LOCUS       NM_001143968             941 bp    mRNA    linear   PRI 19-SEP-2024
DEFINITION  Homo sapiens ARF like GTPase 5C (ARL5C), mRNA.
ACCESSION   NM_001143968 XM_001720152 XM_001722887 XM_001725609
VERSION     NM_001143968.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Zody,M.C., Garber,M., Adams,D.J., Sharpe,T., Harrow,J.,
            Lupski,J.R., Nicholson,C., Searle,S.M., Wilming,L., Young,S.K.,
            Abouelleil,A., Allen,N.R., Bi,W., Bloom,T., Borowsky,M.L.,
            Bugalter,B.E., Butler,J., Chang,J.L., Chen,C.K., Cook,A., Corum,B.,
            Cuomo,C.A., de Jong,P.J., DeCaprio,D., Dewar,K., FitzGerald,M.,
            Gilbert,J., Gibson,R., Gnerre,S., Goldstein,S., Grafham,D.V.,
            Grocock,R., Hafez,N., Hagopian,D.S., Hart,E., Norman,C.H.,
            Humphray,S., Jaffe,D.B., Jones,M., Kamal,M., Khodiyar,V.K.,
            LaButti,K., Laird,G., Lehoczky,J., Liu,X., Lokyitsang,T.,
            Loveland,J., Lui,A., Macdonald,P., Major,J.E., Matthews,L.,
            Mauceli,E., McCarroll,S.A., Mihalev,A.H., Mudge,J., Nguyen,C.,
            Nicol,R., O'Leary,S.B., Osoegawa,K., Schwartz,D.C., Shaw-Smith,C.,
            Stankiewicz,P., Steward,C., Swarbreck,D., Venkataraman,V.,
            Whittaker,C.A., Yang,X., Zimmer,A.R., Bradley,A., Hubbard,T.,
            Birren,B.W., Rogers,J., Lander,E.S. and Nusbaum,C.
  TITLE     DNA sequence of human chromosome 17 and analysis of rearrangement
            in the human lineage
  JOURNAL   Nature 440 (7087), 1045-1049 (2006)
   PUBMED   16625196
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC004408.2.
            
            On or before Jan 24, 2009 this sequence version replaced
            XM_001725609.1, XM_001720152.1, XM_001722887.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000269586.12/ ENSP00000269586.7
            RefSeq Select criteria    :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-447               AC004408.2         64719-65165         c
            448-508             AC004408.2         64083-64143         c
            509-656             AC004408.2         61715-61862         c
            657-740             AC004408.2         60272-60355         c
            741-892             AC004408.2         59595-59746         c
            893-941             AC004408.2         55898-55946         c
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17q12"
     gene            1..941
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /note="ARF like GTPase 5C"
                     /db_xref="GeneID:390790"
                     /db_xref="HGNC:HGNC:31111"
     exon            1..447
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /inference="alignment:Splign:2.1.0"
     CDS             402..941
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /note="ADP-ribosylation factor-like protein 12;
                     ADP-ribosylation factor-like 5C; ADP ribosylation factor
                     like GTPase 5C"
                     /codon_start=1
                     /product="putative ADP-ribosylation factor-like protein
                     5C"
                     /protein_id="NP_001137440.1"
                     /db_xref="CCDS:CCDS45664.1"
                     /db_xref="GeneID:390790"
                     /db_xref="HGNC:HGNC:31111"
                     /translation="MGQLIAKLMSIFGNQEHTVIIVGLDNEGKTTILYRFLTNEVVHM
                     CPTIGSNVEEIILPKTHFFMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTT
                     REELYKMLAHEALQDASVLIFANKQDVKDSMRMVEISHFLTLSTIKDHSWHIQGCCAL
                     TREGLPARLQWMESQAAAN"
     exon            448..508
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /inference="alignment:Splign:2.1.0"
     exon            509..656
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /inference="alignment:Splign:2.1.0"
     exon            657..740
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /inference="alignment:Splign:2.1.0"
     exon            741..892
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /inference="alignment:Splign:2.1.0"
     exon            893..941
                     /gene="ARL5C"
                     /gene_synonym="ARL12"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtctagtgc cctagacatg gcactcagag gagggagagc tgggatccgg ttccgcgcgc
       61 agtgctgagt ctcccctgat ttgcggtagt ggagcagtcc acccggagaa ctcaggagtt
      121 ttcgcagggc gagggggagg gctggagcct ggaaccccca tattccttgc acctcttggg
      181 cccgggacag gcagccctta gtcactgggg tgtccatagt gcccacgaag ggccagcgtc
      241 ccagagggtt cccaggtcag gttggtgacg tgtggggctt ccctaacttc gtaggcaaaa
      301 tctgccagac cctcccgggg gagcggagct ccgaatacca gggccgactc cgctcctgag
      361 gccgctgagc cctcctgcac ctgtccggcc cgggaagtgc catgggacag ctgatcgcca
      421 agttaatgag catcttcggg aaccaggagc acacggtcat catcgtggga ctggacaatg
      481 aaggaaagac caccattctc taccggttct tgaccaatga ggtggtccat atgtgtccca
      541 ccattggcag caacgtggag gagatcattc tgccgaagac ccacttcttc atgtgggaca
      601 tagtgagacc tgaggctctg agctttatct ggaacacata ctactccaac actgagttta
      661 tcatccttgt gattgacagc acggaccggg atcggctgct gaccactcgg gaggagctat
      721 ataaaatgct ggcccatgag gctctacagg atgcttcagt cctgatattt gccaataagc
      781 aggacgtgaa ggactccatg aggatggtgg agatctccca tttccttact ctcagcacca
      841 tcaaagacca ctcgtggcat atacaaggct gctgtgccct caccagggaa gggctgcctg
      901 ccagacttca gtggatggaa tctcaggccg ctgctaactg a
//
