LOCUS       NM_001367774            6769 bp    mRNA    linear   PRI 12-JUN-2024
DEFINITION  Homo sapiens BCLAF1 and THRAP3 family member 3 (BCLAF3), transcript
            variant 2, mRNA.
ACCESSION   NM_001367774 XM_011545475
VERSION     NM_001367774.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6769)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 6769)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732366.7 and AL772197.12.
            This sequence is a reference standard in the RefSeqGene project.
            
            On or before Mar 26, 2021 this sequence version replaced
            XM_011545475.2, NM_001367774.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR4368410.268621.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000379682.9/ ENSP00000369004.4
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-154               AL732366.7         17200-17353         c
            155-229             AL772197.12        100858-100932       c
            230-799             AL772197.12        96714-97283         c
            800-1462            AL772197.12        95678-96340         c
            1463-1638           AL772197.12        86025-86200         c
            1639-1753           AL772197.12        84412-84526         c
            1754-1817           AL772197.12        83622-83685         c
            1818-1933           AL772197.12        81387-81502         c
            1934-2048           AL772197.12        68052-68166         c
            2049-2138           AL772197.12        66443-66532         c
            2139-2294           AL772197.12        60419-60574         c
            2295-6769           AL772197.12        43494-47968         c
FEATURES             Location/Qualifiers
     source          1..6769
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xp22.12"
     gene            1..6769
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /note="BCLAF1 and THRAP3 family member 3"
                     /db_xref="GeneID:256643"
                     /db_xref="HGNC:HGNC:27413"
     exon            1..154
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            155..229
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     CDS             189..2324
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /note="isoform 2 is encoded by transcript variant 2;
                     uncharacterized protein CXorf23"
                     /codon_start=1
                     /product="BCLAF1 and THRAP3 family member 3 isoform 2"
                     /protein_id="NP_001354703.1"
                     /db_xref="CCDS:CCDS94576.1"
                     /db_xref="GeneID:256643"
                     /db_xref="HGNC:HGNC:27413"
                     /translation="MARSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPK
                     RPVAWRMDSEKHGQSKPRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPG
                     RGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIA
                     DSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTS
                     KRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATK
                     VSYDYRHKRPKLLDGDQDFSDGRTQKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQ
                     DGQVKEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDK
                     SQKLPDVKPSPINLRKKSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENF
