LOCUS       XM_011530179            5131 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens ARVCF delta catenin family member (ARVCF),
            transcript variant X3, mRNA.
ACCESSION   XM_011530179
VERSION     XM_011530179.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000022.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011530179.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
     gene            1..5131
                     /gene="ARVCF"
                     /note="ARVCF delta catenin family member; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 19 ESTs, 29 long SRA reads, 1 Protein, and 89%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:421"
                     /db_xref="HGNC:HGNC:728"
                     /db_xref="MIM:602269"
     CDS             308..3289
                     /gene="ARVCF"
                     /codon_start=1
                     /product="splicing regulator ARVCF isoform X3"
                     /protein_id="XP_011528481.1"
                     /db_xref="GeneID:421"
                     /db_xref="HGNC:HGNC:728"
                     /db_xref="MIM:602269"
                     /translation="MEDCNVHSAASILASVKEQEARFERLTRALEQERRHVALQLERA
                     QQPGMVSGGMGSGQPLPMAWQQLVLQEQSPGSQASLATMPEAPDVLEETVTVEEDPGT
                     PTSHVSIVTSEDGTTRRTETKVTKTVKTVTTRTVRQVPVGPDGLPLLDGGPPLGPFAD
                     GALDRHFLLRGGGPVATLSRAYLSSGGGFPEGPEPRDSPSYGSLSRGLGMRPPRAGPL
                     GPGPGDGCFTLPGHREAFPVGPEPGPPGGRSLPERFQAEPYGLEDDTRSLAADDEGGP
                     ELEPDYGTATRRRPECGRGLHTRAYEDTADDGGELADERPAFPMVTAPLAQPERGSMG
                     SLDRLVRRSPSVDSARKEPRWRDPELPEVLAMLRHPVDPVKANAAAYLQHLCFENEGV
                     KRRVRQLRGLPLLVALLDHPRAEVRRRACGALRNLSYGRDTDNKAAIRDCGGVPALVR
                     LLRAARDNEVRELVTGTLWNLSSYEPLKMVIIDHGLQTLTHEVIVPHSGWEREPNEDS
                     KPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQSAVGRKDTDNK
                     SVENCVCIMRNLSYHVHKEVPGADRYQEAEPGPLGSAVGSQRRRRDDASCFGGKKDGE
                     MDRNFDTLDLPKRTEAAKGFELLYQPEVVRLYLSLLTESRNFNTLEAAAGALQNLSAG
                     NWMWATYIRATVRKERGLPVLVELLQSETDKVVRAVAIALRNLSLDRRNKDLIGSYAM
                     AELVRNVRNAQAPPRPGACLEEDTVVAVLNTIHEIVSDSLDNARSLLQARGVPALVAL
                     VASSQSVREAKAASHVLQTVWSYKELRGTLQKDGWTKARFQSAAATAKGPKGALSPGG
                     FDDSTLPLVDKSLEGEKTGSRDVIPMDALGPDGYSTVDRRERRPRGASSAGEASEKEP
                     LKGYRRRQRTERHQTTAPARVKQERRREGQKGAWVTFGGCQGPTPLRNWSRGERRQHL
                     SCLSPDTASLLPATQTTWRTG"
     polyA_site      5131
                     /gene="ARVCF"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcgcacgggc cgcgtgaggg cgggagggct ggcccggggt ctcgggttgc gcgctgggcc
       61 tggagggagg gggcggcccc cgcaccggtc cgagttgcgg ccgcgtggac tgcgacccgc
      121 gccgcgccgc accgcgccgc gccctgggaa cgccgctccc cgcgcgccaa cggacccggg
      181 gaagcccttc tggggtccga ggccgcgctg cggggccgcc cacgctgcgc tccaggagcc
      241 agagcctgca gggtgggtgt cgggacatgc tgatcttccc tcaagacagc tggcgggcgc
