LOCUS       XM_047428681            5300 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens beta-1,4-N-acetyl-galactosaminyltransferase
            1 (B4GALNT1), transcript variant X5, mRNA.
ACCESSION   XM_047428681
VERSION     XM_047428681.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5300
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..5300
                     /gene="B4GALNT1"
                     /gene_synonym="GALGT; GalNAc-T; GALNACT; SPG26"
                     /note="beta-1,4-N-acetyl-galactosaminyltransferase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 40 ESTs, 461 long SRA reads, 8
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 8 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:2583"
                     /db_xref="HGNC:HGNC:4117"
                     /db_xref="MIM:601873"
     CDS             133..1965
                     /gene="B4GALNT1"
                     /gene_synonym="GALGT; GalNAc-T; GALNACT; SPG26"
                     /codon_start=1
                     /product="beta-1,4 N-acetylgalactosaminyltransferase 1
                     isoform X5"
                     /protein_id="XP_047284637.1"
                     /db_xref="GeneID:2583"
                     /db_xref="HGNC:HGNC:4117"
                     /db_xref="MIM:601873"
                     /translation="MQERARRKEAGRPWGLGSEGRGTGKTAAGSANPSAMCGVESALG
                     SRQEPLRTRGPRAPSLALPSSLPFSLPTLPPPRMWLGRRALCALVLLLACASLGLLYA
                     STRDAPGLRLPLAPWAPPQSPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCE
                     SSGGGLPLPFQKQVRAIDLTKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAPA
                     NSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLT
                     GEGQADLTLVSPGLDQLNRQLQLVTYSSRSYQTNTADTVRFSTEGHEAAFTIRIRHPP
                     NPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALITSIRRFYPTVTVVIADDSD
                     KPERVSGPYVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFVFTARTRLERLVDV
                     LERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGLGNCLRQRRGFHHELVGFPGCVV
                     TDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVVVDHASKLKL
                     PWTSRDAGAETYARYRYPGSLDESQMAKHRLLFFKHRLQCMTSQ"
ORIGIN      
        1 cggcgggctt ggggactgcc actgccctga tagagcgggg cttttccgct tacgcacggc
       61 cgcgtcgaaa ccgcggcatc caaatgtctt cagcattaag atgccaggcc tcgggtgtgt
      121 gaggaaaccg agatgcagga gagggcgaga agaaaggagg ccgggagacc ctggggcctg
      181 ggaagtgagg ggaggggtac cgggaaaacc gcggctggca gtgcaaaccc tagcgcgatg
      241 tgtggagtgg agagcgctct tgggagccgg caggagcctc tgaggacgcg ggggccaagg
      301 gccccatccc ttgccctccc ttcttccctc cctttctcac tccccaccct acccccacct
      361 aggatgtggc tgggccgccg ggccctgtgc gctctggtcc ttctgctcgc ctgcgcctcg
      421 ctggggctcc tgtacgcgag cacccgggac gcgcccggcc tccggctacc tcttgcgccg
      481 tgggcgcccc cgcaaagccc ccgcaggccc gagctgccag atcttgctcc tgagccccgc
