LOCUS       NM_001113738            5242 bp    mRNA    linear   PRI 19-SEP-2024
DEFINITION  Homo sapiens ARF like GTPase 17A (ARL17A), transcript variant 1,
            mRNA.
ACCESSION   NM_001113738
VERSION     NM_001113738.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5242)
  AUTHORS   Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
            Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
            Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
            Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
            Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
            Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
            Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
            Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
            Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
            Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
            Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S., Watanabe,S.,
            Yosida,M., Hotuta,T., Kusano,J., Kanehori,K., Takahashi-Fujii,A.,
            Hara,H., Tanase,T.O., Nomura,Y., Togiya,S., Komai,F., Hara,R.,
            Takeuchi,K., Arita,M., Imose,N., Musashino,K., Yuuki,H., Oshima,A.,
            Sasaki,N., Aotsuka,S., Yoshikawa,Y., Matsunawa,H., Ichihara,T.,
            Shiohata,N., Sano,S., Moriya,S., Momiyama,H., Satoh,N., Takami,S.,
            Terashima,Y., Suzuki,O., Nakagawa,S., Senoh,A., Mizoguchi,H.,
            Goto,Y., Shimizu,F., Wakebe,H., Hishigaki,H., Watanabe,T.,
            Sugiyama,A., Takemoto,M., Kawakami,B., Yamazaki,M., Watanabe,K.,
            Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M.,
            Tashiro,H., Tanigami,A., Fujiwara,T., Ono,T., Yamada,K., Fujii,Y.,
            Ozaki,K., Hirao,M., Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N.,
            Inagaki,H., Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T.,
            Noguchi,S., Itoh,T., Shigeta,K., Senba,T., Matsumura,K.,
            Nakajima,Y., Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T.,
            Oyama,M., Hata,H., Watanabe,M., Komatsu,T., Mizushima-Sugano,J.,
            Satoh,T., Shirai,Y., Takahashi,Y., Nakagawa,K., Okumura,K.,
            Nagase,T., Nomura,N., Kikuchi,H., Masuho,Y., Yamashita,R.,
            Nakai,K., Yada,T., Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
  TITLE     Complete sequencing and characterization of 21,243 full-length
            human cDNAs
  JOURNAL   Nat Genet 36 (1), 40-45 (2004)
   PUBMED   14702039
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138645.3 and AB209344.1.
            
            On Dec 3, 2019 this sequence version replaced NM_001113738.1.
            
            Transcript Variant: This variant (1) encodes isoform (a).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            transcript and genomic sequence to make the sequence consistent
            with the reference genome assembly. The genomic coordinates used
            for the transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB209344.1, BX647266.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1966682
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000336125.6/ ENSP00000337478.6
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-38                AC138645.3         119120-119157       c
            39-1497             AB209344.1         1-1459
            1498-5242           AC138645.3         92222-95966         c
FEATURES             Location/Qualifiers
     source          1..5242
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17q21.31"
     gene            1..5242
                     /gene="ARL17A"
                     /gene_synonym="ARF1P2; ARL17P1"
                     /note="ARF like GTPase 17A"
                     /db_xref="GeneID:51326"
                     /db_xref="HGNC:HGNC:24096"
     exon            1..91
                     /gene="ARL17A"
                     /gene_synonym="ARF1P2; ARL17P1"