                     HPVFEHLDSTQNTENKPTGEFAQEIITIIHQVKANYFPSPGITLHERFSTMQDIHKAD
                     VNEIPLNSDPEIHRRIDMSLAELQSKQAVIYESEQTLIKIIDPNDLRHDIERRRKERL
                     QNEDEHIFHIASAAERDDQNSSFSKVKNVHTDGFQKPTHFIKSNFRKCIEKPYMNYTT
                     QRKDIITHKPFEVEGNHRNTRVRPFKSNFRGGRCQPNYKSGLVQKSLYIQAKYQRLRF
                     TGPRGFITHKFRERLMRKKKEYTDVATGI"
     exon            230..799
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            800..1462
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            1463..1638
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            1639..1753
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            1754..1817
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            1818..1933
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            1934..2048
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            2049..2138
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            2139..2294
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     exon            2295..6769
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3345..3350
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /note="hexamer: AATAAA"
     polyA_site      3374
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /note="major polyA site"
     regulatory      6747..6752
                     /regulatory_class="polyA_signal_sequence"
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /note="hexamer: AATAAA"
     polyA_site      6769
                     /gene="BCLAF3"
                     /gene_synonym="CXorf23"
                     /note="major polyA site"
ORIGIN      
        1 ggttccgggt cccgcggccc ggcagaggtg gctggggtgt cgctgctgtg ggaggcggcg
       61 gcagagtgag gggcgaggcc cgaggggccg gcggcggcgg cggcggcggc ggcggcggcg
      121 gcggcggcgg cggcggcggg ggcttcccgg ccggtgtaaa aagtggatag tggctcacgt
      181 gtcaaaggat ggcacggtca cgatctagat cccccaggtg gaaacacagg tctttatcac
      241 cagtacctag aaatgctgaa cactacaagc aaagacattc acacgggcat tatggctgtg
      301 aatataggaa ggatccaaaa agacccgtcg cgtggagaat ggacagtgag aaacatggac
      361 agagtaaacc aaggattccc tctcgtggaa atatatatta ccagtcttat gaacatagat
      421 caccttcccc taacataaga aactctttag aaaatgttta tatgtataag cctcacagag
      481 gatattcgcc tggaagaggg gacagtaaca ggagagctca gtatatgccc aaatactcag
      541 agggtatacc ctacaaagag catgaaagga attcttatcc ccagaaagtg caaggagggc
      601 atagtcctga tgaccacaga gttagaggaa gtggaaaagg agggaaacca cctcagaggt
      661 caatagcaga ttcttttaga tttgaaggaa agtggcatga agatgagttg aggcaccaga
      721 ggatacaaga agaaaaatac tcccagtcaa ctagaagagg ctctgaagac tttgagacaa
      781 ggagctcatt tcagaagagg tatcctgagg atcgtgattt cagaaaatat ggacacacat
      841 caaaaagacc taaagacgtg gagaggtatg aaagcagaga gcctgccagg aacccaaagt
      901 ggaagcctga gcattccctc ccaccttacc aagaggacac agaccagtgg aaccttgggc
      961 cccaaactta tcgacatgct gagagggaac acccagagac cagttcagca accaaagtat
     1021 cctatgacta tcgtcacaaa cgtcctaagc tcttggatgg ggaccaggac ttttctgatg
     1081 ggagaactca gaagtactgt aaggaagaag atagaaaata tagttttcaa aaaggccctc
     1141 taaatagaga gttagattgt tttaatactg gaagagggag agagactcaa gatggacaag
     1201 tcaaagaacc ttttaaaccg tctaagaaag acagcattgc ctgtacttat tcaaataaaa
     1261 atgatgttga tttgcgatct agtaatgaca aatggaagga aaaaataaag aaagaagggg
     1321 attgtagaaa agagagcaat tcttccagta accaacttga taaaagtcaa aaacttcctg