      541 tacgcacaca tcccggtcag gatcaaggag caagtagtgg ggctgctggc ttggaacaac
      601 tgcagttgtg agtccagtgg ggggggcctc cccctcccct tccagaaaca agtccgagct
      661 attgacctca ccaaggcctt tgaccctgca gagctgaggg ctgcctctgc cacaagagag
      721 caggagttcc aggcctttct gtcgaggagc cagtccccag ctgaccagct gctcatagcc
      781 cctgccaact ccccgctcca gtacccccta cagggtgtgg aagttcagcc cctcaggagc
      841 atcttggtgc cagggctgag ccttcaggca gcttctggtc aggaggtata ccaggtgaac
      901 ctgactgcct ccctaggcac ctgggacgtg gcaggggaag tgactggagt tactctcact
      961 ggagagggtc aggcagatct cacccttgtc agcccagggc tggaccaact caacaggcaa
     1021 ctacaactgg tcacttacag cagccgaagc taccagacca acacagcaga cacagtccgg
     1081 ttctccaccg agggacatga ggctgctttc actatccgca taagacaccc gcccaaccct
     1141 cggctgtacc cacctgggtc tctaccccag ggagcccagt acaacatcag cgctctagtc
     1201 acgattgcca ccaagacctt cctccgttat gatcggctac gggctctcat caccagtatc
     1261 cgccgcttct acccaacggt taccgtggtc atcgctgacg acagcgacaa gccagagcgc
     1321 gttagtggcc cctacgtgga acactatctc atgcccttcg gcaagggctg gttcgcaggc
     1381 cggaacctgg ccgtgtctca agtaaccacc aagtacgtgc tgtgggtgga cgacgacttc
     1441 gtcttcacgg cgcggacgcg gctggagagg cttgtggacg tgctggagcg gacgccgctg
     1501 gacctggtgg ggggcgcggt gcgcgagatc tccggctttg ccaccactta tcggcagctg
     1561 ctgagcgtgg agcccggcgc cccaggcctc gggaactgcc tccggcaaag gcgcggcttc
     1621 caccacgagc tcgtcggctt cccaggctgc gtggtcaccg acggcgtggt taacttcttc
     1681 ctggcgcgga ctgacaaggt gcgcgaggtc ggtttcgacc cccgcctcag ccgcgtggct
     1741 catctggaat tcttcttgga tgggcttggt tcccttcggg ttggctcctg ctccgacgtc
     1801 gtggtggatc atgcatccaa actgaagctg ccttggacat caagggatgc cggagcagag
     1861 acttacgccc ggtaccgtta cccaggatca ctggacgaga gccagatggc caaacaccgg
     1921 ctgctcttct tcaaacaccg gctgcagtgc atgacctccc agtgatggcc cgctggggat
     1981 ttctgactgt caggctgggc ctgcctcctt gtccctgcca ggaatttcca acaaacccca
     2041 ccaccctgtg agcactctac tggctgtccc tgagcctcta gttcctcact cttccttttc
     2101 agaacctgat gcccagtagg ggttgtcctg gtgacacccc tcctttttcc agtgcccaga
     2161 ggcctggtgg agccataacc tctcccacag ccagtgccaa gtcctccccc tgcccattct
     2221 catggggcag gaaatggggg gatcactttc caagtgccaa agagcccaga gggactctaa
     2281 gaacctaagg tggaaacact gtcctctcat cttgggaccg agggggtggg gaagttcccc
     2341 aacacataat cccaagactg tgcccctcat ctgcatcttc agatccagta ctctgtgtac
     2401 ctgctccagc cccaccccca cagagagaac ttgtggctct ggggctgggg tgagggctgg
     2461 tggttggtga aagccattct tagttgtgtc tctgcaatgc tgtgggcaca aaagaagggg
     2521 caccagagtc cctgtgcaaa cacctagact cacttcatgg attccaaagc tctcagcttc
     2581 attttattag ttacgttagg taagggggtt caagggtcat ggtcctcatc acacacatgt
     2641 catcagggcc ctctgcactc cacatgatga ggtcagaccc acacggtgca aatctttggg
     2701 tcagtgagct cctggagaag agaggagaca tgtcaggaat agattaggca cccctcttcc
     2761 ttaatgaaat gtggcagtcc tctcaggggt accccaccta cttagggatc tgagttcttc
     2821 agttcctcac ccatagctca gcccgggctc cctgatttgg tcttcaatct actattcatt
     2881 ccgtccccac ccttttcttc ttgatcttcc tcagaccctt tcccaaaccc ctctccctgg
