LOCUS       NM_001358416            1564 bp    mRNA    linear   PRI 01-JUN-2024
DEFINITION  Homo sapiens ankyrin repeat domain 30B like (ANKRD30BL), transcript
            variant 3, mRNA.
ACCESSION   NM_001358416
VERSION     NM_001358416.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Parmigiani,R.B., Bettoni,F., Vibranovski,M.D., Lopes,M.H.,
            Martins,W.K., Cunha,I.W., Soares,F.A., Simpson,A.J., de Souza,S.J.
            and Camargo,A.A.
  TITLE     Characterization of a cancer/testis (CT) antigen gene family
            capable of eliciting humoral response in cancer patients
  JOURNAL   Proc Natl Acad Sci U S A 103 (48), 18066-18071 (2006)
   PUBMED   17114284
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Sogayar,M.C., Camargo,A.A., Bettoni,F., Carraro,D.M., Pires,L.C.,
            Parmigiani,R.B., Ferreira,E.N., de Sa Moreira,E., do Rosario D de O
            Latorre,M., Simpson,A.J., Cruz,L.O., Degaki,T.L., Festa,F.,
            Massirer,K.B., Sogayar,M.C., Filho,F.C., Camargo,L.P., Cunha,M.A.,
            De Souza,S.J., Faria,M. Jr., Giuliatti,S., Kopp,L., de
            Oliveira,P.S., Paiva,P.B., Pereira,A.A., Pinheiro,D.G., Puga,R.D.,
            S de Souza,J.E., Albuquerque,D.M., Andrade,L.E., Baia,G.S.,
            Briones,M.R., Cavaleiro-Luna,A.M., Cerutti,J.M., Costa,F.F.,
            Costanzi-Strauss,E., Espreafico,E.M., Ferrasi,A.C., Ferro,E.S.,
            Fortes,M.A., Furchi,J.R., Giannella-Neto,D., Goldman,G.H.,
            Goldman,M.H., Gruber,A., Guimaraes,G.S., Hackel,C.,
            Henrique-Silva,F., Kimura,E.T., Leoni,S.G., Macedo,C., Malnic,B.,
            Manzini,B. CV, Marie,S.K., Martinez-Rossi,N.M., Menossi,M.,
            Miracca,E.C., Nagai,M.A., Nobrega,F.G., Nobrega,M.P.,
            Oba-Shinjo,S.M., Oliveira,M.K., Orabona,G.M., Otsuka,A.Y.,
            Paco-Larson,M.L., Paixao,B.M., Pandolfi,J.R., Pardini,M.I., Passos
            Bueno,M.R., Passos,G.A., Pesquero,J.B., Pessoa,J.G., Rahal,P.,
            Rainho,C.A., Reis,C.P., Ricca,T.I., Rodrigues,V., Rogatto,S.R.,
            Romano,C.M., Romeiro,J.G., Rossi,A., Sa,R.G., Sales,M.M.,
            Sant'Anna,S.C., Santarosa,P.L., Segato,F., Silva,W.A. Jr.,
            Silva,I.D., Silva,N.P., Soares-Costa,A., Sonati,M.F., Strauss,B.E.,
            Tajara,E.H., Valentini,S.R., Villanova,F.E., Ward,L.S. and
            Zanette,D.L.
