LOCUS       NM_001039844            3370 bp    mRNA    linear   PRI 02-APR-2024
DEFINITION  Homo sapiens acyl-CoA binding domain containing 7 (ACBD7), mRNA.
ACCESSION   NM_001039844 XM_928013 XM_939125
VERSION     NM_001039844.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Lanfray,D. and Richard,D.
  TITLE     Emerging Signaling Pathway in Arcuate Feeding-Related Neurons: Role
            of the Acbd7
  JOURNAL   Front Neurosci 11, 328 (2017)
   PUBMED   28690493
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3370)
  AUTHORS   Comuzzie,A.G., Cole,S.A., Laston,S.L., Voruganti,V.S., Haack,K.,
            Gibbs,R.A. and Butte,N.F.
  TITLE     Novel genetic loci identified for the pathophysiology of childhood
            obesity in the Hispanic population
  JOURNAL   PLoS One 7 (12), e51954 (2012)
   PUBMED   23251661
REFERENCE   4  (bases 1 to 3370)
  AUTHORS   Deloukas,P., Earthrowl,M.E., Grafham,D.V., Rubenfield,M.,
            French,L., Steward,C.A., Sims,S.K., Jones,M.C., Searle,S.,
            Scott,C., Howe,K., Hunt,S.E., Andrews,T.D., Gilbert,J.G.,
            Swarbreck,D., Ashurst,J.L., Taylor,A., Battles,J., Bird,C.P.,
            Ainscough,R., Almeida,J.P., Ashwell,R.I., Ambrose,K.D.,
            Babbage,A.K., Bagguley,C.L., Bailey,J., Banerjee,R., Bates,K.,
            Beasley,H., Bray-Allen,S., Brown,A.J., Brown,J.Y., Burford,D.C.,
            Burrill,W., Burton,J., Cahill,P., Camire,D., Carter,N.P.,
            Chapman,J.C., Clark,S.Y., Clarke,G., Clee,C.M., Clegg,S., Corby,N.,
            Coulson,A., Dhami,P., Dutta,I., Dunn,M., Faulkner,L., Frankish,A.,
            Frankland,J.A., Garner,P., Garnett,J., Gribble,S., Griffiths,C.,
            Grocock,R., Gustafson,E., Hammond,S., Harley,J.L., Hart,E.,
            Heath,P.D., Ho,T.P., Hopkins,B., Horne,J., Howden,P.J., Huckle,E.,
            Hynds,C., Johnson,C., Johnson,D., Kana,A., Kay,M., Kimberley,A.M.,
            Kershaw,J.K., Kokkinaki,M., Laird,G.K., Lawlor,S., Lee,H.M.,
            Leongamornlert,D.A., Laird,G., Lloyd,C., Lloyd,D.M., Loveland,J.,
            Lovell,J., McLaren,S., McLay,K.E., McMurray,A.,
            Mashreghi-Mohammadi,M., Matthews,L., Milne,S., Nickerson,T.,
            Nguyen,M., Overton-Larty,E., Palmer,S.A., Pearce,A.V., Peck,A.I.,
            Pelan,S., Phillimore,B., Porter,K., Rice,C.M., Rogosin,A.,
            Ross,M.T., Sarafidou,T., Sehra,H.K., Shownkeen,R., Skuce,C.D.,
            Smith,M., Standring,L., Sycamore,N., Tester,J., Thorpe,A.,
            Torcasso,W., Tracey,A., Tromans,A., Tsolas,J., Wall,M., Walsh,J.,
            Wang,H., Weinstock,K., West,A.P., Willey,D.L., Whitehead,S.L.,
            Wilming,L., Wray,P.W., Young,L., Chen,Y., Lovering,R.C.,
            Moschonas,N.K., Siebert,R., Fechtel,K., Bentley,D., Durbin,R.,
            Hubbard,T., Doucette-Stamm,L., Beck,S., Smith,D.R. and Rogers,J.
