
                     SSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRD
                     NAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSY
                     GADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDD
                     ESGYDVLANPPGPEDQDDDDDAYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSD
                     VLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKELLDL
                     VEFTNEIQTLLGSSVEWLHPSDLASDNYW"
ORIGIN      
        1 gcaatccatt catgcactga agcgcgtgca gagctgctga tcgctgccat tgttactcgc
       61 gggcggtgtg ggagctgagc ctccactctg gcgagagata aatggcctct gacagcccct
      121 cctcgccaag agagctcctc ggatttcacc gcgcggcggc tctcagacta gacgcttgaa
      181 gcaaagctgc catcccagaa gacgacatgc tctcagcaac ccccctgtat gggaacgttc
      241 acagctggat gaacagcgag agggtccgca tgtgtggggc gagcgaagac aggaaaatcc
      301 ttgtaaatga tggtgacgct tcaaaagcca gactggaact gagggaagag aatcccttga
      361 accacaacgt ggtggatgcg agcacggccc ataggatcga tggcctggca gcactgagca
      421 tggaccgcac tggcctgatc cgggaagggc tgcgggtccc gggaaacatc gtctattcta
      481 gcttgtgtgg actgggctca gagaaaggtc gggaggctgc cacaagcact ctaggtggcc
      541 ttgggttttc ttcggaaaga aatccagaga tgcagttcaa accgaataca cccgagacag
      601 tggaggcttc tgccgtctct ggaaaacccc caaatggctt cagtgctata tacaaaacac
      661 cgcctggaat acaaaaaagt gctgtagcca cagcagaagc gctgggcttg gacaggcctg
      721 ccagcgacaa acagagccct ctcaacatca atggtgctag ttatctgcgg ctgccctggg
      781 tcaatcctta catggagggt gccacgccag ccatctaccc tttcctcgac tcgccaaata
      841 agtattcact gaacatgtac aaggccttgc tacctcagca gtcctacagc ttggcccagc
      901 cgctgtattc tccagtctgc accaatgggg agcgctttct ctacctgccg ccacctcact
      961 acgtcggtcc ccacatccca tcgtccttgg catcacccat gaggctctcg acaccttcgg
     1021 cctccccagc catcccgcct ctcgtccatt gcgcagacaa aagcctcccg tggaagatgg
     1081 gcgtcagccc tgggaatcct gttgattccc acgcctatcc tcacatccag aacagtaagc
     1141 agcccagggt tccctctgcc aaggcggtca ccagtggcct gccgggggac acagctctcc
     1201 tgttgccccc ctcgcctcgg ccgtcacccc gagtccacct tcccacccag cctgctgcag
     1261 acacctactc ggagttccac aagcactatg ccaggatctc cacctctcct tcagttgccc
     1321 tgtcaaagcc atacatgaca gttagcagcg agttccccgc ggccaggctc tccaatggca
     1381 agtatcccaa ggctccggaa gggggcgaag gtgcccagcc agtgcccggg catgcccgga
     1441 agacagcggt tcaagacaga aaagatggca gctcacctcc tctgttggag aagcagaccg
     1501 ttaccaaaga cgtcacagat aagccactag acttgtcttc taaagtggtg gatgtagatg
     1561 cttccaaagc tgaccacatg aaaaagatgg ctcccacggt cctggttcac agcagggctg
     1621 gaagtggctt agtgctctcc ggaagtgaga ttccgaaaga aacactatct cctccaggaa
     1681 atggttgtgc tatctataga tctgaaatca tcagcactgc tccctcatcc tgggtggtgc
     1741 ccgggccaag tcctaacgaa gagaacaatg gcaaaagcat gtcgctgaaa aacaaggcat
     1801 tggactgggc gataccacag cagcggagtt catcatgccc gcgcatgggc ggcaccgatg