     1381 atgtgaaacc ctcgcctatc aatcttagga agaaatcact tacagttaaa gtagatgtga
     1441 agaaaacagt agatacattc agggttgctt ctagctattc cacagagaga cagatgtcac
     1501 atgatttggt tgctgttggc aggaaaagtg agaactttca tccagtgttt gaacatcttg
     1561 actcaactca gaatactgaa aacaaaccta caggagaatt tgctcaggaa atcataacaa
     1621 taatccatca agttaaagca aattattttc catcacctgg cattacttta catgagcgtt
     1681 tctcaacaat gcaagatata cacaaggcag atgtaaatga aattccattg aattcagatc
     1741 cagaaataca caggagaata gatatgtctt tggccgagct tcagagtaaa caagctgtga
     1801 tctatgaatc ggaacagact ctgatcaaaa taatagatcc aaatgaccta cgacatgaca
     1861 ttgaaagaag gcgaaaagaa cggttacaga atgaagatga gcacattttt cacatagcta
     1921 gtgctgcaga gagggatgat cagaattcca gtttttcaaa ggtaaagaat gttcatactg
     1981 atggattcca aaaacccaca cattttataa aatcaaattt tagaaaatgt attgaaaaac
     2041 cttacatgaa ttatactacg cagagaaaag acataattac tcacaaacca tttgaggttg
     2101 agggaaacca ccgaaacaca agagtaagac cttttaagag caactttaga ggtggcagat
     2161 gccagcccaa ttataaatca ggcctggtac agaagagctt gtacattcag gctaagtatc
     2221 agcgtttacg gttcactggc ccaaggggat ttatcactca taagttcaga gaaagattaa
     2281 tgagaaaaaa gaaggaatat acagatgttg ccacaggaat ctaatctgaa atcgtacaaa
     2341 tggaaatgac gctacaggag gatgtttggg agcatctctc tctttttgtc aggagttaga
     2401 agtgacacta aggcactaat actgtaactt cttgataaaa taactttatt ttttagtagt
     2461 ggaatgctgc aactttttta cacctaacaa ttgcttttaa attacagtat tcaatttaaa
     2521 agttgtatta actacagttt cctttgcaaa aagtctcaaa agaatcactt gaagggcatt
     2581 atttgttgat gcatttttct ctgagcatgg tttcatagag agaacttcac caagtaatat
     2641 tcagacgttt atatgttgaa agttttgctt acataataaa aacaaaaaca agtgtctgaa
     2701 ttgtatagtg tctttacatg aaagaacttt aaacagtggc cttatggtag aaaattttat
     2761 accagatttt tctttttctg atgacatttt ggcttataac tcgaagtttt cttaagtttc
     2821 tgaagatcaa ggcctatata attcatacat ttcatattat aagaaggcaa gagacaaggt
     2881 gcttcaaata ttccatcagg tagttgtgag tgcactgaat ttttagtaat atgttcattc
     2941 agtttttttc cacaactatt tgctcttttc caatttcaaa atgctattgt ggaaaatatg
     3001 taaagatttt gtaatctata gtccatctta tttttccctc agggcaagct tgtgcatatc
     3061 atatttttaa aggcttttta aaaatctgac aaacaaaatc tcatatttga aaattgtact
     3121 ttactactac agcattacac attttgcaag cacatcttat agagtgttta cttttagttc
     3181 agttgatatg tattgcatac ctactatgtg taagagcaaa tggatgggat ttttaaatga
     3241 aatttttagg ccccaatacc ttatttcttt atgttttctg tgttctgctt aacagtacat
     3301 atacattccc aattacattt ttgtgaaatg tttatttgta ataaaataaa atgttgttgc
     3361 tctttctgct taaataagtt acttgccagt ttgtgagagc attattttaa ttttgtttga
     3421 gacttatagc cttggatagc acctctgttt aaacagtgtt taaagcactg ttctgtgctt
     3481 acaaagacag agctttcaaa attaaaatgt gaaggttgat aagaacttgg tttttcatga
     3541 ctggatgtga aaaatcttag tacattcagt tttcttgtcc atatctttaa aagagagggc
     3601 agccttttcc ttaagtgagt tcatgataag gggggcaagt gcacttgatt cattgctaag
     3661 caggtaataa atttgggtag atggcctgtc ttgtactgtg tacaatctct ataggtcagg
     3721 ttttccaaac atatttagca ttccacttat ggtaagaaag aaatgcatgc acacaggtag
     3781 tatggcaact ttatattgtg ttaggtactt ataaaatctg tcttaaattt taaaataatt
     3841 gatttcattt actcccatat tctaggggac agtaatgagc tttgaatatt taatcatttg
     3901 attgacaact atgtattgca cagatactgt actaaaatta cagcaatgaa caagaagaca
     3961 agacacatgg accctgcctt tatggtacga agagtctaat aggaaaaatg gacattaaac
     4021 agaaatataa cttggtaaat cgcctttata gctcgctttt tatttattgt aacacataaa