  TITLE     The DNA sequence and comparative analysis of human chromosome 10
  JOURNAL   Nature 429 (6990), 375-381 (2004)
   PUBMED   15164054
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK095538.1, AL590365.14 and BX114172.1.
            
            On Nov 22, 2018 this sequence version replaced NM_001039844.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1803617.261578.1,
                                           SRR1660809.90022.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2157437, SAMEA2158188
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000356189.6/ ENSP00000367453.4
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-805               AK095538.1         1-805
            806-3148            AL590365.14        37929-40271         c
            3149-3370           BX114172.1         14-235              c
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="10"
                     /map="10p13"
     gene            1..3370
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /note="acyl-CoA binding domain containing 7"
                     /db_xref="GeneID:414149"
                     /db_xref="HGNC:HGNC:17715"
     exon            1..60
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..315
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /note="acyl-Coenzyme A binding domain containing 7"
                     /codon_start=1
                     /product="acyl-CoA-binding domain-containing protein 7"
                     /protein_id="NP_001034933.1"
                     /db_xref="CCDS:CCDS31153.1"
                     /db_xref="GeneID:414149"
                     /db_xref="HGNC:HGNC:17715"
                     /translation="MALQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIA
                     CPGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYGI"
     exon            61..178
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /inference="alignment:Splign:2.1.0"
     exon            179..241
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /inference="alignment:Splign:2.1.0"
     exon            242..3370
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3345..3350
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /note="hexamer: ATTAAA"
     polyA_site      3370
                     /gene="ACBD7"
                     /gene_synonym="bA455B2.2"
                     /note="major polyA site"
ORIGIN      
        1 agagcaccgg acgacaacag cagcagcaac aacgcggcag ccgccaccat ggccctgcag
       61 gctgattttg acagggctgc agaagatgtg aggaagctga aagcaagacc agatgatgga
      121 gaactgaaag aactctatgg gctttacaaa caagcaatag ttggagacat taatattgcg
      181 tgtccaggaa tgctagattt aaaaggcaaa gccaaatggg aagcatggaa cctcaaaaaa
      241 gggttgtcga cggaagatgc gacgagtgcc tatatttcta aagcaaagga gctgatagaa
      301 aaatacggaa tttagaatac agcatatgag gaatttttcc ttttgaagac ttccaaatgc
      361 tatcatgacc taacatttag agggagaggc atactgttaa cttgatgtat catgtatatt
      421 tttgctatta gcatgagctg tagtacttag aagtatactg aaactacata gttaactcaa
      481 ttgtacttgc ttaaaccagg tgtctttaaa agttcttttt aagaaaatgt ggcacatata
      541 caccatggaa tactatggag ccataaaaag ggatgagttc atgtcctttg cagggacatg
      601 gatgaagctg gaaaccatca ttctcagcaa actatcacaa gatcagaaaa ccaagcatgt
      661 tctcactcat aagtgggagt tgaacaatga gaacacatgg acacagggaa gggaacatca