     1861 ctgtcatcac taacgtttca gggtcagtgt cgagtgcagg ccgcccagcc tccgcatcac
     1921 ccgcccccaa tgccaatgca gatggcacca aaaccagcag gagctctgta gaaaccacac
     1981 catccgttat tcagcacgtg ggccagcccc cggccactcc tgccaagcac agtagcagca
     2041 ccagcagcaa gggcgccaaa gccagcaacc cagaaccgag tttcaaagca aacgagaacg
     2101 gccttccacc aagctctata tttctgtctc caaatgaggc attcaggtcc ccaccaattc
     2161 cctaccccag gagttacctc ccttacccag cccctgaggg cattgctgta agtcccctct
     2221 ccttacatgg caaaggacct gtctaccctc acccagtttt gttacccaat ggcagtctgt
     2281 ttcctgggca ccttgcccca aagcctgggc tgccctatgg gcttcccacc ggccgtccag
     2341 agtttgtgac ctaccaagat gccctggggt tgggcatggt gcatcccatg ttgataccac
     2401 acacgcccat agagattact aaagaggaga aaccagagag gagatcccgg tcccatgaga
     2461 gagcccgtta cgaggaccca accctccgga atcggttttc cgagattttg gaaactagca
     2521 gcaccaagtt acatccagat gtccccaccg acaagaacct aaagccgaac cccaactgga
     2581 atcaagggaa gactgttgtc aaaagcgaca agcttgtcta cgtagacctt ctccgagaag
     2641 aaccagatgc taaaactgac acaaacgtgt ccaaacccag ctttgcagca gagagtgttg
     2701 gccagagcgc tgagcccccc aagccctcag ttgagccggc cctgcagcag caccgtgatt
     2761 tcatcgccct gagagaggag ttggggcgca tcagtgactt ccacgaaact tatactttca
     2821 aacagccagt cttcaccgta agcaaggaca gtgttctggc aggtaccaac aaagagaacc
     2881 tagggttgcc agtctcgact ccattcctgg agccacctct ggggagcgat ggccctgctg
     2941 taacttttgg taaaacccaa gaggatccca aaccattttg tgtgggcagt gccccaccaa
     3001 gtgtggatgt gacccccacc tataccaaag atggagctga tgaggctgaa tcaaatgatg
     3061 gcaaagttct gaaaccgaag ccatctaagc tggcaaagag aatcgccaac tcagcgggtt
     3121 acgtgggtga ccgattcaaa tgtgtcacta ccgaactgta tgcagattcc agtcagctca
     3181 gccgggagca acgggcattg cagatggaag gattacaaga ggacagtatt ttatgtctac
     3241 ccgctgctta ctgtgagcgt gcaatgatgc gcttctcaga gttggagatg aaagaaagag
     3301 aaggtggcca cccagcaacc aaagactccg agatgtgcaa attcagccca gccgactggg
     3361 aaaggttgaa aggaaatcag gacaaaaagc caaagtcggt caccctggag gaggccattg
     3421 cagaacagaa cgaaagtgag agatgcgagt atagtgttgg aaacaagcac cgtgatccct
     3481 ttgaagcccc agaggacaaa gatcttcctg tggagaagta ctttgtggag aggcagcctg
     3541 tgagcgagcc tcccgcagac caggtggcct cggacatgcc tcacagcccc accctccggg
     3601 tggacaggaa acgcaaagtc tcaggtgaca gcagccacac tgagaccact gcggaggagg
     3661 tgccagagga ccctctgctg aaagccaaac gccgacgagt ctctaaagat gactggcctg
     3721 agagggaaat gacaaacagt tcctctaacc acttagaaga cccacattat agtgagctga
     3781 ccaacctgaa ggtgtgcatt gaattaacag ggctccatcc taaaaaacaa cgccacttgc
     3841 tgcaccttag agaacgatgg gagcagcagg tgtcggcagc agatggcaaa cctggccggc
     3901 aaagcaggaa ggaagtgacc caggccactc agcctgaggc cattcctcag gggactaaca
     3961 tcactgaaga gaaacctggc aggaaaaggg cagaggccaa aggcaacaga agctggtcgg
     4021 aagagtctct taaacccagt gacaatgaac aaggcttgcc tgtgttctcc ggctctccgc
