LOCUS       NM_005692               2224 bp    mRNA    linear   PRI 25-JUN-2023
DEFINITION  Homo sapiens ABCF2-H2BK1 readthrough (ABCF2-H2BK1), transcript
            variant 1, mRNA.
ACCESSION   NM_005692
VERSION     NM_005692.5
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AC021097.5.
            
            On Feb 27, 2020 this sequence version replaced NM_005692.4.
            
            Summary: This gene represents readthrough transcription between
            ABCF2 and a downstream histone H2B-like gene. [provided by RefSeq,
            Mar 2019].
            
            Transcript Variant: This variant (1) represents the protein-coding
            transcript.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR11853566.26124.1,
                                           SRR14038193.3592204.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            readthrough transcript :: includes exons from GeneID 10061,
                                      114483833
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                AC021097.5         14190-14232
            44-239              AC021097.5         14895-15090
            240-452             AC021097.5         16407-16619
            453-635             AC021097.5         17281-17463
            636-807             AC021097.5         17546-17717
            808-903             AC021097.5         18779-18874
            904-1006            AC021097.5         19715-19817
            1007-1102           AC021097.5         22236-22331
            1103-1222           AC021097.5         22522-22641
            1223-1312           AC021097.5         22745-22834
            1313-1423           AC021097.5         23204-23314
            1424-1486           AC021097.5         25366-25428
            1487-1615           AC021097.5         25663-25791
            1616-1819           AC021097.5         26313-26516
            1820-1953           AC021097.5         27204-27337
            1954-2224           AC021097.5         33288-33558
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7q36.1"
     gene            1..2224
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /note="ABCF2-H2BK1 readthrough"
                     /db_xref="GeneID:114483834"
                     /db_xref="HGNC:HGNC:54751"
     exon            1..43
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            44..239
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..1990
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /note="ABCF2-H2B readthrough; ABCF2-H2BE1 readthrough"
                     /codon_start=1
                     /product="ABCF2-H2B protein"
                     /protein_id="NP_005683.2"
                     /db_xref="CCDS:CCDS5922.1"
                     /db_xref="GeneID:114483834"
                     /db_xref="HGNC:HGNC:54751"
                     /translation="MPSDLAKKKAAKKKEAAKARQRPRKGHEENGDVVTEPQVAEKNE
                     ANGRETTEVDLLTKELEDFEMKKAAARAVTGVLASHPNSTDVHIINLSLTFHGQELLS
                     DTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSDKTPLH
                     CVMEVDTERAMLEKEAERLAHEDAECEKLMELYERLEELDADKAEMRASRILHGLGFT
                     PAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKR
                     ILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLELEENQMKRFHWEQDQ
                     IAHMKNYIARFGHGSAKLARQAQSKEKTLQKMMASGLTERVVSDKTLSFYFPPCGKIP
                     PPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTGELLPT
                     DGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGK
                     QQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGM
                     MLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKLVDEEPQLTKRTHNVC
                     TLTLASLPRP"
     exon            240..452
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            453..635
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            636..807
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            808..903
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            904..1006
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1102
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1103..1222
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1312
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1423
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1424..1486
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1487..1615
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1616..1819
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1820..1953
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     exon            1954..2224
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2207..2212
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /note="hexamer: AATAAA"
     polyA_site      2224
                     /gene="ABCF2-H2BK1"
                     /gene_synonym="ABCF2-H2BE1"
                     /note="major polyA site"
ORIGIN      
        1 aaggagcagc tctgttgcga cataggccga gcagcgaggc ccagctccct gaaacaacag
       61 taacctaccc ctgtgggtca tcatcatgcc ctccgacctg gccaagaaga aggcagccaa
      121 aaagaaggag gctgccaaag ctcgacagcg gcccagaaaa ggacatgaag aaaatggaga
      181 tgttgtcaca gaaccacagg tggcagagaa gaatgaggcc aatggcagag agaccacaga
      241 agtagatttg ctgaccaagg agctagagga ctttgagatg aagaaagctg ctgctcgagc
      301 tgtcactggc gtcctggcct ctcaccccaa cagtactgat gttcacatca tcaacctctc
      361 acttaccttt catggtcaag agctgctcag tgacaccaaa ctggaattaa actcaggccg
      421 tcgttatggc ctcattggtt taaatggaat tggaaagtcc atgctgctct ctgctattgg
      481 gaagcgtgaa gtgcccatcc ctgagcacat cgacatctac catctgactc gagagatgcc
      541 ccctagtgac aagacaccct tgcattgtgt gatggaagtc gacacagagc gggccatgct
      601 ggagaaagag gcagagcggc tggctcatga ggatgcggag tgtgagaagc tcatggagct
      661 ctacgagcgc ctggaggagc tggatgccga caaggcagag atgagggcct cgcggatctt
      721 gcatggactg ggtttcacac ctgccatgca gcgcaagaag ctaaaagact tcagtggggg
      781 ctggaggatg agggttgccc ttgccagagc cctctttatt cggcccttca tgctgctcct
      841 ggatgagcct accaaccacc tggacctaga tgcttgcgtg tggttggaag aagaactaaa
      901 aacttttaag cgcatcttgg tcctcgtctc ccattcccag gattttctga atggtgtctg
      961 taccaatatc attcacatgc acaacaagaa actgaagtat tatacgggta attatgatca
     1021 gtacgtgaag acgcggctag agctggagga gaaccagatg aagaggtttc actgggagca
     1081 agatcagatt gcacacatga agaactacat tgcgaggttt ggtcatggca gtgccaagct
     1141 ggcccggcag gcccagagca aggagaagac gctacagaaa atgatggcat caggactgac
     1201 agagagggtc gtgagcgata agacactgtc attttatttc ccaccatgtg gcaagatccc
     1261 tccacctgtc attatggtgc aaaatgtgag cttcaagtat acaaaagatg ggccttgcat
     1321 ctacaataat ctagaatttg gaattgacct tgacacacga gtggctctgg tagggcccaa
     1381 tggagcaggg aagtcaactc ttctgaagct gctaactgga gagctactac ccacagatgg
     1441 catgatccga aaacactctc atgtcaagat agggcgttac catcagcatt tacaagagca
     1501 gctggactta gatctctcac ctttggagta catgatgaag tgctacccag agatcaagga
     1561 gaaggaagaa atgaggaaga tcattgggcg atacggtctc actgggaaac aacaggtgag
     1621 cccaatccgg aacttgtcag acgggcagaa gtgccgagtg tgtctggcct ggctggcctg
     1681 gcagaacccc cacatgctct tcctggatga acccaccaat cacctggata tcgagaccat
     1741 cgacgccctg gcagatgcca tcaatgagtt tgagggtggt atgatgctgg tcagccatga
     1801 cttcagactc attcagcagg ttgcacagga aatttgggtc tgtgagaagc agacaatcac
     1861 caagtggcct ggagacatcc tggcttacaa ggagcacctc aagtccaagc tggtggatga
     1921 ggagccccag ctcaccaaga ggacccacaa cgtgtgcacc ctgacattgg catctctgcc
     1981 aaggccatga gcatcatgaa ctcgtttgta aacgacgtgt ttgagcagct ggcgtgtgag
     2041 gctgcccggc tggcccagta ctcgggccgg accaccctga catcccgaga agtccagacg
     2101 gctgtgcgtc tgctgctgcc tggggagctg gccaagcacg ctgtgtctga gggcaccaag
     2161 gctgtcacca agtacaccag ctccaagtga cccagggcct gacaaaaata aagggtgaac
     2221 tgtt
//