      721 cacactgggg cctgtcgggg actagggggt taggggaggg ataacattag gagacatacc
      781 tgatgtaggt gaccggttga tgggtacagc aaaccaccat ggcacatgta tacctatgta
      841 acaaaactgc acgttctgca tatgtatccc agaacttaaa gtataaaaaa aaaaattctt
      901 ttagaaaagt attttttatt tttatagagt tagggagtac agttgcagtt tttgtttgtt
      961 tgtttgtttt ttcttgagga gtctcactct gtcacccagg ctggagtgca gtcgtgtgat
     1021 ctcggttcac tgcaacctcc gcctcctggg ttcaagtgat tctcttgcct cagcctcccg
     1081 agtagctggg attacaggtg cttgccacca tggctggcta atttttgtat ttttagtaga
     1141 gacggggttt tgccatgttg gccaggctgg tctcgaactc ctgacctcag gtgatctgcc
     1201 caccttggcg ctggggttgc aggtgtgagc caccacacct ggtcacaggt gcagttttgt
     1261 tacatggata tattgtgtag tggggaaatc tgggctttta gtgtaaccat caccaaaata
     1321 ctgtacattg tacccaaaag gtaattgctc atccctcacc ccctcccacc tttccaagcc
     1381 tccagtgtct attattccac actccatgac cctgtataca ccctgtttaa ctcccactta
     1441 taagtgaaaa catgtggtat ttttttttgt ttctgagggt tctttaaaaa tctttatttt
     1501 cttatttttt tctgagttgt ttcacttaag ataatagcct ccagttccac ccacgttgct
     1561 gcaaaagccg taatttcatt ctctttatat ggctgagtaa tatcccctgg tatacatata
     1621 caacgttttc tttatcccat catctgctga tggatactta ggttgattcc atatctttgc
     1681 tcttgtgaat tgtgctgcaa tagatataca agtgcaggta tcttttggat agaatgattt
     1741 attttccttt aagaagatac ccagtagtgg gattgctggg tagaatggta gttctatttt
     1801 tagttccatg agaaatttcc gtgctgtttt tcatagaggt tgtactaatt tacattccca
     1861 ccaatagtgt ataagcattc ccttttctcc acatctgttg ttttttgact ttttagaaag
     1921 tctagccctg gtaatatgtg tacagatttg aacagctgtt tgttcttttg gctcatctgt
     1981 tctgttacaa taagttaatg ttactggtga aataaaaaca ggttattaag aatcaatggc
     2041 aaggctgagc gtggtggctc acgcctctaa tctcagcact ttgggaggcc gaggtaggtg
     2101 gattactgag gtcagaagtt cgagaccagc ctgaccaaca ttgcaaaacc ccatctctac
     2161 taaaaataca aaaattagcc agccattggt ggtgcacacc tgtaattcca gctacttggg
     2221 aggctgaggc aggagaattg cttttaccca ggagatggag gttgcagtga gccaagatca
     2281 caccactgca ctccagcctg ggcgacaaaa caagactccg tctcaaaaaa aaaaaaaaaa
     2341 attacaagtc tgtccatagc agtttaaaga aatttaaaaa gcccccatag gaatatctat
     2401 ttttctttaa atttttacat ttaagacatt taagacaaaa aggcaaacta aaatgtatct
     2461 agtgataaac tgtaccacta ctgtacccca tatgttcagt tctatctgag taaaaataga
     2521 gtctggaata taatattggc cccctactca gtctttctgg atggtacaca ggctctttga
     2581 aagaagacag tctcatgtta acaattcaaa aaattgtttg agatccctta agataaatat
     2641 cccccaaaac agtgtacctc tattccctgc ataaaaattt agatttggaa tggtatgacc
     2701 agaggaatag atccacttca tgttactaca acaacaaaac tatctaggtc tgctagatga
     2761 atttccaggg aattatgctg agcagaaaaa gccagtcccc aaatgtgaca tgtataattc
     2821 catttatata acattctttt tcttttcttt tttttttttt ttttttttgt tgagacaggc
     2881 tgtcactctg ttacccaggc tggagcgcag tggcacgctc tcggctcact gcaacctctg
     2941 cctcccaggg tcaagcaatc ctcccatctc agcctccaga gtagctggga ctacaggtgc
     3001 gtgcaaccat gcccagctaa tttttgtatt tttcatagag acagggtttc accatgttgc
     3061 ccaggctggt ctggaactcc tgatctgagg tgatctaccc accttggccc cccaaagtgc
     3121 tgagactata ggcatgagcc accgcgtcca gccaggattc ttgaaaggga acatttatag
     3181 acgcaaagga tggaatagtg gttgccaggg aggagggagg tgggtgtggc tttaaaaggg
     3241 cagcaggagg gatgatcctg cagtgatgga atgttctgtc ttgattgtag caacaccaat
     3301 atgctgattg tgatattata ctatagtttt gcataacagt taccattaaa ggaaattggg
     3361 taaaaggcta
//