     4081 ccatgaagag tctttcatcc accagtgcag gcggcaaaaa gcaggctcag ccaagctgcg
     4141 caccagcctc caggccgcct gccaaacagc agaaaattaa agaaaaccag aagacagatg
     4201 tgctgtgtgc agacgaagaa gaggattgcc aggctgcctc cctgctgcag aaatacaccg
     4261 acaacagcga gaagccatcc gggaagagac tgtgcaaaac caaacacttg atccctcagg
     4321 agtccaggcg gggattgcca ctgacagggg aatactacgt ggagaatgcc gatggcaagg
     4381 tgactgtccg gagattcaga aagcggccgg agcccagttc ggactatgat ctgtcaccag
     4441 ccaagcagga gccaaagccc ttcgaccgct tgcagcaact gctaccagcc tcccagtcca
     4501 cacagctgcc atgctcaagt tcccctcagg agaccaccca gtctcgccct atgccgccgg
     4561 aagcacggag acttattgtc aataagaacg ctggcgagac ccttctgcag cgggcagcca
     4621 ggcttggcta tgaggaagtg gtcctgtact gcttagagaa caagatttgt gatgtaaatc
     4681 atcgggacaa cgcaggttac tgcgccctgc atgaagcttg tgctaggggc tggctcaaca
     4741 ttgtgcgaca cctccttgaa tatggcgctg atgtcaactg tagtgcccag gatggaacca
     4801 ggcctctgca cgatgctgtt gagaacgatc acttggaaat tgtccgacta cttctctctt
     4861 atggtgctga ccccaccttg gctacgtact caggtagaac catcatgaaa atgacccaca
     4921 gtgaacttat ggaaaagttc ttaacagatt atttaaatga cctccagggt cgcaatgatg
     4981 atgacgccag tggcacttgg gacttctatg gcagctctgt ttgtgaacca gatgatgaaa
     5041 gtggctatga tgttttagcc aaccccccag gaccagaaga ccaggatgat gatgacgatg
     5101 cctatagcga tgtgtttgaa tttgaatttt cagagacccc cctcttaccg tgttataaca
     5161 tccaagtatc tgtggctcag gggccacgaa actggctact gctttcggat gtccttaaga
     5221 aattgaaaat gtcctcccgc atatttcgct gcaattttcc aaacgtggaa attgtcacca
     5281 ttgcagaggc agaattttat cggcaggttt ctgcaagtct cttgttctct tgctccaaag
     5341 acctggaagc cttcaaccct gaaagtaagg agctgttaga tctggtggaa ttcacgaacg
     5401 aaattcagac tctgctgggc tcctctgtag agtggctcca ccccagtgat ctggcctcag
     5461 acaactactg gtgagcaagc tggacccacc atgtacagtg tgttatagtg ttaatccttg
     5521 tgcatatgtg tcataataca actatttctg taaagaaagg acactattac atatgaaaat
     5581 atctcttctt tatataagag aaattactcc agtcagaagg acttagaaac atgttttttt
     5641 ccttttaaac ttttaagtca gtttttatga agttgttata atgtttcttt acttttcaat
     5701 gcacacatgc tttgggatac gtttgttttt acttggaaca tttgtttctt ttctttttta
     5761 aggagaaaaa aaaatgagta aaaggagctc cacactttga cttaatttca tacaaagctc
     5821 tgatgacagg ccatgactgt agagtggtca gaactgtgtg gttggtttga gggagcgaat
     5881 tcggggaagg cacttggtga tataactttg ttttgtttac agagtacctg ctcgggccag
     5941 gtaaatgcta ttggatgtaa tccagtagtg tgtaatataa attcaaacca tatccacaca
     6001 caacaactaa ttgtatgaaa cttttatatc ctaatttaaa agctgtgaaa ttagttttca
     6061 cgcatcaaac cggattgttt atatgtttaa acattttatg ctcttattta aagaagactt
     6121 tgagctattt ttttctgtac cctgtaaaat attgaaaact aacataatat gttgaggttg
     6181 cttggaaatg tacataaaac taaaattttc tgaatcgtgt gtttatgttt gaaatctgtg
     6241 ttttaacttt gtaagtaaat tctctgcctt tgtatttata ttttacaaaa attttcttaa
     6301 aaggcaataa aactgttgag gaaaggagaa aattgaa
//