      301 tctggtcatg gaggactgca atgtgcactc ggccgccagc atcctggcct cggtgaagga
      361 gcaggaggcc cgcttcgaga ggctgacacg ggcactggag caggagcggc gccatgttgc
      421 cctacagctg gagcgtgccc agcagcctgg catggtcagt ggtggcatgg gcagtgggca
      481 gcccctgcca atggcctggc aacagctggt cctccaggag cagagcccag gcagccaggc
      541 ctcactggcc acgatgccgg aggcacctga tgtgctggag gagaccgtga cggtggagga
      601 ggaccccggc acacccactt cccatgtgtc tattgtcaca tccgaagatg gcacaacccg
      661 gcgcaccgag accaaggtca ccaagactgt caagacggtg accactcgga cagtacgcca
      721 ggtgcccgtg ggcccagatg gactccccct gctggatggc ggccccccac taggcccttt
      781 tgcagatggt gccctggacc ggcatttcct gctgcgtggt ggtggcccag tggccacact
      841 ctctcgagcc tacctcagca gtgggggtgg ctttcccgaa ggccccgagc cccgggacag
      901 ccccagctat ggcagcctgt cccgagggct gggcatgcgg cccccacgtg ctggccccct
      961 tggcccaggc cctggtgatg gctgcttcac actgcctggc caccgggaag ccttcccggt
     1021 gggtcctgag cctgggccac caggtggccg ctccctgccc gagcgcttcc aggcagagcc
     1081 gtatggcttg gaggatgaca cgcgcagcct ggccgctgat gacgagggtg gccctgagct
     1141 ggagcctgac tatggcacgg ccacaaggag gaggcctgag tgtgggcggg gccttcatac
     1201 cagggcctac gaggacacag cagatgatgg cggcgagctg gcggacgagc ggcctgcgtt
     1261 cccaatggtg acggcgcccc tggcccagcc tgaacggggc agcatgggca gcctggaccg
     1321 gctggtgcgg cgctcgccct cagtggatag cgcccgcaag gagccgcgct ggcgggaccc
     1381 tgagctgcct gaggtgctgg ccatgctgcg gcaccccgtg gaccccgtga aggccaatgc
     1441 ggccgcctac ctgcagcatc tgtgctttga gaacgagggt gtcaagcggc gtgtacggca
     1501 gttgcggggg ctgccgctgc ttgtggcact gctggaccac ccgcgggctg aggtgcggcg
     1561 ccgggcctgt ggggcactgc gcaacctctc ctatggccgc gacactgaca acaaggccgc
     1621 catccgggac tgcggtggtg tgcctgccct ggtgcgcctg ctgagggctg cccgggacaa
     1681 cgaggtccgt gagcttgtca ctggcaccct gtggaacctg tcatcctatg agcccctgaa
     1741 gatggtcatc attgaccatg gcctgcagac gctgacccac gaggtgatcg tgccccactc
     1801 aggatgggag cgtgagccca acgaggactc caagccacgg gacgccgagt ggacaactgt
     1861 cttcaagaac acgtcgggct gcctgaggaa tgtgagctcc gatggtgctg aggcccggcg
     1921 gcgactccgg gagtgtgaag ggctggtgga cgcgctcctg catgccctgc agtcggctgt
     1981 gggccggaag gacactgaca acaagtcggt ggagaactgc gtgtgcatca tgcggaacct
     2041 gtcctaccac gtgcacaagg aggtgcccgg ggccgacagg taccaggagg ccgagcccgg
     2101 gcccctgggc agtgctgtag gctcccagcg ccggaggcgg gatgatgcca gctgctttgg
     2161 aggaaagaag gatggtgaga tggaccggaa ctttgacacg ctagacctgc ccaagcgaac
     2221 tgaggccgcc aaaggctttg agctgctgta ccagcccgag gtggtacgtc tctacctctc
     2281 cctcctcacg gagagccgga acttcaacac cctggaggct gccgccggcg ctctgcagaa
     2341 cctcagtgcc ggcaactgga tgtgggccac gtacatccgc gccacagtgc gcaaagagcg
     2401 cgggctgccg gtgcttgtgg aactgctgca gtctgagacc gacaaggtgg tgcgcgccgt
     2461 cgccatcgct ctgcgcaacc tctcgctgga ccggcgcaac aaagacctca tcgggagcta
     2521 cgccatggct gagcttgtgc ggaatgtgcg caatgcacag gctccgccgc gaccgggggc
     2581 ctgcctggag gaagacaccg tggtggcggt gctcaacacc atccacgaaa tcgtgtccga
     2641 cagcctggat aacgcgcgct cgctcctgca ggcacgcggg gtgccagcgt tggtggctct