                     /inference="alignment:Splign:2.1.0"
     exon            92..256
                     /gene="ARL17A"
                     /gene_synonym="ARF1P2; ARL17P1"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..642
                     /gene="ARL17A"
                     /gene_synonym="ARF1P2; ARL17P1"
                     /note="isoform a is encoded by transcript variant 1;
                     ADP-ribosylation factor 7; ADP-ribosylation factor-like
                     17-like; ADP ribosylation factor like GTPase 17A"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like 17-like isoform a"
                     /protein_id="NP_001107210.1"
                     /db_xref="CCDS:CCDS45718.1"
                     /db_xref="GeneID:51326"
                     /db_xref="HGNC:HGNC:24096"
                     /translation="MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVP
                     AVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKGARSPGSTHQGSLASG
                     VLPIKCSHVEFGMWKGGRSHPFLPHSSRCAGSGGQLDSILPHQSPAWGPWGCKDLSSG
                     FPSFLTSSILWKSAVVK"
     exon            257..367
                     /gene="ARL17A"
                     /gene_synonym="ARF1P2; ARL17P1"
                     /inference="alignment:Splign:2.1.0"
     exon            368..5242
                     /gene="ARL17A"
                     /gene_synonym="ARF1P2; ARL17P1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acgcctgtcg tggtttagct gaactgagct gaaatcctaa aggccgcgga gtcggcggtg
       61 ttgtaggtag cggtaccttg agtggcaaca gaattcgatt aaattacaat gggaaacatt
      121 tttgaaaagc tctttaaaag tctacttggg aaaaaaaaga tgcggattct tatattgagt
      181 ttggatacag ctggaaaaac caccatcttg tataaattga agctggggga gactgtgcct
      241 gccgtcccta cagtaggttt ctgtgtggag acagtagaat ataaaaataa caccttcgct
      301 gtctgggatg ttggcagcca cttcaaaatc agacctctgt ggcagcattt tttccagaac
      361 acaaaaggtg ccagaagccc aggaagcaca catcaaggct cacttgccag cggggtgctg
      421 ccaataaaat gtagtcacgt ggaatttgga atgtggaaag gaggtagaag tcatcctttc
      481 ctcccccata gcagcaggtg tgcaggctct ggtggtcagc tggactccat actcccccac
      541 cagtcaccag cctggggacc gtggggctgc aaggacctca gcagcggttt cccaagtttc
      601 ctgacttctt ccatcctctg gaaatcagct gtggtaaagt agcctgaaag ccagtggtgc
      661 aaccccatcc ccacaacctt caccacctct agcacctcca gtgataagca ctaattgcct
      721 atatacaacc cttttttgtt tgaaatatct agagtaattt ctgttttcct atctggggta
      781 gtgtaacata agaagaaata tatatttggt ctctgccccc agttcctaac acaaagctcc
      841 taaaaccctt ggaaattcct gaatgatggc ggtgctaaga gcattgtcct ttgttaattt
      901 atcatttttc ttttctccta ggtgtttttt cctttttaaa cttttctttt aggttagggg
      961 gtacatatgc acgttcgtta tatagctaaa cttgtgtcat gggggtttgt tgtacagatt
     1021 atttcatcac ccaggtacca agcctagtac ccaatagttt tttctgctcc tctccctcct
     1081 cccaccctcc accctcaggt agggcccagt gtctgttgtt tatgagttct catcattttg
     1141 ctcccactta aaagaacata cagtatttgg ttttctgttc ctgtcttagt ttgctgagga
     1201 taatggcctc tagctccatc tgtgttcctg caaaagacat gatctcgctg ttttttatgg
     1261 ttgcacatct tttgttctaa catttggtcc ttaaacctgg ttcctgacac agagctccta
     1321 aatcccttgg aattttctgg gtgatagaag cgtcctttgt tctcatgagg tgactcttgg
     1381 tgggctcctt atttggggac tggtcaccaa aaagacctat ggttggaagc gttgtgctgt
     1441 cagccccatt ccccatcctc tggcgtgggg agtagagctg gagctcaatc atgcctacgt
     1501 gataaagcct ccagaaaact ccttaaaaga caggacttgg agagcttccg ggttggcgaa
     1561 cacatccatg ttccaggaga gtggtgcacc ccaactccac aaggaccctt ccaaacctca
     1621 ccctgtgtat ctcttcaact ggcttcatca tttgtgtcct ttaaaatatc ctttgtaata
     1681 aatcagcact agtaagaaaa ctgttttcct gggttccatg agctgttcta gcaaatgttc
     1741 aaacctgagg agggagttgt ggggacctcc aatttacagc cagttggtca gatgcatagg
     1801 tgatgcttgg ccttgcacct ggggtctgac atgcggatgg tcctgtgtga ctgagccctt
     1861 aacctgtgga gtctggtgct cactctgctt agggcttctc ttgccttttt agtgtccttc
     1921 taggcggcct ttccttcctc ttgtcagctc agaaaacttt tcttccactt cccttcttct
     1981 aaaccatccc ttacatctac tcctttccag ccgaccaaga gcagaaccac ggctggttcc
