LOCUS       NM_001190810            2387 bp    mRNA    linear   PRI 01-JUN-2024
DEFINITION  Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH
            domain 9 (AGAP9), mRNA.
ACCESSION   NM_001190810 XM_001716810
VERSION     NM_001190810.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC171845.1 and BC171847.1.
            
            On Jul 1, 2010 this sequence version replaced XM_001716810.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC171845.1, SRR1803614.362149.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000452145.6/ ENSP00000392206.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1459              BC171845.1         1-1459
            1460-2287           BC171847.1         1829-2656
            2288-2363           BC171845.1         2288-2363
            2364-2387           BC171847.1         2733-2756
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
                     /map="10q11.22"
     gene            1..2387
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /note="ArfGAP with GTPase domain, ankyrin repeat and PH
                     domain 9"
                     /db_xref="GeneID:642517"
                     /db_xref="HGNC:HGNC:23463"
     exon            1..335
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..2089
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /note="centaurin-gamma-like family member 6"
                     /codon_start=1
                     /product="arf-GAP with GTPase, ANK repeat and PH
                     domain-containing protein 9"
                     /protein_id="NP_001177739.1"
                     /db_xref="CCDS:CCDS73125.1"
                     /db_xref="GeneID:642517"
                     /db_xref="HGNC:HGNC:23463"
                     /translation="MGNILTCRVHPSVSLEFDQQQGSVCPSESEIYEAGAEDRMAGAP
                     MAAAVQPAEVTVEVGEDLHMHQVRDREMPEALEFNLSANPEASTIFQRNSQTDALEFN
                     SSANPEASTIFQRNSQTDVVEIRRSNCTNHVSTERFSQQYSSCSTIFLDDSTAIQHYL
                     TMTIISVTLEIPHHITQRDADRSLSIPDEQLHSFAVSTVHIMKKRNGGGSLNNYSSSI
                     PPTPSTSQEDPQFSVPPTANTPTPVCKRSMRWSNLFTSEKGSDPDKERKAPENHADTI
                     GSGRAIPIKQGMLLKRSGKWLKTWKKKYVTLCSNGVLTYYSSLGDYMKNIHKKEIDLR
                     TSTIKVPGKWPSLATSACAPISSSKSNGLSKDMDTGLGDSICFSPGISSTTSPKLNPP
                     PSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQSQILASLQSCK
                     SSKSKSQLTSQSEAMALQSIQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRS
                     FGTRLSRVRSLELDDWPVELRKVMSSIGNELANSIWEGSSQGQTKPSIKSTREEKEWW
                     IRSKYEEKLFLAPLPCTELSLGQQLLRATTDEDLQTAILLLAHGSREEVNETCGEGDG
                     CTALHLACRKGNVVLEQLLTGWTSWPEMPTGTQR"
     exon            336..404
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     exon            405..473
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     exon            474..508
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     exon            509..609
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     exon            610..645
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     exon            646..697
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
     exon            698..2387
                     /gene="AGAP9"
                     /gene_synonym="AGAP-9; bA301J7.2; CTGLF6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcgggaaga ccatctctgc aagtgcagca tagcctcggc ctaggacagc gggagtgcgt
       61 ggccaaagct gtgagcagag gcacaggtgg tggcagacag tagaggcgcc ccatggggaa
      121 catactgacc tgtcgtgtgc accctagcgt cagcctcgag tttgaccagc agcaggggtc
      181 ggtgtgtccc tctgaatctg agatctatga ggcaggagct gaggacagga tggcaggagc
      241 gcccatggct gctgctgtac agcctgctga ggtgactgtt gaagttggtg aggacctcca
      301 catgcaccag gttcgtgacc gggagatgcc tgaagctttg gagtttaacc tttctgccaa
      361 tccagaggca agcacaatat tccagaggaa ctctcaaaca gatgctttgg agtttaactc
      421 ttctgccaat ccagaggcaa gcacaatatt ccagaggaac tctcaaacag atgttgtaga
      481 aataagaaga agcaactgta caaaccatgt atctactgag cgtttcagtc aacaatacag
      541 ctcgtgttcg acaatattcc ttgatgacag cacagccatc cagcattatc ttacaatgac
      601 aataatatct gtgaccttgg agatacctca tcatatcaca caaagagatg cagatagatc
      661 tttgagcata cctgatgaac agttacactc atttgcggtt tccaccgtgc acattatgaa
      721 gaaaagaaat ggaggtggga gtttaaataa ctattcctcc tccattccac cgactcccag
      781 caccagccag gaggaccctc agttcagtgt tcctcccact gccaacacac ccacccccgt
      841 ttgcaagcgg tccatgcgct ggtccaacct gtttacatct gagaaaggga gtgacccaga
      901 caaagagagg aaagccccgg agaatcatgc tgacaccatc gggagcggca gagccatccc
      961 cattaaacag ggcatgctct taaagcgaag tggaaaatgg ctgaagacat ggaaaaagaa
     1021 atacgtcacc ctgtgttcca atggcgtgct cacctattat tcaagcttag gtgattatat
     1081 gaagaatatt cataaaaaag agattgacct tcggacatct accatcaaag tcccaggaaa
     1141 gtggccatcc ctagccacat cagcctgtgc acccatctcc agctctaaaa gcaatggcct
     1201 atccaaggac atggacaccg ggctgggtga ctccatatgc ttcagccccg gtatctccag
     1261 caccaccagc cccaagctca acccgccccc ctctcctcat gccaataaaa agaaacacct
     1321 aaagaagaaa agcaccaaca actttatgat tgtgtctgcc actggccaaa cgtggcactt
     1381 tgaagccacg acgtatgagg agcgggatgc ctgggtccaa gccatccaga gccagatcct
     1441 ggccagcctg cagtcatgca agagcagtaa aagcaagtcc cagctgacca gccagagtga
     1501 ggccatggcc ctgcagtcga tccaaaacat gcgtgggaac gcccactgtg tggactgtga
     1561 gacccagaat cctaagtggg ccagtttgaa cttgggagtc ctcatgtgta ttgaatgctc
     1621 aggtatccac cgcagttttg gcacccgcct ttcccgtgtg cgatctctgg agctggatga
     1681 ctggccagtt gagctcagga aggttatgtc atctattggc aatgagctag ccaacagcat
     1741 ctgggaaggg agcagccagg ggcagacaaa accctcaata aagtccacga gggaagagaa
     1801 ggaatggtgg atccgttcca aatatgagga gaagctcttt ctggccccac taccctgcac
     1861 tgagctgtcc ctgggccagc agctgctgcg ggccaccact gatgaggacc tgcagacagc
     1921 catcctgctg ctggcacatg gctcccgtga ggaggtgaac gagacctgtg gggagggaga
     1981 cggctgcacg gcactccatc tggcctgccg caaggggaat gtggtcctgg agcagctcct
     2041 gacggggtgg acgtcatggc ccgagatgcc cacgggaaca cagcgctgac ctacgcccgg
     2101 caggcctcca gccaggagtg catcaacgtg cttctgcagt acggctgccc cgacgagtgc
     2161 gtgtagtatc tgttttattt gactgcagtc tccttggtgc aaaaacaaaa tgggaaaaat
     2221 aaggataact cagaatttca aaaggaaatc acaaattcag ctagtaatag cattttcagt
     2281 acttttcgta aactaagtaa atacacaaaa tgttgatttt tctgaccata agacatattt
     2341 tatgtccttt tgccaaggtg gatgtgttag tctcaggccc tcctggc
//