     2701 cgtggcctcc agccaatcgg tacgcgaagc gaaggcggcg tcacacgtgc tgcagacagt
     2761 gtggagctac aaggagctgc gtggtacctt gcagaaagat ggttggacca aggcgcgctt
     2821 ccagtcagct gctgctactg ccaaggggcc taagggagca ctgagtcctg ggggcttcga
     2881 tgacagcacg ctgccactgg tggacaagag ccttgagggc gagaaaactg gcagccggga
     2941 tgtgatcccc atggatgcgc tgggcccaga cggatactcc acggtggacc ggagggagcg
     3001 gaggccacgg ggcgccagct ctgcaggaga ggcctctgag aaggaaccct tgaaaggata
     3061 cagaagacgt cagcggactg aaagacacca gaccactgca cctgcacgag ttaaacagga
     3121 aagaaggagg gaagggcaga aaggagcatg ggtcaccttt ggaggctgcc aggggcccac
     3181 tcctttacga aactggtcaa gaggggaaag aaggcagcac ctgtcctgcc tgtcgcccga
     3241 cactgcaagc ctcctaccag ctactcagac cacctggaga actggctaaa catgcatcag
     3301 cgtctgagca ggactgaaaa tctaatgccg tggagaagcg acagtgtcag aggagcaggt
     3361 gacactatgc tgaggtggtt ttcatctggc ccaccctcct tagactctcc tcccttcaag
     3421 agttggagcc tcacagaggt tgcagggagc caagatcgcg ccactgcact ccagcctggg
     3481 cgacagagcg agagactgtc tcgagaaaca acaacaaaaa gttggagcct cagaccaagc
     3541 acacacctgt actcccagca ctttgggagg ttgaggcaag aggatcgctt gaggccagga
     3601 gtttgagacc agtctgggca acatagggag accccatttc tacaaaaaat ttttaaatta
     3661 gccaggtgta gtggtgcatg cctttagtcc tagctactca ggaggctgag gtgggaggat
     3721 cactggagct caggagtttg aggctacagt gagctatgat gtcatcactg cactccagcc
     3781 tgggcacaga gcaagactct gtctttttct tttttttttt ttttttttaa gggggaactc
     3841 attcctcttc ctttgggcat gggctggact tggtgactac agcagcccgg tggagaggcc
     3901 tcctcaaagc agcccttgat tttgaattgc aacctgctcc tgagcccctc acccctcgtg
     3961 cctccgatgc tcacagaacc cactgagggg atggctagac cctcacaaga gccaggttgt
     4021 cccctaaccc tccacaaggg ggcacagggc cccagccctg agtgtgcaga tgtgcgttta
     4081 acaaggacac ccattcccaa ttcatgactt cccacttcat gactttgctt cttttgagat
     4141 aattaccagc tttgcgcaag cagcactgag aaaactatta gtttcctagt tactaaactg
     4201 caatgtttgc tacttttcta tgaaggcagg cccctgtaat tagcacccac atcacagctg
     4261 ctgaaactcg gccgcagtaa cgcaggccca gctgtgggtg tctttcctgc ccaagtgaag
     4321 cccatctggc tgagtgccag ctctctgcca tcaataccca attgccagca tcatgctcct
     4381 ttgtcagggg tgagcccccc tccagctacc ctgtcttggc ctgtaggtct ccctcccacc
     4441 ctcccaatgc ccaccccctt ggccactaca ggtcctccct ctccacggcc agggttcagt
     4501 gcctcctcgt gagttcaggg catctgaaat gccctcccca cagccctctc cacactccac
     4561 aaggctgaca gggatctttc cagaaaagtt tttgttgttt tttgttgttt tgaaagctgg
     4621 aatacggccg gacgcagtgg ctcacgcctg taatcccagc actttgggag gccgaggcgg
     4681 gcggatcacg aagtcaggat attgagacca tcctggccaa tgtggtgaaa ccccatctct
     4741 actaaactac aaaaaactag ccgggtgtgg cagcgcgcgc ctgtagtccc agctactcag
     4801 gaggctaagg cagggtaatc gcttgaaccc aagaggtgga ggttgcagtg agccgtgatc
     4861 gtgccactgc actccagcct ggtgacagag caagactcca tctaaaatat atatatatat
     4921 tttttctttt gccatgttgc ccaggctggt ctcgaactct cctggcctca agcgctcctc
     4981 ctgccgtagc ctcccaaagt gcaagggtta caggcatgag cccctgagcc cagctccaga
     5041 agacaggtct aacctcatcc tcacctgccc aaagtcctgt gtgccctgac tcccattgtt
     5101 cctggaacat tctctgccct ttcacacctc a
//