     2041 actgccacca tgctgtccca cactgtctcc tcaggatgta ttcagatgtc cagccctccc
     2101 cccagtctag gagccccccc tttgaggaaa gggatgctgg cctagtcaac tctttcccag
     2161 caccaggtac agcatctggc acgttccatc tttttcatgg actctcccca ggcggcctga
     2221 ccttccctcc tctgaaccgg tgcatttctt gtctgcatca tgtttgccct aatcagatat
     2281 caccttattt cctcttttaa aaaatgcttt gtttctctgg caggcttcat cggaatcaca
     2341 attttcattc atttagtaac tgttgttgtt tattctatgt atttttgcag gaggcctgag
     2401 gtgggctgtg ttctcctcct atggcagggc ttcactctcc tcctcctccg ttggggcttc
     2461 gctgtccctg ggataagaat aacaatgcca aggttttcat tcttgaaagg agcaattaag
     2521 cttctcaccc cctcctcatt ttagatggga actgtgaggg ccccatcatt tacccagggt
     2581 ccctgttgag gatcttgtcc tcattagatg acttcttgtg cagcttccat gcatgattat
     2641 ttattcttgt ggcactgaga ggtttgtaca tatctttaaa ccagagcggc tgtccaaatg
     2701 aggaaagtcc atcctagaag atagaaaggg aaatattaat tttgcatgtc ctctgctttc
     2761 cctggccaca gcaatgaatc ctccaatgta cctgactctc ccttcgcgaa gagcatcccc
     2821 tccatggcag aaatctgaaa atgcccctgg ggagacacat gcacaagaca gtgagtgatg
     2881 cagccgtttc ccacgtatct cacaatgtac ttctctggtc ttattaggac taaatgagta
     2941 tctcagtcca taatcacagg gagaaccacc accacagacc acatacccgg ggtcttgaaa
     3001 ataattccat gcatgtggga ctttcagaag ctctccatgt ctgcccagaa gggccccaca
     3061 atatactggg gggactttgt atgtggctca gcatggagca ggggcaggat tttcagtccc
     3121 actcactccc ttggccaagt gcccttgtgc agtgaacaaa ctgcacaacc atgctgggca
     3181 gaagcatttt atatcagtcc ccttcggact tagtctcaca ggcatcattt gatgggggat
     3241 gggagatgaa gtggttcttc gttttctaga tactttattc tataagttgg atcacctcaa
     3301 gcaaatgcgt gagtgcagct agccaagttc tctatctcac agtcttcata tggctggctg
     3361 tcgctgatga gtgagtgagc tacgaaatca gcttaaagca caacatgtta tttttgaatt
     3421 tgaataaaat aggaaaaggc agagtgcatt gtgtgaccat ggggtaagta agacactctc
     3481 cctttctcct tctcagtttt cctgtcataa aaggacaaac tactatctaa ggtctccgta
     3541 gttaaaattc ttttttgttg tttttttttt atttgagaca gtttggctca ttccccaggc
     3601 tggagtgcaa tggtgctatc ttggctccct gcaacctgcg cctcctgggc tcaagcagtt
     3661 ctcctgcctc agcctcccaa gtagctggga ttacacgcct gcgccaccac acccagctaa
     3721 tttagtattt ttagtagaga tggggtttca ccatgttggt caggctggtc acgagctcct
     3781 aacctcaagt gatcccaaag tgctgtgatt acaggcgtga gccatcctgc ctggcctttc
     3841 tggttaaaat tctgtgaggt ttgcataaaa ggaatagagt aggggcccaa aaaccagtaa
     3901 gatgagaaaa tagtgtttcc tcagttctag gatccagggg aaaaaaaaaa gaaataaaag
     3961 agaaaatact gtttcctgcc acttaagagg aaggactcac atatcctacc ttccatcagc
     4021 cttgaaggag acaagtgccc tctctctcac acccggtggc cttcccttcc cctttcccag
     4081 agcctccaag aaggcccctg gcctggcctg atgcccacca tcagcagcaa taggcaccaa
     4141 aacctttctc cttcctatcc ctccccacct cccgaaaggg ctggggacag caggtgtgtc
     4201 cttgttagtt ccatccagct cagctttggc tggggagcta atttcactgg agccaggcta
     4261 agcattaggg taagtatttg tcctgtcttg ggcagtttcc tcactgaaaa atgagggcag
     4321 agttctaagc cctcctctaa ttctaaaatt ctaattaaaa cgtcgcgaga ctagtggtgc
     4381 atgcctgtaa tcccagctac tcgggaggct gaggcaggag aatcgcttga acctgggaag
     4441 tggaggttgc cgtgagccga gatcgtgtca ttgcactcca gcctggcaac aagagggaaa
     4501 ctccgtctca aaagagaaga aaaaaaaaat caccagacta atatttacct tgagaatcct
     4561 tcttcatctt cttgtaatga ccttcggtga caacatatct gttttagaag aaaacgcaat
     4621 taagattatc tatgacaaca accaccgtct ccaaatctgt attgattcct tttattcatt
     4681 ataagtctca tctacctgat gaggtaactt ttttgaagac aggaattgta tgctgtgtaa
     4741 cactgctttg attcttccat agttcagtca tccttgctat cttgcggggg attggttcta
     4801 ggataccgcc cccacaccat accagaatct gtggatgctc aatcccttac atataatggt
     4861 gtaatatttg cttataacca acacgcatcc cccctatact ttatttactt agcgacagga
     4921 ttgccctctg ttgcttacgc tggagtgcag tgtcatcctc tgttactcag gatggagtgc
     4981 ggtgtcacga tcacagctca ctgtagcctc aacctcctgg gctccagtga tccgcccacc
     5041 tcagcctctt gagtagctga gactacaggt gcatactacc acacctggct attttttttt
     5101 ttaattttta ataaagacaa ggtctcacta tgctgcccag gttggcctcc caatgtgttg
     5161 ggattacaag tgtgagccac catgcctggc cccatgtaat ttaagtcatc actaataaaa
     5221 tgtatacata ttgtacattg tt
//