     4081 ggtaagatgg ctgatttact attattcatt ccacaactga ttccctattt ggatattctt
     4141 ttggcactgt ctcaatatgc aaagcgtgtt atctgcaaaa tacctgtgca gaaaacattg
     4201 tgtgtataag atctaaagcc taaaaggaaa aaccaacttt ataatttaga gtataaaata
     4261 aggacaggga ccgtgtctgt cttgtccacc atagtatccc cagcacccag cttcctattt
     4321 gacgtgtggt aagagttcat taaatattag ttgaataatg aatgaataaa tagggaataa
     4381 tagaatatgt ttattaggaa ctacatgtgt aattttcata tggagattga acaaaaggtt
     4441 atccatagca ttttttattg actggaaaga atttgacttc ttgaatgcat aagacttgag
     4501 aagagaagtt tttttttttt ttcttttttt tgataagtcc cctaccattg cctcctcacc
     4561 ttcctccact acgtgctagg cccttcgctg gtactgggaa gacaaagata ataagacaca
     4621 gtccctgctg tgaggaagct catgcactgc tgaagaagag attcacaaaa acaaagaatc
     4681 acaatgtaga gtaagtactt tagtggacat atatacaaaa ggttgagagg aaagttgaca
     4741 tttctgattc agcatcccct cgtcatgttt ctttcctatt ggtttcacca acctcagaag
     4801 gcactattct gttggtggtt ttactggttt taaaaattga tgcattgggg gaaactgggt
     4861 aaattgtacg cgggatctct ctgtattatt tcttttatag ctgcatgtga atctagagtt
     4921 acttcaacat aaatttcaat ttgaagaatt gcccatagtc ttatcacaga gaacactatt
     4981 ataaatattt tagatgatac attttcattt ttttctattg gaaaaaaact cgctacattt
     5041 atgtgtaaca atttatgtag atgtatacta tgtaccacat tttacctaat aaatcctaca
     5101 tttttgaata gttttttttt taaaaaaaag acggggatac ttccaggcag aagcaagaaa
     5161 agtaaagctg gatgagaaac tcttattgtc tttattaccc agcaaattca gtaaccacca
     5221 ggcacaaatt caccaggaac aaccaagcaa ggaaggaaga agaagctgat gcaacaaggt
     5281 gtggtatgac ttcatccctc gcccatcccc agaagtagca ctgagtaaaa caatggagat
     5341 gacaaaaata ttggtaacag tgggccccag tatggacaaa ggcactgacg aggtgaccag
     5401 gccacgtgga ggagagtcaa ggaaaactct tgggacaacg aagtctttgc ttccatctca
     5461 ggacctcagc agaaggggta agattcacca ggactaggca tttcccaggt ctcagagcag
     5521 cctgggaaag ccaaatcctg cagaagtcag agacaccttt gactgtgtct agtgagttct
     5581 ggttctggac atttaatggg aacctagaag agaggggata ccaggttccc caacaaagtt
     5641 ccgtcaaata ggatgattat gagctctgag tccattaaaa tacagaatga acatttaaga
     5701 actgaggaat catagatgta gaatagtatg taaatgttat aaatcttgac aaagaaaaat
     5761 taatgtacat tgacaaattc agacatggag gaggtaaagt gggataaaga cttaagaact
     5821 aaccgtctca tcattcatgg ccaggtgtca tgtcacgtca tgtcttaaaa ttataatatg
     5881 gggaaaaacg ctagtgacca accttaagtt tttccacaat cttttttttc cttgacctta
     5941 atacagtggt tctcaaagtg tggtcccaga ccagcaacat cagcatcacc tgagaacttg
     6001 ttaaaaatgc agattcttgg ccccacccca gacctcctga atcagaaacc ctgggggtgg
     6061 ggccaagcaa tctgtgattt aacaagtcct ccaggggatt ctggcacata cttgagtttg
     6121 agaataactg gcttatttat cccttttagg aaccaatgaa gaaacattta tctgaagttc
     6181 agcagcccct tcaatttaat gcctaatttt ttttctattg cattcaaata aagttaaatc
     6241 taaaacttgt ttgctggccg ggcacagtga gtcacgcctg taatcccagc actttgggag
     6301 gccgaggcga gtggatcact tgaggtcagg agtttgagac cagcctggcc aatatggtga
     6361 aaccccatct ctaataaaaa tacataaatt agccgggcgc agtagcatgc acctgtaatc
     6421 ccagctacct gggaggctga ggcaggagaa ttgcttaaac ccgggaggcg aaggttgcag
     6481 tgaaccgagg ccacgccatt gcactccagc ctgggcgaca gagcgagact ccatgtcaaa
     6541 aaagaaaata aataaataaa acttgttaga ataaaaagtt tagggattcc ccccgtcaat
     6601 cctgtctgta catatgagtg aattgagagg tctggaaaca tacccaccca ctgttaacac
     6661 tgttgatttt tttaaatggt gggattatga gtgactgtac tcttctgtat ctatcaaata
     6721 taatgaatgt tgtatcattt ttataaaata aagtctttct tttttaaaa
//