  CONSRTM   Ludwig-FAPESP Transcript Finishing Initiative
  TITLE     A transcript finishing initiative for closing gaps in the human
            transcriptome
  JOURNAL   Genome Res 14 (7), 1413-1423 (2004)
   PUBMED   15197164
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC098826.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189667.193571.1,
                                           SRR5189667.407972.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000409867.6/ ENSP00000386398.1
            RefSeq Select criteria :: based on manual assertion, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-465               AC098826.4         84765-85229         c
            466-580             AC098826.4         80586-80700         c
            581-754             AC098826.4         80250-80423         c
            755-861             AC098826.4         77939-78045         c
            862-926             AC098826.4         74189-74253         c
            927-1564            AC098826.4         70868-71505         c
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2q21.2"
     gene            1..1564
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /note="ankyrin repeat domain 30B like"
                     /db_xref="GeneID:554226"
                     /db_xref="HGNC:HGNC:35167"
     exon            1..465
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /inference="alignment:Splign:2.1.0"
     CDS             248..1024
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /note="ankyrin repeat domain 30B pseudogene 3"
                     /codon_start=1
                     /product="putative ankyrin repeat domain-containing
                     protein 30B-like"
                     /protein_id="NP_001345345.1"
                     /db_xref="CCDS:CCDS86883.1"
                     /db_xref="GeneID:554226"
                     /db_xref="HGNC:HGNC:35167"
                     /translation="MERLSAAPVKGQTGPERPSPFSQLVYTNNDSYVIHHGDLRKIHK
                     AASRGQAWKLERMMKKTTMDLNIRDAKKRTALYWACANGHAEVVTLLVDRKCQLDVLD
                     GENRTILMKALQCQREACANILIDSGADPNIVDVYGNTAVHYAVNSENLSVVAKLLSC
                     GADIEVKNKAGHTPLLLAIRKRSEEIVEFLLTKNANANAVDKFKCVHQQLLEYKQKIS
                     KNSQNSNPEGTSEGTPDEAAPLAERTPDTAESLVERTPDE"
     exon            466..580
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /inference="alignment:Splign:2.1.0"
     exon            581..754
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /inference="alignment:Splign:2.1.0"
     exon            755..861
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /inference="alignment:Splign:2.1.0"
     exon            862..926
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /inference="alignment:Splign:2.1.0"
     exon            927..1564
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1220..1225
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /note="hexamer: ATTAAA"
     polyA_site      1246
                     /gene="ANKRD30BL"
                     /gene_synonym="ANKRD30BP3; NCRNA00164"
                     /note="major polyA site"
ORIGIN      
        1 taacggttct gctcagctgc ctaaaggttc tgctcaggtg cctaacggtt ctgctcagct
       61 gcctaacggt tttgcgcagc cattttctcc cgggagaggt tggagtgtcc aaaagcttgg
      121 cccgactgag atttctagtc ttgtcagggc ggatgcaggg actgaagaag ggcgagggcg
      181 agcggcgggg actggggaag ggcgagcagc gggaggcacg ggctctctct agcaggtggc
      241 tgcagccatg gagaggctct ctgccgcccc tgtcaagggc cagacgggcc cagagcgccc
      301 gagccccttc agtcagctgg tctacaccaa caacgactct tacgtgattc accatgggga
      361 tctcaggaag atccacaaag ctgcctcccg gggccaagcc tggaagctgg agaggatgat
      421 gaagaagacg acaatggacc tgaacataag agatgcgaag aagaggactg ctctatactg
      481 ggcctgtgcc aatggccatg cagaagtagt aacacttctg gtagatagaa agtgtcagct
      541 tgacgtcctt gatggtgaaa acaggaccat tctgatgaag gctctgcaat gccagaggga
      601 ggcttgtgca aatattctca tagattctgg tgctgatcca aatattgtag atgtgtatgg
      661 caacacagct gtccattatg ctgttaacag tgagaatttg tcagtggtgg caaaattgct
      721 gtcctgtggt gcagacatcg aagtgaagaa caaggctggc cacacaccac ttttactggc
      781 cataaggaaa agaagtgagg aaattgtgga atttttactg acaaaaaatg caaatgcaaa
      841 tgcagttgat aagtttaaat gcgttcatca acaacttttg gaatataaac aaaagatatc
      901 taaaaattct caaaatagta atccagaagg aacatctgaa ggaacacctg atgaggctgc
      961 acccttggcg gaaagaacac ctgacacggc tgaaagcttg gtggaaagaa cacctgatga
     1021 ataggataca gtgaattcct cttcaaagat tttagcctgt aaacatcctt taaaattcaa
     1081 gagggggaag attaagtaca atgagttctg agttcctcat caaagaacaa atatgtcagt
     1141 atgttcagct tctctgttct ttgttctccg ttttaaagtt taacttcctc gttcgttatg
     1201 cctccttgcc cctagtttca ttaaacagcc cccttctagc ctctaacacc tgctttgtct
     1261 ttagtcattc ttagtaacct gctctgtcct tagtcatcct tagacacctg ctctgtaact
     1321 gtctttcccg ctgaaactac tcaccctgcc actccagctc atacccctgc cctctttaaa
     1381 tagccaatct gaattggctt agagtgtgca gtccaaccct atccaatagg gaaaagacac
     1441 aacagtaggg actagctgcg ttagaaataa gaacactttc ccctcccttg tccggtgtga
     1501 tcttgccatt gctccatctg caagaccact cttccataga agtaaatttg ccttgctgta
     1561 aaaa
//