     2941 gtctccagcc acttacccct gcctcacttg ccgcagccca gtgcctcctg gctcccgctc
     3001 ctggtgctac tgccccttaa caggctcccc agggcataag cagctgcatc ctgcacactc
     3061 acaaacagct gatctggagt caccctgtcc aggagtccta cccgggtcag tgtcccctgc
     3121 accaaggcta tgtggggagg gtgtcagact ctgagaccct aagtccacac cgggtccttt
     3181 tccctaccgc aggtgtccag tcattgccca ggcactgggc cccgctcttc tccacacatc
     3241 tcaccattac actgagccag gaggaggcgg atcctagcat ctcgacatcg gctggccagc
     3301 tgcagggatg gggcaaaggg gttaagtccc agatcagagg gtatgagtga gatgctaagg
     3361 ggtttctcct caacctaccc tctccctcac ctgcaccact tctctggccc cagcagcatc
     3421 tgcaaaggtg acaccactga agtctaggac caccaccctg acaggctcag caactagaat
     3481 gggagaagac aggagtaccc aggtgtcacc atgcaacatg cccaaatctt ccttcttgtc
     3541 accccatctc acctgcaacc attgggccat ctggctttga agtctcctat aagtaaagaa
     3601 gggcagtcac cactcccgaa acacagcatg aacatgcacc ccttgagcac aaggatcccc
     3661 ctcagaacac ccacctgcct cccactccct gaggatccac atccctccta aaccaagctc
     3721 cttcaccttt tctccttctc cgagccccag gtgccactcc aggttgcagc gaaactgccc
     3781 acgggtccca aagtacagtg gtgttggata gctcaggatg cagagccccg ggacctggag
     3841 gagctaagag gtcaaaggat cagagaaatg tctggggcta atcttccctt ccttctttgg
     3901 ctgcagccca cccaccctgg ggcttcctct gagtggtctg tagagctctg tcccctcagc
     3961 ctgtccaagt gccaggcact acaccctagg gaagaaggtg gggccagatt tccagcttag
     4021 cctggcctgg ctggagagtc accccaagca cctcattctc ttcccctgcc ccgacctcaa
     4081 ctccactcat ctctatgccc acctccgggt gcggcagacc acagtcatca tggagaagac
     4141 cacacccaca gccaggccca aatccacact cagggtcact actgccaccc aggtgaccat
     4201 ccacacagcc tgcaggatag ggataggggt ggattgccca aaagaaaagc caggccatca
     4261 ctgctgggta aagagatcca gggcagtgac taccaaggca agtgatgggg agagatgatc
     4321 caggaagaag tggaaagcat gacagaagga aacaacaggg ttgattcaat gggacacaca
     4381 ccaaatgtaa tgacccgcac cagttgggaa gttacaaata ttcaggccaa aggggttcaa
     4441 accccatcct ttcccttgcc tgtgagtaaa gcatactagg agttatgttt gctgggggag
     4501 tgggtgggtt gcagaactta agaccaggac aattaggttt ggttcagggc agaggctggg
     4561 gatgctaaca agatgagagg gggcaatctg ggggtaatgg catttctcac aaagtccact
     4621 cggctgatgt gccatagttg tggaagttcc tgcatctggc agaacacctg gcgcatgctg
     4681 gagatgttga tgcaagccag gacagccttg aggcagagga ggtgggctga ctacctcgat
     4741 gtcctggaat acagctaccc ctcccagcca tgctcatgcc tcctctgctc attaccttgg
     4801 gcagatagta aaagaagggc cccagccaca gcagcaccga caggaccact gtgcaggaga
     4861 agaggcctgc cagctagaga aaaggaggaa caggagcaaa aaaggaagag agcctcccac
     4921 ccccacatga gagctggtct tcctgcccac tctgcctaat cttcctcgga agtctccctt
     4981 ctcccaaatc tccttccaca caaccccctt cttaatattc tgccattcac atctaaccct
     5041 cccgctcccc ccaattaatt aaatgcccat tattcaccag tctccttgta gatgtccatt
     5101 gttcaagttc cccagttttg tagcccacct ccaccttaaa agccactgtt gggttaccct
     5161 ataagcaggg tatatgtgtt tagggcacca gcaaagtaag ggaaaccaaa aatattaggg
     5221 ggagactttg atatgtgata ttccttttaa aagacaatgt cattgtgtga aaaaaataag
     5281 aattttatct cttaagttta
//
